Works by Aghaeepour, Nima

Results: 71

Cross-species comparative analysis of single presynapses.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-40683-8

By:

Berson, Eloïse;
Gajera, Chandresh R.;
Phongpreecha, Thanaphong;
Perna, Amalia;
Bukhari, Syed A.;
Becker, Martin;
Chang, Alan L.;
De Francesco, Davide;
Espinosa, Camilo;
Ravindra, Neal G.;
Postupna, Nadia;
Latimer, Caitlin S.;
Shively, Carol A.;
Register, Thomas C.;
Craft, Suzanne;
Montine, Kathleen S.;
Fox, Edward J.;
Keene, C. Dirk;
Bendall, Sean C.;
Aghaeepour, Nima

Publication type:

Article

Whole genome deconvolution unveils Alzheimer's resilient epigenetic signature.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40611-4

By:

Berson, Eloise;
Sreenivas, Anjali;
Phongpreecha, Thanaphong;
Perna, Amalia;
Grandi, Fiorella C.;
Xue, Lei;
Ravindra, Neal G.;
Payrovnaziri, Neelufar;
Mataraso, Samson;
Kim, Yeasul;
Espinosa, Camilo;
Chang, Alan L.;
Becker, Martin;
Montine, Kathleen S.;
Fox, Edward J.;
Chang, Howard Y.;
Corces, M. Ryan;
Aghaeepour, Nima;
Montine, Thomas J.

Publication type:

Article

Impact of digital health interventions on glycemic control and weight management.

Published in:

NPJ Digital Medicine, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s41746-025-01430-7

By:

Veluvali, Arvind;
Dehghani Zahedani, Ashkan;
Hosseinian, Amir;
Aghaeepour, Nima;
McLaughlin, Tracey;
Woodward, Mark;
DiTullio, Alex;
Hashemi, Noosheen;
Snyder, Michael P.

Publication type:

Article

Large‐scale proteomics in the first trimester of pregnancy predict psychopathology and temperament in preschool children: an exploratory study.

Published in:

Journal of Child Psychology & Psychiatry, 2024, v. 65, n. 8, p. 1098, doi. 10.1111/jcpp.13948

By:

Buthmann, Jessica L.;
Miller, Jonas G.;
Aghaeepour, Nima;
King, Lucy S.;
Stevenson, David K.;
Shaw, Gary M.;
Wong, Ronald J.;
Gotlib, Ian H.

Publication type:

Article

Automated Analysis of Multidimensional Flow Cytometry Data Improves Diagnostic Accuracy Between Mantle Cell Lymphoma and Small Lymphocytic Lymphoma.

Published in:

American Journal of Clinical Pathology, 2012, v. 137, n. 1, p. 75, doi. 10.1309/AJCPMMLQ67YOMGEW

By:

Zare, Habil;
Bashashati, Ali;
Kridel, Robert;
Aghaeepour, Nima;
Haffari, Gholamreza;
Connors, Joseph M.;
Gascoyne, Randy D.;
Gupta, Arvind;
Brinkman, Ryan R.;
Weng, Andrew P.

Publication type:

Article

Flow Cytometry Bioinformatics.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003365

By:

O'Neill, Kieran;
Aghaeepour, Nima;
Špidlen, Josef;
Brinkman, Ryan

Publication type:

Article

Advances and potential of omics studies for understanding the development of food allergy.

Published in:

Frontiers in Allergy, 2024, p. 1, doi. 10.3389/falgy.2023.1149008

By:

Sindher, Sayantani B.;
Chin, Andrew R.;
Aghaeepour, Nima;
Prince, Lawrence;
Maecker, Holden;
Shaw, Gary M.;
Stevenson, David K.;
Nadeau, Kari C.;
Snyder, Michael;
Khatri, Purvesh;
Boyd, Scott D.;
Winn, Virginia D.;
Angst, Martin S.;
Chinthrajah, R. Sharon

Publication type:

Article

Systematic Immunophenotyping Reveals Sex-Specific Responses After Painful Injury in Mice.

Published in:

Frontiers in Immunology, 2020, v. 11, p. 1, doi. 10.3389/fimmu.2020.01652

By:

Tawfik, Vivianne L.;
Huck, Nolan A.;
Baca, Quentin J.;
Ganio, Edward A.;
Haight, Elena S.;
Culos, Anthony;
Ghaemi, Sajjad;
Phongpreecha, Thanaphong;
Angst, Martin S.;
Clark, J. David;
Aghaeepour, Nima;
Gaudilliere, Brice

Publication type:

Article

Quantitative estimate of cognitive resilience and its medical and genetic associations.

Published in:

Alzheimer's Research & Therapy, 2023, v. 15, n. 1, p. 1, doi. 10.1186/s13195-023-01329-z

By:

Phongpreecha, Thanaphong;
Godrich, Dana;
Berson, Eloise;
Espinosa, Camilo;
Kim, Yeasul;
Cholerton, Brenna;
Chang, Alan L.;
Mataraso, Samson;
Bukhari, Syed A.;
Perna, Amalia;
Yakabi, Koya;
Montine, Kathleen S.;
Poston, Kathleen L.;
Mormino, Elizabeth;
White, Lon;
Beecham, Gary;
Aghaeepour, Nima;
Montine, Thomas J.

Publication type:

Article

Increases in ambient air pollutants during pregnancy are linked to increases in methylation of IL4, IL10, and IFNγ.

Published in:

Clinical Epigenetics, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13148-022-01254-2

By:

Aguilera, Juan;
Han, Xiaorui;
Cao, Shu;
Balmes, John;
Lurmann, Fred;
Tyner, Tim;
Lutzker, Liza;
Noth, Elizabeth;
Hammond, S. Katharine;
Sampath, Vanitha;
Burt, Trevor;
Utz, P. J.;
Khatri, Purvesh;
Aghaeepour, Nima;
Maecker, Holden;
Prunicki, Mary;
Nadeau, Kari

Publication type:

Article

A longitudinal study of the post-stroke immune response and cognitive functioning: the StrokeCog study protocol.

Published in:

2020

By:

Drag, Lauren L.;
Mlynash, Michael;
Nassar, Huda;
Osborn, Elizabeth;
Kim, Da E.;
Angst, Martin S.;
Aghaeepour, Nima;
Buckwalter, Marion;
Lansberg, Maarten G.

Publication type:

journal article

Correction: Digital health application integrating wearable data and behavioral patterns improves metabolic health.

Published in:

2024

By:

Zahedani, Ashkan Dehghani;
McLaughlin, Tracey;
Veluvali, Arvind;
Aghaeepour, Nima;
Hosseinian, Amir;
Agarwal, Saransh;
Ruan, Jingyi;
Tripathi, Shital;
Woodward, Mark;
Hashemi, Noosheen;
Snyder, Michael

Publication type:

Correction Notice

Digital health application integrating wearable data and behavioral patterns improves metabolic health.

Published in:

NPJ Digital Medicine, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s41746-023-00956-y

By:

Zahedani, Ashkan Dehghani;
Veluvali, Arvind;
McLaughlin, Tracey;
Aghaeepour, Nima;
Hosseinian, Amir;
Agarwal, Saransh;
Ruan, Jingyi;
Tripathi, Shital;
Woodward, Mark;
Hashemi, Noosheen;
Snyder, Michael

Publication type:

Article

FEATURE-WEIGHTED ELASTIC NET: USING "FEATURES OF FEATURES" FOR "BETTER PREDICTION".

Published in:

Statistica Sinica, 2023, v. 33, n. 1, p. 259, doi. 10.5705/ss.202020.0226

By:

Tay, J. Kenneth;
Aghaeepour, Nima;
Hastie, Trevor;
Tibshirani, Robert

Publication type:

Article

Critical assessment of automated flow cytometry data analysis techniques.

Published in:

Nature Methods, 2013, v. 10, n. 5, p. 445, doi. 10.1038/nmeth0513-445c

By:

Aghaeepour, Nima;
Finak, Greg;
Hoos, Holger;
Mosmann, Tim R;
Brinkman, Ryan;
Gottardo, Raphael;
Scheuermann, Richard H

Publication type:

Article

Critical assessment of automated flow cytometry data analysis techniques.

Published in:

Nature Methods, 2013, v. 10, n. 5, p. 445, doi. 10.1038/nmeth0513-445e

By:

Aghaeepour, Nima;
Finak, Greg;
Hoos, Holger;
Mosmann, Tim R;
Brinkman, Ryan;
Gottardo, Raphael;
Scheuermann, Richard H

Publication type:

Article

Critical assessment of automated flow cytometry data analysis techniques.

Published in:

Nature Methods, 2013, v. 10, n. 3, p. 228, doi. 10.1038/nmeth.2365

By:

Aghaeepour, Nima;
Finak, Greg;
Dougall, David;
Khodabakhshi, Alireza Hadj;
Mah, Phillip;
Obermoser, Gerlinde;
Spidlen, Josef;
Taylor, Ian;
Wuensch, Sherry A;
Bramson, Jonathan;
Eaves, Connie;
Weng, Andrew P;
III, Edgardo S Fortuno;
Ho, Kevin;
Kollmann, Tobias;
Rogers, Wade;
De Rosa, Stephen;
Dalal, Bakul;
Azad, Ariful;
Pothen, Alex

Publication type:

Article

Leukocyte telomere dynamics across gestation in uncomplicated pregnancies and associations with stress.

Published in:

2022

By:

Panelli, Danielle M.;
Leonard, Stephanie A.;
Wong, Ronald J.;
Becker, Martin;
Mayo, Jonathan A.;
Wu, Erica;
Girsen, Anna I.;
Gotlib, Ian H.;
Aghaeepour, Nima;
Druzin, Maurice L.;
Shaw, Gary M.;
Stevenson, David K.;
Bianco, Katherine

Publication type:

journal article

Enhanced flowType/RchyOptimyx: a Bioconductor pipeline for discovery in high-dimensional cytometry data.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1329, doi. 10.1093/bioinformatics/btt770

By:

O’Neill, Kieran;
Jalali, Adrin;
Aghaeepour, Nima;
Hoos, Holger;
Brinkman, Ryan R.

Publication type:

Article

Early immunologic correlates of HIV protection can be identified from computational analysis of complex multivariate T-cell flow cytometry assays*.

Published in:

Bioinformatics, 2012, v. 28, n. 7, p. 1009, doi. 10.1093/bioinformatics/bts082

By:

Aghaeepour, Nima;
Chattopadhyay, Pratip K.;
Ganesan, Anuradha;
O'Neill, Kieran;
Zare, Habil;
Jalali, Adrin;
Hoos, Holger H.;
Roederer, Mario;
Brinkman, Ryan R.

Publication type:

Article

An immune clock of human pregnancy.

Published in:

Science Immunology, 2017, v. 2, n. 15, p. 1, doi. 10.1126/sciimmunol.aan2946

By:

Aghaeepour, Nima;
Ganio, Edward A.;
Mcilwain, David;
Tsai, Amy S.;
Tingle, Martha;
Van Gassen, Sofie;
Gaudilliere, Dyani K.;
Baca, Quentin;
McNeil, Leslie;
Okada, Robin;
Ghaemi, Mohammad S.;
Furman, David;
Wong, Ronald J.;
Winn, Virginia D.;
Druzin, Maurice L.;
El-Sayed, Yaser Y.;
Quaintance, Cecele;
Gibbs, Ronald;
Darmstadt, Gary L.;
Shaw, Gary M.

Publication type:

Article

Ensemble-based prediction of RNA secondary structures.

Published in:

BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-139

By:

Aghaeepour, Nima;
Hoos, Holger H.

Publication type:

Article

Multiomics modeling of the immunome, transcriptome, microbiome, proteome and metabolome adaptations during human pregnancy.

Published in:

Bioinformatics, 2019, v. 35, n. 1, p. 95, doi. 10.1093/bioinformatics/bty537

By:

Ghaemi, Mohammad Sajjad;
Culos, Anthony;
Stanley, Natalie;
Tanada, Athena;
Tsai, Amy;
Gaudilliere, Dyani;
Ganio, Edward;
Han, Xiaoyuan;
Ando, Kazuo;
McNeil, Leslie;
Tingle, Martha;
Angst, Martin S;
Gaudilliere, Brice;
Aghaeepour, Nima;
Sirota, Marina;
Winn, Virginia D;
Druzin, Maurice L;
Gibbs, Ronald;
Nia, Vahid Partovi;
Agard, Bruno

Publication type:

Article

GateFinder: projection-based gating strategy optimization for flow and mass cytometry.

Published in:

Bioinformatics, 2018, v. 34, n. 23, p. 4131, doi. 10.1093/bioinformatics/bty430

By:

Aghaeepour, Nima;
Simonds, Erin F;
Knapp, David J H F;
Bruggner, Robert V;
Sachs, Karen;
Culos, Anthony;
Gherardini, Pier Federico;
Samusik, Nikolay;
Fragiadakis, Gabriela K;
Bendall, Sean C

Publication type:

Article

Deep profiling of multitube flow cytometry data.

Published in:

Bioinformatics, 2015, v. 31, n. 10, p. 1623, doi. 10.1093/bioinformatics/btv008

By:

O'Neill, Kieran;
Aghaeepour, Nima;
Parker, Jeremy;
Hogge, Donna;
Karsan, Aly;
Dalal, Bakul;
Brinkman, Ryan R.

Publication type:

Article

Multivariate prediction of dementia in Parkinson's disease.

Published in:

NPJ Parkinson's Disease, 2020, v. 6, n. 1, p. N.PAG, doi. 10.1038/s41531-020-00121-2

By:

Phongpreecha, Thanaphong;
Cholerton, Brenna;
Mata, Ignacio F.;
Zabetian, Cyrus P.;
Poston, Kathleen L.;
Aghaeepour, Nima;
Tian, Lu;
Quinn, Joseph F.;
Chung, Kathryn A.;
Hiller, Amie L.;
Hu, Shu-Ching;
Edwards, Karen L.;
Montine, Thomas J.

Publication type:

Article

Harnessing the Potential of Multiomics Studies for Precision Medicine in Infectious Disease.

Published in:

Open Forum Infectious Diseases, 2021, v. 8, n. 11, p. 1, doi. 10.1093/ofid/ofab483

By:

Ward, Rebecca A;
Aghaeepour, Nima;
Bhattacharyya, Roby P;
Clish, Clary B;
Gaudillière, Brice;
Hacohen, Nir;
Mansour, Michael K;
Mudd, Philip A;
Pasupneti, Shravani;
Presti, Rachel M;
Rhee, Eugene P;
Sen, Pritha;
Spec, Andrej;
Tam, Jenny M;
Villani, Alexandra-Chloé;
Woolley, Ann E;
Hsu, Joe L;
Vyas, Jatin M

Publication type:

Article

iRhom2 inhibits bile duct obstruction–induced liver fibrosis.

Published in:

Science Signaling, 2019, v. 12, n. 605, p. 1, doi. 10.1126/scisignal.aax1194

By:

Sundaram, Balamurugan;
Behnke, Kristina;
Belancic, Andrea;
Al-Salihi, Mazin A.;
Thabet, Yasser;
Polz, Robin;
Pellegrino, Rossella;
Zhuang, Yuan;
Shinde, Prashant V.;
Xu, Haifeng C.;
Vasilevska, Jelena;
Longerich, Thomas;
Herebian, Diran;
Mayatepek, Ertan;
Bock, Hans H.;
May, Petra;
Kordes, Claus;
Aghaeepour, Nima;
Mak, Tak W.;
Keitel, Verena

Publication type:

Article

Deletions in the cytoplasmic domain of iRhom1 and iRhom2 promote shedding of the TNF receptor by the protease ADAM17.

Published in:

Science Signaling, 2015, v. 8, n. 401, p. 1, doi. 10.1126/scisignal.aac5356

By:

Maney, Sathish K.;
McIlwain, David R.;
Polz, Robin;
Pandyra, Aleksandra A.;
Sundaram, Balamurugan;
Wolff, Dorit;
Ohishi, Kazuhito;
Maretzky, Thorsten;
Brooke, Matthew A.;
Evers, Astrid;
Vasudevan, Ananda A. Jaguva;
Aghaeepour, Nima;
Scheller, Jürgen;
Münk, Carsten;
Häussinger, Dieter;
Mak, Tak W.;
Nolan, Garry P.;
Kelsell, David P.;
Blobel, Carl P.;
Lang, Karl S.

Publication type:

Article

Computational analysis optimizes the flow cytometric evaluation for lymphoma.

Published in:

Cytometry. Part B, 2014, v. 86B, n. 1, p. 18, doi. 10.1002/cyto.b.21115

By:

Craig, Fiona E.;
Brinkman, Ryan R.;
Eyck, Stephen Ten;
Aghaeepour, Nima

Publication type:

Article

The Phenotypic Distribution and Functional Profile of Tuberculin-Specific CD4 T-Cells Characterizes Different Stages of TB Infection.

Published in:

Cytometry. Part B, 2012, v. 82B, n. 6, p. 360, doi. 10.1002/cyto.b.21041

By:

Streitz, Mathias;
Fuhrmann, Stephan;
Thomas, David;
Cheek, Elizabeth;
Nomura, Laurel;
Maecker, Holden;
Martus, Peter;
Aghaeepour, Nima;
Brinkman, Ryan R.;
Volk, Hans-Dieter;
Kern, Florian

Publication type:

Article

In‐silico generation of high‐dimensional immune response data in patients using a deep neural network.

Published in:

Cytometry. Part A, 2023, v. 103, n. 5, p. 392, doi. 10.1002/cyto.a.24709

By:

Fallahzadeh, Ramin;
Bidoki, Neda H.;
Stelzer, Ina A.;
Becker, Martin;
Marić, Ivana;
Chang, Alan L.;
Culos, Anthony;
Phongpreecha, Thanaphong;
Xenochristou, Maria;
De Francesco, Davide;
Espinosa, Camilo;
Berson, Eloise;
Verdonk, Franck;
Angst, Martin S.;
Gaudilliere, Brice;
Aghaeepour, Nima

Publication type:

Article

CytoNorm: A Normalization Algorithm for Cytometry Data.

Published in:

Cytometry. Part A, 2020, v. 97, n. 3, p. 268, doi. 10.1002/cyto.a.23904

By:

Van Gassen, Sofie;
Gaudilliere, Brice;
Angst, Martin S.;
Saeys, Yvan;
Aghaeepour, Nima

Publication type:

Article

Cyt‐Geist: Current and Future Challenges in Cytometry: Reports of the CYTO 2019 Conference Workshops.

Published in:

Cytometry. Part A, 2019, v. 95, n. 12, p. 1236, doi. 10.1002/cyto.a.23941

By:

Czechowska, Kamila;
Lannigan, Joanne;
Aghaeepour, Nima;
Back, Jessica B.;
Begum, Julfa;
Behbehani, Greg;
Bispo, Cláudia;
Bitoun, Daniel;
Fernández, Alfonso Blanco;
Boova, Samuel Tony;
Brinkman, Ryan Remy;
Ciccolella, Christopher O.;
Cotleur, Bunny;
Davies, Derek;
Dela Cruz, Gelo Victoriano;
Del Rio‐Guerra, Roxana;
Des Lauriers‐Cox, Ann Marie;
Douagi, Iyadh;
Dumrese, Claudia;
Bonilla Escobar, Diana L.

Publication type:

Article

How Clinical Flow Cytometry Rebooted Sepsis Immunology.

Published in:

Cytometry. Part A, 2019, v. 95, n. 4, p. 431, doi. 10.1002/cyto.a.23749

By:

Monneret, Guillaume;
Gossez, Morgane;
Aghaeepour, Nima;
Gaudilliere, Brice;
Venet, Fabienne

Publication type:

Article

A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes.

Published in:

Cytometry. Part A, 2016, v. 89, n. 1, p. 16, doi. 10.1002/cyto.a.22732

By:

Aghaeepour, Nima;
Chattopadhyay, Pratip;
Chikina, Maria;
Dhaene, Tom;
Van Gassen, Sofie;
Kursa, Miron;
Lambrecht, Bart N.;
Malek, Mehrnoush;
McLachlan, G. J.;
Qian, Yu;
Qiu, Peng;
Saeys, Yvan;
Stanton, Rick;
Tong, Dong;
Vens, Celine;
Walkowiak, Sławomir;
Wang, Kui;
Finak, Greg;
Gottardo, Raphael;
Mosmann, Tim

Publication type:

Article

Automated analysis of flow cytometry data comes of age.

Published in:

Cytometry. Part A, 2016, v. 89, n. 1, p. 13, doi. 10.1002/cyto.a.22810

By:

Brinkman, Ryan R.;
Aghaeepour, Nima;
Finak, Greg;
Gottardo, Raphael;
Mosmann, Tim;
Scheuermann, Richard H.

Publication type:

Article

Mid-gestation serum lipidomic profile associations with spontaneous preterm birth are influenced by body mass index.

Published in:

PLoS ONE, 2020, v. 15, n. 11, p. 1, doi. 10.1371/journal.pone.0239115

By:

Borkowski, Kamil;
Newman, John W.;
Aghaeepour, Nima;
Mayo, Jonathan A.;
Blazenović, Ivana;
Fiehn, Oliver;
Stevenson, David K.;
Shaw, Gary M.;
Carmichael, Suzan L.

Publication type:

Article

Author Correction: Preferential inhibition of adaptive immune system dynamics by glucocorticoids in patients after acute surgical trauma.

Published in:

2020

By:

Ganio, Edward A.;
Stanley, Natalie;
Lindberg-Larsen, Viktoria;
Einhaus, Jakob;
Tsai, Amy S.;
Verdonk, Franck;
Culos, Anthony;
Ghaemi, Sajjad;
Rumer, Kristen K.;
Stelzer, Ina A.;
Gaudilliere, Dyani;
Tsai, Eileen;
Fallahzadeh, Ramin;
Choisy, Benjamin;
Kehlet, Henrik;
Aghaeepour, Nima;
Angst, Martin S.;
Gaudilliere, Brice

Publication type:

Correction Notice

Preferential inhibition of adaptive immune system dynamics by glucocorticoids in patients after acute surgical trauma.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-17565-y

By:

Ganio, Edward A.;
Stanley, Natalie;
Lindberg-Larsen, Viktoria;
Einhaus, Jakob;
Tsai, Amy S.;
Verdonk, Franck;
Culos, Anthony;
Gahemi, Sajjad;
Rumer, Kristen K.;
Stelzer, Ina A.;
Gaudilliere, Dyani;
Tsai, Eileen;
Fallahzadeh, Ramin;
Choisy, Benjamin;
Kehlet, Henrik;
Aghaeepour, Nima;
Angst, Martin S.;
Gaudilliere, Brice

Publication type:

Article

Integration of Lyoplate Based Flow Cytometry and Computational Analysis for Standardized Immunological Biomarker Discovery.

Published in:

PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0065485

By:

Villanova, Federica;
Di Meglio, Paola;
Inokuma, Margaret;
Aghaeepour, Nima;
Perucha, Esperanza;
Mollon, Jennifer;
Nomura, Laurel;
Hernandez-Fuentes, Maria;
Cope, Andrew;
Prevost, A. Toby;
Heck, Susanne;
Maino, Vernon;
Lord, Graham;
Brinkman, Ryan R.;
Nestle, Frank O.

Publication type:

Article

Mediterranean vs. Western diet effects on the primate cerebral cortical pre‐synaptic proteome: Relationships with the transcriptome and multi‐system phenotypes.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2025, v. 21, n. 3, p. 1, doi. 10.1002/alz.70041

By:

Berson, Eloise;
Frye, Brett M.;
Gajera, Chandresh R.;
Saarunya, Geetha;
Perna, Amalia;
Phongpreecha, Thanaphong;
Shome, Sayane;
Negrey, Jacob D.;
Aghaeepour, Nima;
Montine, Thomas J.;
Craft, Suzanne;
Register, Thomas C.;
Shively, Carol A.

Publication type:

Article

Effects of Mediterranean vs. Western Diets on the Cerebral Cortical Pre‐Synaptic Proteome in Nonhuman Primates.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, p. 1, doi. 10.1002/alz.089274

By:

Berson, Eloise;
Frye, Brett M.;
Perna, Amalia;
Phongpreecha, Thanaphong;
Shome, Sayane;
Clarke, Geetha;
Negrey, Jacob D.;
Aghaeepour, Nima;
Montine, Thomas J.;
Craft, Suzanne;
Register, Thomas C.;
Shively, Carol A.

Publication type:

Article

Deep learning resolves cell‐type specific transcriptomes and unveils synaptic changes associated with neurodegeneration.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, p. 1, doi. 10.1002/alz.087057

By:

Berson, Eloise;
Perna, Amalia;
Phongpreecha, Thanaphong;
Aghaeepour, Nima;
Montine, Thomas J.

Publication type:

Article

Prediction of multiple neuropathologic changes from features available during life.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.067030

By:

Phongpreecha, Thanaphong;
De Francesco, Davide;
Chang, Alan;
Thuraiappah, Melan;
Becker, Martin;
Ravindra, Neal;
Berson, Eloise;
Espinosa, Camilo;
Mataraso, Samson;
Godrich, Dana;
Beecham, Gary W.;
Aghaeepour, Nima;
Montine, Thomas J.

Publication type:

Article

Proteomics reveals associations between inflammation and chronic depression in a prospective study of post‐stroke cognition.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2022, v. 18, n. 6, p. 1, doi. 10.1002/alz.064301

By:

Zera, Kristy A;
Bidoki, Neda;
Nassar, Huda;
Drag, Lauren;
Mlynash, Michael;
Osborn, Elizabeth;
Musabbir, Muhith;
Kim, Da Eun;
Mendez, Maria;
Lansberg, Maarten;
Aghaeepour, Nima;
Buckwalter, Marion S

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Article

Proteins in Scalp Hair of Preschool Children.

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Psych, 2024, v. 6, n. 1, p. 143, doi. 10.3390/psych6010009

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Rovnaghi, Cynthia R.;
Singhal, Kratika;
Leib, Ryan D.;
Xenochristou, Maria;
Aghaeepour, Nima;
Chien, Allis S.;
Dinakarpandian, Deendayal;
Anand, Kanwaljeet J. S.

Publication type:

Article

Mitigation of outcome conflation in predicting patient outcomes using electronic health records.

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Journal of the American Medical Informatics Association, 2025, v. 32, n. 5, p. 920, doi. 10.1093/jamia/ocaf033

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Reincke, S Momsen;
Espinosa, Camilo;
Chung, Philip;
James, Tomin;
Berson, Eloïse;
Aghaeepour, Nima

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Article

Large Language Model Capabilities in Perioperative Risk Prediction and Prognostication.

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JAMA Surgery, 2024, v. 159, n. 8, p. 928, doi. 10.1001/jamasurg.2024.1621

By:

Chung, Philip;
Fong, Christine T.;
Walters, Andrew M.;
Aghaeepour, Nima;
Yetisgen, Meliha;
O'Reilly-Shah, Vikas N.

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Article

Early response evaluation by single cell signaling profiling in acute myeloid leukemia.

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Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-022-35624-4

By:

Tislevoll, Benedicte Sjo;
Hellesøy, Monica;
Fagerholt, Oda Helen Eck;
Gullaksen, Stein-Erik;
Srivastava, Aashish;
Birkeland, Even;
Kleftogiannis, Dimitrios;
Ayuda-Durán, Pilar;
Piechaczyk, Laure;
Tadele, Dagim Shiferaw;
Skavland, Jørn;
Panagiotis, Baliakas;
Hovland, Randi;
Andresen, Vibeke;
Seternes, Ole Morten;
Tvedt, Tor Henrik Anderson;
Aghaeepour, Nima;
Gavasso, Sonia;
Porkka, Kimmo;
Jonassen, Inge

Publication type:

Article