Works by Alexandre de Kochko

Results: 24

The 'PUCE CAFE' Project: the First 15K Coffee Microarray, a New Tool for Discovering Candidate Genes correlated to Agronomic and Quality Traits.

Published in:

BMC Genomics, 2011, v. 12, n. 1, p. 1, doi. 10.1186/1471-2164-12-5

By:

Privat, Isabelle;
Bardil, Amélie;
Gomez, Aureliano Bombarely;
Severac, Dany;
Dantec, Christelle;
Fuentes, Ivanna;
Mueller, Lukas;
Joët, Thierry;
Pot, David;
Foucrier, Séverine;
Dussert, Stéphane;
Leroy, Thierry;
Journot, Laurent;
de Kochko, Alexandre;
Campa, Claudine;
Combes, Marie-Christine;
Lashermes, Philippe;
Bertrand, Benoit

Publication type:

Article

Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites.

Published in:

Annals of Botany, 2013, v. 111, n. 2, p. 229, doi. 10.1093/aob/mcs283

By:

Razafinarivo, Norosoa J.;
Guyot, Romain;
Davis, Aaron P.;
Couturon, Emmanuel;
Hamon, Serge;
Crouzillat, Dominique;
Rigoreau, Michel;
Dubreuil-Tranchant, Christine;
Poncet, Valerie;
De Kochko, Alexandre;
Rakotomalala, Jean-Jacques;
Hamon, Perla

Publication type:

Article

Adaptive potential of Coffea canephora from Uganda in response to climate change.

Published in:

Molecular Ecology, 2022, v. 31, n. 6, p. 1800, doi. 10.1111/mec.16360

By:

de Aquino, Sinara Oliveira;
Kiwuka, Catherine;
Tournebize, Rémi;
Gain, Clément;
Marraccini, Pierre;
Mariac, Cédric;
Bethune, Kévin;
Couderc, Marie;
Cubry, Philippe;
Andrade, Alan C.;
Lepelley, Maud;
Darracq, Olivier;
Crouzillat, Dominique;
Anten, Niels;
Musoli, Pascal;
Vigouroux, Yves;
de Kochko, Alexandre;
Manel, Stéphanie;
François, Olivier;
Poncet, Valérie

Publication type:

Article

Characterization of the protease domain of Rice tungro bacilliform virus responsible for the processing of the capsid protein from the polyprotein.

Published in:

Virology Journal, 2005, v. 2, p. 33, doi. 10.1186/1743-422X-2-33

By:

Marmey, Philippe;
Rojas-Mendoza, Ana;
De Kochko, Alexandre;
Beachy, Roger N.;
Fauquet, Claude M.

Publication type:

Article

Structure and Distribution of Centromeric Retrotransposons at Diploid and Allotetraploid Coffea Centromeric and Pericentromeric Regions.

Published in:

Frontiers in Plant Science, 2018, p. 1, doi. 10.3389/fpls.2018.00175

By:

de Castro Nunes, Renata;
Orozco-Arias, Simon;
Crouzillat, Dominique;
Mueller, Lukas A.;
Strickler, Suzy R.;
Descombes, Patrick;
Fournier, Coralie;
Moine, Deborah;
de Kochko, Alexandre;
Yuyama, Priscila M.;
Vanzela, André L. L.;
Guyot, Romain

Publication type:

Article

Micro-collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species ( Coffea).

Published in:

Plant Journal, 2011, v. 67, n. 2, p. 305, doi. 10.1111/j.1365-313X.2011.04590.x

By:

Yu, Qingyi;
Guyot, Romain;
de Kochko, Alexandre;
Byers, Anne;
Navajas-Pérez, Rafael;
Langston, Brennick J.;
Dubreuil-Tranchant, Christine;
Paterson, Andrew H.;
Poncet, Valérie;
Nagai, Chifumi;
Ming, Ray

Publication type:

Article

Two disjunct Pleistocene populations and anisotropic postglacial expansion shaped the current genetic structure of the relict plant Amborella trichopoda.

Published in:

PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0183412

By:

Tournebize, Rémi;
Manel, Stéphanie;
Vigouroux, Yves;
Munoz, François;
de Kochko, Alexandre;
Poncet, Valérie

Publication type:

Article

Expression and inheritance of multiple transgenes in rice plants.

Published in:

Nature Biotechnology, 1998, v. 16, n. 11, p. 1060, doi. 10.1038/3511

By:

Chen, Lili;
Marmey, Philippe;
Taylor, Nigel J.;
Brizard, Jean-Paul;
Espinoza, Celia;
D'Cruz, Patricia;
Huet, Hervé;
Zhang, Shiping;
Kochko, Alexandre de;
Beachy, Roger N.;
Fauquet, Claude M.

Publication type:

Article

Development of genomic microsatellite markers in Coffea canephora and their transferability to other coffee species.

Published in:

Genome, 2007, v. 50, n. 12, p. 1156, doi. 10.1139/G07-073

By:

Poncet, Valérie;
Dufour, Magali;
Hamon, Perla;
Hamon, Serge;
De Kochko, Alexandre;
Leroy, Thierry

Publication type:

Article

Metabolic pathways in tropical dicotyledonous albuminous seeds: Coffea arabica as a case study.

Published in:

2009

By:

Joët, Thierry;
Laffargue, Andréina;
Salmona, Jordi;
Doulbeau, Sylvie;
Descroix, Frédéric;
Bertrand, Benoît;
de Kochko, Alexandre;
Dussert, Stéphane

Publication type:

Case Study

MICROSATELLITE MARKERS FOR AMBORELLA (AMBORELLACEAE), A MONOTYPIC GENUS ENDEMIC TO NEW CALEDONIA.

Published in:

American Journal of Botany, 2012, v. 99, n. 10, p. e411, doi. 10.3732/ajb.1200131

By:

Poncet, Valérie;
Couderc, Marie;
Tranchant-Dubreuil, Christine;
Gomez, Céline;
Hamon, Perla;
Hamon, Serge;
Pillon, Yohan;
Munzinger, Jérôme;
De Kochko, Alexandre

Publication type:

Article

AN EFFICIENT AND RAPID PROTOCOL FOR PLANT NUCLEAR DNA PREPARATION SUITABLE FOR NEXT GENERATION SEQUENCING METHODS.

Published in:

American Journal of Botany, 2011, v. 98, n. 1, p. e13, doi. 10.3732/ajb.1000371

By:

CARRIER, GREGORY;
SANTONI, SYLVAIN;
RODIER-GOUD, MARGUERITE;
CANAGUIER, AURÉLIE;
DE KOCHKO, ALEXANDRE;
DUBREUIL-TRANCHANT, CHRISTINE;
THIS, PATRICE;
BOURSIQUOT, JEAN-MICHEL;
LE CUNFF, LOÏC

Publication type:

Article

Site-Specific Insertion Polymorphism of the MITE Alex-1 in the Genus Coffea Suggests Interspecific Gene Flow.

Published in:

International Journal of Evolutionary Biology, 2011, v. 2011, p. 1, doi. 10.4061/2011/358412

By:

Dubreuil-Tranchant, Christine;
Guyot, Romain;
Guellim, Amira;
Duret, Caroline;
de la Mare, Marion;
Razafinarivo, Norosoa;
Poncet, Valérie;
Hamon, Serge;
Hamon, Perla;
de Kochko, Alexandre

Publication type:

Article

Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes.

Published in:

BMC Plant Biology, 2009, v. 9, p. 1, doi. 10.1186/1471-2229-9-22

By:

Guyot, Romain;
de la Mare, Marion;
Viader, Véronique;
Hamon, Perla;
Coriton, Olivier;
Bustamante-Porras, José;
Poncet, Valérie;
Campa, Claudine;
Hamon, Serge;
de Kochko, Alexandre

Publication type:

Article

The Amborella vacuolar processing enzyme family.

Published in:

Frontiers in Plant Science, 2015, p. 1, doi. 10.3389/fpls.2015.00618

By:

Poncet, Valérie;
Tournebize, Rémi;
de Kochko, Alexandre;
Scutt, Charlie;
Villegente, Matthieu;
Sarramegna-Burtet, Valérie;
Cueff, Gwendal;
Rajjou, Loïc;
Job, Dominique;
Balliau, Thierry;
Zivy, Michel;
Fogliani, Bruno;
Job, Claudette

Publication type:

Article

Terminal-Repeat Retrotransposons with GAG Domain in Plant Genomes: A New Testimony on the Complex World of Transposable Elements.

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 2, p. 493, doi. 10.1093/gbe/evv001

By:

Chaparro, Cristian;
Gayraud, Thomas;
de Souza, Rogerio Fernandes;
Domingues, Douglas Silva;
Akaffou, Sélastique;
Laforga Vanzela, Andre Luis;
Kochko, Alexandre de;
Rigoreau, Michel;
Crouzillat, Dominique;
Hamon, Serge;
Hamon, Perla;
Guyot, Romain

Publication type:

Article

Favourable habitats for Coffea inter-specific hybridization in central New Caledonia: combined genetic and spatial analyses.

Published in:

Journal of Applied Ecology, 2010, v. 47, n. 1, p. 85, doi. 10.1111/j.1365-2664.2009.01762.x

By:

Gomez, Céline;
Batti, Ahmed;
Le Pierrès, Daniel;
Campa, Claudine;
Hamon, Serge;
de Kochko, Alexandre;
Hamon, Perla;
Huynh, Frédéric;
Despinoy, Marc;
Poncet, Valérie

Publication type:

Article

Deciphering transcriptional networks that govern Coffea arabica seed development using combined cDNA array and real-time RT-PCR approaches.

Published in:

Plant Molecular Biology, 2008, v. 66, n. 1-2, p. 105, doi. 10.1007/s11103-007-9256-6

By:

Jordi Salmona;
Alexandre de Kochko;
BenoÃ®t Bertrand;
Thierry JoÃ«t

Publication type:

Article

Functional characterization of two p -coumaroyl ester 3′-hydroxylase genes from coffee tree: evidence of a candidate for chlorogenic acid biosynthesis.

Published in:

Plant Molecular Biology, 2007, v. 64, n. 1-2, p. 145

By:

Rachel Million-Rousseau;
Pascaline Ullmann;
Nathalie Chabrillange;
José Bustamante;
Laurence Mondolot;
Marc Morant;
Michel Noirot;
Serge Hamon;
Alexandre de Kochko;
Danièle Werck-Reichhart;
Claudine Campa

Publication type:

Article

Evolution in Caffeoylquinic Acid Content and Histolocalization During Coffea canephora Leaf Development.

Published in:

Annals of Botany, 2006, v. 98, n. 1, p. 33, doi. 10.1093/aob/mcl080

By:

MONDOLOT, LAURENCE;
LA FISCA, PHILIPPE;
BUATOIS, BRUNO;
TALANSIER, EMELINE;
DE KOCHKO, ALEXANDRE;
CAMPA, CLAUDINE

Publication type:

Article

Investigation on the Causes of Stoichiometric Error in Genome Size Estimation Using Heat Experiments: Consequences on Data Interpretation.

Published in:

Annals of Botany, 2005, v. 95, n. 1, p. 111, doi. 10.1093/aob/mci006

By:

NOIROT, MICHEL;
BARRE, PHILIPPE;
DUPERRAY, CHRISTOPHE;
HAMON, SERGE;
DE KOCHKO, ALEXANDRE

Publication type:

Article

Molecular characterization of an ethylene receptor gene (CcETR1) in coffee trees, its relationship with fruit development and caffeine content.

Published in:

Molecular Genetics & Genomics, 2007, v. 277, n. 6, p. 701, doi. 10.1007/s00438-007-0219-z

By:

Bustamante-Porras, José;
Campa, Claudine;
Poncet, Valérie;
Noirot, Michel;
Leroy, Thierry;
Hamon, Serge;
de Kochko, Alexandre

Publication type:

Article

SSR mining in coffee tree EST databases: potential use of EST–SSRs as markers for the Coffea genus.

Published in:

Molecular Genetics & Genomics, 2006, v. 276, n. 5, p. 436, doi. 10.1007/s00438-006-0153-5

By:

Valérie Poncet;
Myriam Rondeau;
Christine Tranchant;
Anne Cayrel;
Serge Hamon;
Alexandre de Kochko;
Perla Hamon

Publication type:

Article

Genetic diversity of native and cultivated Ugandan Robusta coffee (Coffea canephora Pierre ex A. Froehner): Climate influences, breeding potential and diversity conservation.

Published in:

PLoS ONE, 2021, v. 16, n. 2, p. 1, doi. 10.1371/journal.pone.0245965

By:

Kiwuka, Catherine;
Goudsmit, Eva;
Tournebize, Rémi;
de Aquino, Sinara Oliveira;
Douma, Jacob C.;
Bellanger, Laurence;
Crouzillat, Dominique;
Stoffelen, Piet;
Sumirat, Ucu;
Legnaté, Hyacinthe;
Marraccini, Pierre;
de Kochko, Alexandre;
Andrade, Alan Carvalho;
Mulumba, John Wasswa;
Musoli, Pascal;
Anten, Niels P. R.;
Poncet, Valérie

Publication type:

Article