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The Lothian Diary Project: Investigating the Impact of the COVID-19 Pandemic on Edinburgh and Lothian Residents.
Published in:
Journal of Open Humanities Data, 2021, v. 7, n. 1, p. 1, doi. 10.5334/johd.25
By:
- HALL-LEW, LAUREN;
- COWIE, CLAIRE;
- MCNULTY, STEPHEN JOSEPH;
- MARKL, NINA;
- LIU, SHAN-JAN SARAH;
- LAI, CATHERINE;
- LLEWELLYN, CLARE;
- ALEX, BEATRICE;
- FANG, NINI;
- ELLIOTT, ZUZANA;
- KLINGLER, ANITA
Publication type:
Article
Ontology-driven and weakly supervised rare disease identification from clinical notes.
Published in:
BMC Medical Informatics & Decision Making, 2023, v. 23, n. 1, p. 1, doi. 10.1186/s12911-023-02181-9
By:
- Dong, Hang;
- Suárez-Paniagua, Víctor;
- Zhang, Huayu;
- Wang, Minhong;
- Casey, Arlene;
- Davidson, Emma;
- Chen, Jiaoyan;
- Alex, Beatrice;
- Whiteley, William;
- Wu, Honghan
Publication type:
Article
Text mining brain imaging reports.
Published in:
Journal of Biomedical Semantics, 2019, v. 10, p. N.PAG, doi. 10.1186/s13326-019-0211-7
By:
- Alex, Beatrice;
- Grover, Claire;
- Tobin, Richard;
- Sudlow, Cathie;
- Mair, Grant;
- Whiteley, William
Publication type:
Article
Importance of patient bed pathways and length of stay differences in predicting COVID-19 hospital bed occupancy in England.
Published in:
2021
By:
- Leclerc, Quentin J.;
- Fuller, Naomi M.;
- Keogh, Ruth H.;
- Diaz-Ordaz, Karla;
- Sekula, Richard;
- Semple, Malcolm G.;
- ISARIC4C Investigators;
- Baillie, J. Kenneth;
- Openshaw, Peter J. M.;
- Carson, Gail;
- Alex, Beatrice;
- Bach, Benjamin;
- Barclay, Wendy S.;
- Bogaert, Debby;
- Chand, Meera;
- Cooke, Graham S.;
- Docherty, Annemarie B.;
- Dunning, Jake;
- da Silva Filipe, Ana;
- Fletcher, Tom
Publication type:
journal article
Exploring the boundaries: gene and protein identification in biomedical text.
Published in:
BMC Bioinformatics, 2005, v. 6, p. S5, doi. 10.1186/1471-2105-6-S1-S5
By:
- Finkel, Jenny;
- Dingare, Shipra;
- Manning, Christopher D.;
- Nissim, Malvina;
- Alex, Beatrice;
- Grover, Claire
Publication type:
Article
Can GPT-3.5 generate and code discharge summaries?
Published in:
Journal of the American Medical Informatics Association, 2024, v. 31, n. 10, p. 2284, doi. 10.1093/jamia/ocae132
By:
- Falis, Matúš;
- Gema, Aryo Pradipta;
- Dong, Hang;
- Daines, Luke;
- Basetti, Siddharth;
- Holder, Michael;
- Penfold, Rose S;
- Birch, Alexandra;
- Alex, Beatrice
Publication type:
Article
Validation of extracorporeal membrane oxygenation mortality prediction and severity of illness scores in an international COVID‐19 cohort.
Published in:
Artificial Organs, 2023, v. 47, n. 9, p. 1490, doi. 10.1111/aor.14542
By:
- Shah, Neel;
- Xue, Bing;
- Xu, Ziqi;
- Yang, Hanqing;
- Marwali, Eva;
- Dalton, Heidi;
- Payne, Philip P. R.;
- Lu, Chenyang;
- Said, Ahmed S.;
- Abdukahil, Sheryl Ann;
- Abdulkadir, Nurul Najmee;
- Absil, Lara;
- Acker, Andrew;
- Adrião, Diana;
- Hssain, Ali Ait;
- Akwani, Chika;
- Al Qasim, Eman;
- Alalqam, Razi;
- Al‐dabbous, Tala;
- Alex, Beatrice
Publication type:
Article
Classifying patient and professional voice in social media health posts.
Published in:
2021
By:
- Alex, Beatrice;
- Whyte, Donald;
- Duma, Daniel;
- Owen, Roma English;
- Fairley, Elizabeth A. L.
Publication type:
journal article
A systematic review of natural language processing applied to radiology reports.
Published in:
2021
By:
- Casey, Arlene;
- Davidson, Emma;
- Poon, Michael;
- Dong, Hang;
- Duma, Daniel;
- Grivas, Andreas;
- Grover, Claire;
- Suárez-Paniagua, Víctor;
- Tobin, Richard;
- Whiteley, William;
- Wu, Honghan;
- Alex, Beatrice
Publication type:
journal article
Long-term neurological symptoms after acute COVID-19 illness requiring hospitalization in adult patients: insights from the ISARIC-COVID-19 follow-up study.
Published in:
Journal of Neurology, 2024, v. 271, n. 1, p. 79, doi. 10.1007/s00415-023-12133-y
By:
- Battaglini, Denise;
- White, Nicole M.;
- Premraj, Lavienraj;
- Wanjiru Citarella, Barbara;
- Merson, Laura;
- Robba, Chiara;
- Thomson, David;
- Cho, Sung-Min;
- ISARIC Clinical Characterization Group;
- Abel, Laurent;
- Abrous, Amal;
- Jabal, Kamal Abu;
- Ademnou, Manuella;
- Tamlihat, Younes Ait;
- Alameen, Aliya Mohammed;
- Alessi, Marta;
- Alex, Beatrice;
- Alexandre, Kévin;
- Ali, Adam;
- Alidjnou, Kazali Enagnon
Publication type:
Article
The reporting quality of natural language processing studies: systematic review of studies of radiology reports.
Published in:
BMC Medical Imaging, 2021, v. 21, n. 1, p. 1, doi. 10.1186/s12880-021-00671-8
By:
- Davidson, Emma M.;
- Poon, Michael T. C.;
- Casey, Arlene;
- Grivas, Andreas;
- Duma, Daniel;
- Dong, Hang;
- Suárez-Paniagua, Víctor;
- Grover, Claire;
- Tobin, Richard;
- Whalley, Heather;
- Wu, Honghan;
- Alex, Beatrice;
- Whiteley, William
Publication type:
Article
Geoparsing historical and contemporary literary text set in the City of Edinburgh.
Published in:
Language Resources & Evaluation, 2019, v. 53, n. 4, p. 651, doi. 10.1007/s10579-019-09443-x
By:
- Alex, Beatrice;
- Grover, Claire;
- Tobin, Richard;
- Oberlander, Jon
Publication type:
Article
FLAP: a framework for linking free-text addresses to the Ordnance Survey Unique Property Reference Number database.
Published in:
Frontiers in Digital Health, 2023, p. 1, doi. 10.3389/fdgth.2023.1186208
By:
- Huayu Zhang;
- Casey, Arlene;
- Guellil, Imane;
- Suárez-Paniagua, Víctor;
- MacRae, Clare;
- Marwick, Charis;
- Honghan Wu;
- Guthrie, Bruce;
- Alex, Beatrice
Publication type:
Article
A survey on clinical natural language processing in the United Kingdom from 2007 to 2022.
Published in:
NPJ Digital Medicine, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s41746-022-00730-6
By:
- Wu, Honghan;
- Wang, Minhong;
- Wu, Jinge;
- Francis, Farah;
- Chang, Yun-Hsuan;
- Shavick, Alex;
- Dong, Hang;
- Poon, Michael T. C.;
- Fitzpatrick, Natalie;
- Levine, Adam P.;
- Slater, Luke T.;
- Handy, Alex;
- Karwath, Andreas;
- Gkoutos, Georgios V.;
- Chelala, Claude;
- Shah, Anoop Dinesh;
- Stewart, Robert;
- Collier, Nigel;
- Alex, Beatrice;
- Whiteley, William
Publication type:
Article
Automated clinical coding: what, why, and where we are?
Published in:
NPJ Digital Medicine, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s41746-022-00705-7
By:
- Dong, Hang;
- Falis, Matúš;
- Whiteley, William;
- Alex, Beatrice;
- Matterson, Joshua;
- Ji, Shaoxiong;
- Chen, Jiaoyan;
- Wu, Honghan
Publication type:
Article
Adapting the Edinburgh Geoparser for Historical Georeferencing.
Published in:
International Journal of Humanities & Arts Computing: A Journal of Digital Humanities, 2015, v. 9, n. 1, p. 15, doi. 10.3366/ijhac.2015.0136
By:
- Alex, Beatrice;
- Byrne, Kate;
- Grover, Claire;
- Tobin, Richard
Publication type:
Article
A validated natural language processing algorithm for brain imaging phenotypes from radiology reports in UK electronic health records.
Published in:
2019
By:
- Wheater, Emily;
- Mair, Grant;
- Sudlow, Cathie;
- Alex, Beatrice;
- Grover, Claire;
- Whiteley, William
Publication type:
journal article
The Lothian Diary Project: sociolinguistic methods during the COVID-19 lockdown.
Published in:
Linguistics Vanguard, 2022, v. 8, p. 321, doi. 10.1515/lingvan-2021-0053
By:
- Hall-Lew, Lauren;
- Cowie, Claire;
- Lai, Catherine;
- Markl, Nina;
- McNulty, Stephen Joseph;
- Liu, Shan-Jan Sarah;
- Llewellyn, Clare;
- Alex, Beatrice;
- Elliott, Zuzana;
- Klingler, Anita
Publication type:
Article
Palimpsest: Improving assisted curation of loco-specifice.
Published in:
Digital Scholarship in the Humanities, 2017, v. 32, p. i4
By:
- Alex, Beatrice;
- Grover, Claire;
- Oberlander, Jon;
- Thomson, Tara;
- Anderson, Miranda;
- Loxley, James;
- Hinrichs, Uta;
- Zhou, Ke
Publication type:
Article
Trading Consequences: A Case Study of Combining Text Mining and Visualization to Facilitate Document Exploration.
Published in:
Digital Scholarship in the Humanities, 2015, v. 30, p. i50, doi. 10.1093/llc/fqv046
By:
- Hinrichs, Uta;
- Alex, Beatrice;
- Clifford, Jim;
- Watson, Andrew;
- Quigley, Aaron;
- Klein, Ewan;
- Coates, Colin M.
Publication type:
Article

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