Works by Alberdi, Antton

Results: 39

Plecotus macrobullaris (Chiroptera: Vespertilionidae).

Published in:

Mammalian Species, 2018, v. 50, n. 958, p. 26, doi. 10.1093/mspecies/sey003

By:

ALBERDI, ANTTON;
AIZPURUA, OSTAIZKA

Publication type:

Article

Hologenomic data generation and analysis in wild vertebrates.

Published in:

Methods in Ecology & Evolution, 2025, v. 16, n. 1, p. 97, doi. 10.1111/2041-210X.14456

By:

Pietroni, Carlotta;
Gaun, Nanna;
Leonard, Aoife;
Lauritsen, Jonas;
Martin‐Bideguren, Garazi;
Odriozola, Iñaki;
Aizpurua, Ostaizka;
Alberdi, Antton;
Eisenhofer, Raphael

Publication type:

Article

Impact of microbial genome completeness on metagenomic functional inference.

Published in:

ISME Communications, 2023, v. 3, n. 1, p. 1, doi. 10.1038/s43705-023-00221-z

By:

Eisenhofer, Raphael;
Odriozola, Iñaki;
Alberdi, Antton

Publication type:

Article

Contrasting recovery of metagenome‑assembled genomes and derived bacterial communities and functional profiles from lizard fecal and cloacal samples.

Published in:

Animal Microbiome, 2025, v. 7, n. 1, p. 1, doi. 10.1186/s42523-025-00381-4

By:

Hernández, Mauricio;
Langa, Jorge;
Aizpurua, Ostaizka;
Navarro-Noya, Yendi E.;
Alberdi, Antton

Publication type:

Article

Bacterial topography of the upper and lower respiratory tract in pigs.

Published in:

Animal Microbiome, 2023, v. 5, n. 1, p. 1, doi. 10.1186/s42523-023-00226-y

By:

Pirolo, Mattia;
Espinosa-Gongora, Carmen;
Alberdi, Antton;
Eisenhofer, Raphael;
Soverini, Matteo;
Eriksen, Esben Østergaard;
Pedersen, Ken Steen;
Guardabassi, Luca

Publication type:

Article

Comparative Microbiome Analysis Reveals the Ecological Relationships Between Rumen Methanogens, Acetogens, and Their Hosts.

Published in:

Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.01311

By:

Li, Zhipeng;
Wang, Xiaoxu;
Alberdi, Antton;
Deng, Jiabo;
Zhong, Zhenyu;
Si, Huazhe;
Zheng, Chengli;
Zhou, Hanlin;
Wang, Jianming;
Yang, Yifeng;
Wright, André-Denis G.;
Mao, Shengyong;
Zhang, Zhigang;
Guan, Leluo;
Li, Guangyu

Publication type:

Article

Novel strategies to improve chicken performance and welfare by unveiling host-microbiota interactions through hologenomics.

Published in:

Frontiers in Physiology, 2022, v. 13, p. 1, doi. 10.3389/fphys.2022.884925

By:

Tous, Núria;
Marcos, Sofia;
Goodarzi Boroojeni, Farshad;
Pérez de Rozas, Ana;
Zentek, Jürgen;
Estonba, Andone;
Sandvang, Dorthe;
Gilbert, M. Thomas P.;
Esteve-Garcia, Enric;
Finn, Robert;
Alberdi, Antton;
Tarradas, Joan

Publication type:

Article

Unveiling the factors shaping the distribution of widely distributed alpine vertebrates, using multiscale ecological niche modelling of the bat Plecotus macrobullaris.

Published in:

Frontiers in Zoology, 2014, v. 11, n. 1, p. 1, doi. 10.1186/s12983-014-0077-6

By:

Alberdi, Antton;
Aizpurua, Ostaizka;
Aihartza, Joxerra;
Garin, Inazio

Publication type:

Article

Living above the treeline: roosting ecology of the alpine bat Plecotus macrobullaris.

Published in:

European Journal of Wildlife Research, 2015, v. 61, n. 1, p. 17, doi. 10.1007/s10344-014-0862-8

By:

Alberdi, Antton;
Aihartza, Joxerra;
Aizpurua, Ostaizka;
Salsamendi, Egoitz;
Brigham, R. Mark;
Garin, Inazio

Publication type:

Article

Functional Insights Into the Effect of Feralisation on the Gut Microbiota of Cats Worldwide.

Published in:

Molecular Ecology, 2025, v. 34, n. 6, p. 1, doi. 10.1111/mec.17695

By:

Aizpurua, Ostaizka;
Botnen, Amanda Bolt;
Eisenhofer, Raphael;
Odriozola, Iñaki;
Santos‐Bay, Luisa;
Bjørnsen, Mads Bjørn;
Gilbert, M. Thomas P.;
Alberdi, Antton

Publication type:

Article

Seasonal dietary changes relate to gut microbiota composition depending on the host species but do not correlate with gut microbiota diversity in arthropod‐eating lizards.

Published in:

Molecular Ecology, 2024, v. 33, n. 14, p. 1, doi. 10.1111/mec.17426

By:

Hernández, Mauricio;
Ancona, Sergio;
Hereira‐Pacheco, Stephanie;
Díaz de la Vega‐Pérez, Aníbal H.;
Alberdi, Antton;
Navarro‐Noya, Yendi E.

Publication type:

Article

Fishing Technique of Long-Fingered Bats Was Developed from a Primary Reaction to Disappearing Target Stimuli.

Published in:

PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0167164

By:

Aizpurua, Ostaizka;
Alberdi, Antton;
Aihartza, Joxerra;
Garin, Inazio

Publication type:

Article

Unveiling the Hidden Bat Diversity of a Neotropical Montane Forest.

Published in:

PLoS ONE, 2016, v. 11, n. 10, p. 1, doi. 10.1371/journal.pone.0162712

By:

Chaverri, Gloriana;
Garin, Inazio;
Alberdi, Antton;
Jimenez, Lide;
Castillo-Salazar, Cristian;
Aihartza, Joxerra

Publication type:

Article

DNA metabarcoding reveals seasonal changes in diet composition across four arthropod‐eating lizard species (Phrynosomatidae: Sceloporus).

Published in:

Integrative Zoology, 2024, v. 19, n. 3, p. 480, doi. 10.1111/1749-4877.12755

By:

HERNÁNDEZ, Mauricio;
HEREIRA‐PACHECO, Stephanie;
ALBERDI, Antton;
DÍAZ DE LA VEGA‐PÉREZ, Aníbal H.;
ESTRADA‐TORRES, Arturo;
ANCONA, Sergio;
NAVARRO‐NOYA, Yendi E.

Publication type:

Article

Recovering High‐Quality Host Genomes from Gut Metagenomic Data through Genotype Imputation.

Published in:

Advanced Genetics, 2022, v. 3, n. 3, p. 1, doi. 10.1002/ggn2.202100065

By:

Marcos, Sofia;
Parejo, Melanie;
Estonba, Andone;
Alberdi, Antton

Publication type:

Article

Field and laboratory guidelines for reliable bioinformatic and statistical analysis of bacterial shotgun metagenomic data.

Published in:

Critical Reviews in Biotechnology, 2024, v. 44, n. 6, p. 1164, doi. 10.1080/07388551.2023.2254933

By:

Aizpurua, Ostaizka;
Dunn, Robert R.;
Hansen, Lars H.;
Gilbert, M. T. P.;
Alberdi, Antton

Publication type:

Article

Enriching captivity conditions with natural elements does not prevent the loss of wild‐like gut microbiota but shapes its compositional variation in two small mammals.

Published in:

MicrobiologyOpen, 2022, v. 11, n. 5, p. 1, doi. 10.1002/mbo3.1318

By:

Koziol, Adam;
Odriozola, Iñaki;
Nyholm, Lasse;
Leonard, Aoife;
San José, Carlos;
Pauperio, Joana;
Ferreira, Clara;
Hansen, Anders J.;
Aizpurua, Ostaizka;
Gilbert, M. Thomas P.;
Alberdi, Antton

Publication type:

Article

Scrutinizing key steps for reliable metabarcoding of environmental samples.

Published in:

Methods in Ecology & Evolution, 2018, v. 9, n. 1, p. 134, doi. 10.1111/2041-210X.12849

By:

Alberdi, Antton;
Aizpurua, Ostaizka;
Gilbert, M. Thomas P.;
Bohmann, Kristine

Publication type:

Article

A guide to the application of Hill numbers to DNA‐based diversity analyses.

Published in:

Molecular Ecology Resources, 2019, v. 19, n. 4, p. 804, doi. 10.1111/1755-0998.13014

By:

Alberdi, Antton;
Gilbert, M. Thomas P.

Publication type:

Article

Promises and pitfalls of using high‐throughput sequencing for diet analysis.

Published in:

Molecular Ecology Resources, 2019, v. 19, n. 2, p. 327, doi. 10.1111/1755-0998.12960

By:

Alberdi, Antton;
Aizpurua, Ostaizka;
Gopalakrishnan, Shyam;
Lynggaard, Christina;
Nielsen, Martin;
Bohmann, Kristine;
Gilbert, Marcus Thomas Pius

Publication type:

Article

An integrated framework to identify wildlife populations under threat from climate change.

Published in:

Molecular Ecology Resources, 2018, v. 18, n. 1, p. 18, doi. 10.1111/1755-0998.12694

By:

Razgour, Orly;
Taggart, John B.;
Manel, Stephanie;
Juste, Javier;
Ibáñez, Carlos;
Rebelo, Hugo;
Alberdi, Antton;
Jones, Gareth;
Park, Kirsty

Publication type:

Article

Quantitative Synthesis of Microbe‐Driven Acclimation and Adaptation in Wild Vertebrates.

Published in:

Evolutionary Applications, 2024, v. 17, n. 10, p. 1, doi. 10.1111/eva.70025

By:

Martin Bideguren, Garazi;
Razgour, Orly;
Alberdi, Antton

Publication type:

Article

Going urban: variation in personality traits of an invasive species along an urbanization gradient.

Published in:

Journal of Mammalogy, 2024, v. 105, n. 6, p. 1300, doi. 10.1093/jmammal/gyae077

By:

Tranquillo, Claudia;
Santicchia, Francesca;
Romeo, Claudia;
Bisi, Francesco;
Panzeri, Mattia;
Preatoni, Damiano;
Martinoli, Adriano;
Alberdi, Antton;
Wauters, Lucas A

Publication type:

Article

Gut microbiota differences between paired intestinal wall and digesta samples in three small species of fish.

Published in:

PeerJ, 2022, p. 1, doi. 10.7717/peerj.12992

By:

Nyholm, Lasse;
Odriozola, Iñaki;
Bideguren, Garazi Martin;
Aizpurua, Ostaizka;
Alberdi, Antton

Publication type:

Article

Host‐derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin.

Published in:

Molecular Ecology, 2019, v. 28, n. 2, p. 484, doi. 10.1111/mec.14860

By:

Hooper, Rebecca;
Brealey, Jaelle C.;
Valk, Tom;
Alberdi, Antton;
Durban, John W.;
Fearnbach, Holly;
Robertson, Kelly M.;
Baird, Robin W.;
Bradley Hanson, M.;
Wade, Paul;
Gilbert, M. Thomas P.;
Morin, Phillip A.;
Wolf, Jochen B. W.;
Foote, Andrew D.;
Guschanski, Katerina

Publication type:

Article

Assessing niche partitioning of co‐occurring sibling bat species by DNA metabarcoding.

Published in:

Molecular Ecology, 2018, v. 27, n. 5, p. 1273, doi. 10.1111/mec.14508

By:

Arrizabalaga‐Escudero, Aitor;
Clare, Elizabeth L.;
Salsamendi, Egoitz;
Alberdi, Antton;
Garin, Inazio;
Aihartza, Joxerra;
Goiti, Urtzi

Publication type:

Article

Agriculture shapes the trophic niche of a bat preying on multiple pest arthropods across Europe: Evidence from DNA metabarcoding.

Published in:

Molecular Ecology, 2018, v. 27, n. 3, p. 815, doi. 10.1111/mec.14474

By:

Aizpurua, Ostaizka;
Budinski, Ivana;
Georgiakakis, Panagiotis;
Gopalakrishnan, Shyam;
Ibañez, Carlos;
Mata, Vanessa;
Rebelo, Hugo;
Russo, Danilo;
Szodoray‐Parádi, Farkas;
Zhelyazkova, Violeta;
Zrncic, Vida;
Gilbert, M. Thomas P.;
Alberdi, Antton

Publication type:

Article

Ecology and evolutionary biology of fishing bats.

Published in:

Mammal Review, 2018, v. 48, n. 4, p. 284, doi. 10.1111/mam.12136

By:

Aizpurua, Ostaizka;
Alberdi, Antton

Publication type:

Article

The Contribution of Desert-Dwelling Bats to Pest Control in Hyper-Arid Date Agriculture.

Published in:

Diversity (14242818), 2022, v. 14, n. 12, p. 1034, doi. 10.3390/d14121034

By:

Schäckermann, Jessica;
Morris, Evie J.;
Alberdi, Antton;
Razgour, Orly;
Korine, Carmi

Publication type:

Article

DNA metabarcoding and spatial modelling link diet diversification with distribution homogeneity in European bats.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-14961-2

By:

Alberdi, Antton;
Razgour, Orly;
Aizpurua, Ostaizka;
Novella-Fernandez, Roberto;
Aihartza, Joxerra;
Budinski, Ivana;
Garin, Inazio;
Ibáñez, Carlos;
Izagirre, Eñaut;
Rebelo, Hugo;
Russo, Danilo;
Vlaschenko, Anton;
Zhelyazkova, Violeta;
Zrnčić, Vida;
Gilbert, M. Thomas P.

Publication type:

Article

Fishing Long-Fingered Bats (<i>Myotis capaccinii</i>) Prey Regularly upon Exotic Fish.

Published in:

PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0080163

By:

Aizpurua, Ostaizka;
Garin, Inazio;
Alberdi, Antton;
Salsamendi, Egoitz;
Baagøe, Hans;
Aihartza, Joxerra

Publication type:

Article

The Foraging Ecology of the Mountain Long-Eared Bat Plecotus macrobullaris Revealed with DNA Mini-Barcodes.

Published in:

PLoS ONE, 2012, v. 7, n. 4, p. 1, doi. 10.1371/journal.pone.0035692

By:

Alberdi, Antton;
Garin, Inazio;
Aizpurua, Ostaizka;
Aihartza, Joxerra

Publication type:

Article

Diversity and compositional changes in the gut microbiota of wild and captive vertebrates: a meta-analysis.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-02015-6

By:

Alberdi, Antton;
Martin Bideguren, Garazi;
Aizpurua, Ostaizka

Publication type:

Article

Broad‐scale patterns of geographic avoidance between species emerge in the absence of fine‐scale mechanisms of coexistence.

Published in:

Diversity & Distributions, 2021, v. 27, n. 9, p. 1606, doi. 10.1111/ddi.13375

By:

Novella‐Fernandez, Roberto;
Juste, Javier;
Ibáñez, Carlos;
Rebelo, Hugo;
Russo, Danilo;
Alberdi, Antton;
Kiefer, Andreas;
Graham, Laura;
Paul, Hynek;
Doncaster, Charles Patrick;
Razgour, Orly;
Capinha, Cesar

Publication type:

Article

First records of the parti-coloured bat Vespertilio murinus (Chiroptera: Vespertilionidae) in the Pyrenees.

Published in:

Mammalia: International Journal of the Systematics, Biology & Ecology of Mammals, 2012, v. 76, n. 1, p. 109, doi. 10.1515/mamm.2011.106

By:

Alberdi, Antton;
Aihartza, Joxerra;
Albero, Juan C.;
Aizpurua, Ostaizka;
López-Baucells, Adrià;
Freixas, Lídia;
Puig, Xavier;
Flaquer, Carles;
Garin, Inazio

Publication type:

Article

A species-level trait dataset of bats in Europe and beyond.

Published in:

Scientific Data, 2023, v. 10, n. 1, p. 1, doi. 10.1038/s41597-023-02157-4

By:

Froidevaux, Jérémy S. P.;
Toshkova, Nia;
Barbaro, Luc;
Benítez-López, Ana;
Kerbiriou, Christian;
Le Viol, Isabelle;
Pacifici, Michela;
Santini, Luca;
Stawski, Clare;
Russo, Danilo;
Dekker, Jasja;
Alberdi, Antton;
Amorim, Francisco;
Ancillotto, Leonardo;
Barré, Kévin;
Bas, Yves;
Cantú-Salazar, Lisette;
Dechmann, Dina K. N.;
Devaux, Tiphaine;
Eldegard, Katrine

Publication type:

Article

Insight on how fishing bats discern prey and adjust their mechanic and sensorial features during the attack sequence.

Published in:

Scientific Reports, 2015, p. 12392, doi. 10.1038/srep12392

By:

Aizpurua, Ostaizka;
Alberdi, Antton;
Aihartza, Joxerra;
Garin, Inazio

Publication type:

Article

Contrasting population-level responses to Pleistocene climatic oscillations in an alpine bat revealed by complete mitochondrial genomes and evolutionary history inference.

Published in:

Journal of Biogeography, 2015, v. 42, n. 9, p. 1689, doi. 10.1111/jbi.12535

By:

Alberdi, Antton;
Gilbert, M. Thomas P.;
Razgour, Orly;
Aizpurua, Ostaizka;
Aihartza, Joxerra;
Garin, Inazio

Publication type:

Article

A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants.

Published in:

BMC Biology, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12915-023-01758-0

By:

Rice, Edward S.;
Alberdi, Antton;
Alfieri, James;
Athrey, Giridhar;
Balacco, Jennifer R.;
Bardou, Philippe;
Blackmon, Heath;
Charles, Mathieu;
Cheng, Hans H.;
Fedrigo, Olivier;
Fiddaman, Steven R.;
Formenti, Giulio;
Frantz, Laurent A. F.;
Gilbert, M. Thomas P.;
Hearn, Cari J.;
Jarvis, Erich D.;
Klopp, Christophe;
Marcos, Sofia;
Mason, Andrew S.;
Velez-Irizarry, Deborah

Publication type:

Article