Works by Žel, Jana

Results: 35

NAIMA: target amplification strategy allowing quantitative on-chip detection of GMOs.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 18, p. e118, doi. 10.1093/nar/gkn524

By:

Morisset, Dany;
Dobnik, David;
Hamels, Sandrine;
Žel, Jana;
Gruden, Kristina

Publication type:

Article

Fast and Accurate Multiplex Identification and Quantification of Seven Genetically Modified Soybean Lines Using Six-Color Digital PCR.

Published in:

Foods, 2023, v. 12, n. 22, p. 4156, doi. 10.3390/foods12224156

By:

Bogožalec Košir, Alexandra;
Muller, Sabine;
Žel, Jana;
Milavec, Mojca;
Mallory, Allison C.;
Dobnik, David

Publication type:

Article

PVYNTN elicits a diverse gene expression response in different potato genotypes in the first 12 h after inoculation.

Published in:

Molecular Plant Pathology, 2009, v. 10, n. 2, p. 263, doi. 10.1111/j.1364-3703.2008.00530.x

By:

BAEBLER, ŠPELA;
KREČIČ-STRES, HANA;
ROTTER, ANA;
KOGOVŠEK, POLONA;
CANKAR, KATARINA;
KOK, ESTHER J.;
GRUDEN, KRISTINA;
KOVA, MAJA;
ŽEL, JANA;
POMPE-NOVAK, MARUŠA;
RAVNIKAR, MAJA

Publication type:

Article

Inter-laboratory analysis of selected genetically modified plant reference materials with digital PCR.

Published in:

Analytical & Bioanalytical Chemistry, 2018, v. 410, n. 1, p. 211, doi. 10.1007/s00216-017-0711-1

By:

Dobnik, David;
Demšar, Tina;
Huber, Ingrid;
Gerdes, Lars;
Broeders, Sylvia;
Roosens, Nancy;
Debode, Frederic;
Berben, Gilbert;
Žel, Jana

Publication type:

Article

Droplet volume variability as a critical factor for accuracy of absolute quantification using droplet digital PCR.

Published in:

Analytical & Bioanalytical Chemistry, 2017, v. 409, n. 28, p. 6689, doi. 10.1007/s00216-017-0625-y

By:

Košir, Alexandra;
Divieto, Carla;
Pavšič, Jernej;
Pavarelli, Stefano;
Dobnik, David;
Dreo, Tanja;
Bellotti, Roberto;
Sassi, Maria;
Žel, Jana

Publication type:

Article

Inter-laboratory assessment of different digital PCR platforms for quantification of human cytomegalovirus DNA.

Published in:

Analytical & Bioanalytical Chemistry, 2017, v. 409, n. 10, p. 2601, doi. 10.1007/s00216-017-0206-0

By:

Pavšič, Jernej;
Devonshire, Alison;
Blejec, Andrej;
Foy, Carole;
Heuverswyn, Fran;
Jones, Gerwyn;
Schimmel, Heinz;
Žel, Jana;
Huggett, Jim;
Redshaw, Nicholas;
Karczmarczyk, Maria;
Mozioğlu, Erkan;
Akyürek, Sema;
Akgöz, Müslüm;
Milavec, Mojca

Publication type:

Article

Assessment of the real-time PCR and different digital PCR platforms for DNA quantification.

Published in:

Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 1, p. 107, doi. 10.1007/s00216-015-9107-2

By:

Pavšič, Jernej;
Žel, Jana;
Milavec, Mojca

Publication type:

Article

Digital PCR for direct quantification of viruses without DNA extraction.

Published in:

Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 1, p. 67, doi. 10.1007/s00216-015-9109-0

By:

Pavšič, Jernej;
Žel, Jana;
Milavec, Mojca

Publication type:

Article

GMO quantification: valuable experience and insights for the future.

Published in:

Analytical & Bioanalytical Chemistry, 2014, v. 406, n. 26, p. 6485, doi. 10.1007/s00216-014-8077-0

By:

Milavec, Mojca;
Dobnik, David;
Yang, Litao;
Zhang, Dabing;
Gruden, Kristina;
Žel, Jana

Publication type:

Article

Optimising droplet digital PCR analysis approaches for detection and quantification of bacteria: a case study of fire blight and potato brown rot.

Published in:

Analytical & Bioanalytical Chemistry, 2014, v. 406, n. 26, p. 6513, doi. 10.1007/s00216-014-8084-1

By:

Dreo, Tanja;
Pirc, Manca;
Ramšak, Živa;
Pavšič, Jernej;
Milavec, Mojca;
Žel, Jana;
Gruden, Kristina

Publication type:

Article

Jasmonic acid promotes division of fern protoplasts, elongation of rhizoids and early development of gametophytes.

Published in:

Physiologia Plantarum, 1996, v. 97, n. 4, p. 659, doi. 10.1111/j.1399-3054.1996.tb00529.x

By:

Camloh, Marjana;
Ravnikar, Maja;
Žel, Jana

Publication type:

Article

Effects of aluminum on membrane fluidity of the mycorrhizal fungus Amanita muscaria.

Published in:

Physiologia Plantarum, 1993, v. 89, n. 1, p. 172, doi. 10.1111/j.1399-3054.1993.tb01801.x

By:

Žel, Jana;
Svetek, Jelka;
Črne, Helena;
Schara, Milan

Publication type:

Article

Solanum venturii, a suitable model system for virus-induced gene silencing studies in potato reveals StMKK6 as an important player in plant immunity.

Published in:

Plant Methods, 2016, v. 12, p. 1, doi. 10.1186/s13007-016-0129-3

By:

Dobnik, David;
Lazar, Ana;
Stare, Tjaša;
Gruden, Kristina;
Vleeshouwers, Vivianne G. A. A.;
Žel, Jana

Publication type:

Article

Comparison of different real-time PCR chemistries and their suitability for detection and quantification of genetically modified organisms.

Published in:

BMC Biotechnology, 2008, v. 8, p. 1, doi. 10.1186/1472-6750-8-26

By:

Gašparič, Meti Buh;
Cankar, Katarina;
Žel, Jana;
Gruden, Kristina

Publication type:

Article

Critical points of DNA quantification by real-time PCR -- effects of DNA extraction method and sample matrix on quantification of genetically modified organisms.

Published in:

BMC Biotechnology, 2006, v. 6, p. 37, doi. 10.1186/1472-6750-6-37

By:

Cankar, Katarina;
Štebih, Dejan;
Dreo, Tanja;
Žel, Jana;
Gruden, Kristina

Publication type:

Article

β-1,3-glucanase class III promotes spread of PVY and improves in planta protein production.

Published in:

Plant Biotechnology Reports, 2013, v. 7, n. 4, p. 547, doi. 10.1007/s11816-013-0300-5

By:

Dobnik, David;
Baebler, Špela;
Kogovšek, Polona;
Pompe-Novak, Maruša;
Štebih, Dejan;
Panter, Gabriela;
Janež, Nikolaja;
Morisset, Dany;
Žel, Jana;
Gruden, Kristina

Publication type:

Article

GMOseek: a user friendly tool for optimized GMO testing.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-258

By:

Morisset, Dany;
Novak, Petra Kralj;
Zupanič, Darko;
Gruden, Kristina;
Lavrač, Nada;
Žel, Jana

Publication type:

Article

The GMOseek matrix: a decision support tool for optimizing the detection of genetically modified plants.

Published in:

BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-256

By:

Block, Annette;
Debode, Frédéric;
Grohmann, Lutz;
Hulin, Julie;
Taverniers, Isabel;
Kluga, Linda;
Barbau-Piednoir, Elodie;
Broeders, Sylvia;
Huber, Ingrid;
Den Bulcke, Marc Van;
Heinze, Petra;
Berben, Gilbert;
Busch, Ulrich;
Roosens, Nancy;
Janssen, Eric;
Žel, Jana;
Gruden, Kristina;
Morisset, Dany

Publication type:

Article

Author Correction: Development and inter-laboratory assessment of droplet digital PCR assays for multiplex quantification of 15 genetically modified soybean lines.

Published in:

2019

By:

Košir, Alexandra Bogožalec;
Spilsberg, Bjørn;
Holst-Jensen, Arne;
Žel, Jana;
Dobnik, David

Publication type:

Correction Notice

Author Correction: ALF: a strategy for identification of unauthorized GMOs in complex mixtures by a GW-NGS method and dedicated bioinformatics analysis.

Published in:

2018

By:

Košir, Alexandra Bogožalec;
Arulandhu, Alfred J.;
Voorhuijzen, Marleen M.;
Xiao, Hongmei;
Hagelaar, Rico;
Staats, Martijn;
Costessi, Adalberto;
Žel, Jana;
Kok, Esther J.;
van Dijk, Jeroen P.

Publication type:

Correction Notice

Method Validation and Quality Management in the Flexible Scope of Accreditation: An Example of Laboratories Testing for Genetically Modified Organisms.

Published in:

Food Analytical Methods, 2008, v. 1, n. 2, p. 61, doi. 10.1007/s12161-008-9016-5

By:

Žel, Jana;
Mazzara, Marco;
Savini, Cristian;
Cordeil, Stephane;
Camloh, Marjana;
Štebih, Dejan;
Cankar, Katarina;
Gruden, Kristina;
Morisset, Dany;
Eede, Guy

Publication type:

Article

New approaches in GMO detection.

Published in:

Analytical & Bioanalytical Chemistry, 2010, v. 396, n. 6, p. 1991, doi. 10.1007/s00216-009-3237-3

By:

Querci, Maddalena;
Van den Bulcke, Marc;
Žel, Jana;
Van den Eede, Guy;
Broll, Hermann

Publication type:

Article

Comparison of nine different real-time PCR chemistries for qualitative and quantitative applications in GMO detection.

Published in:

Analytical & Bioanalytical Chemistry, 2010, v. 396, n. 6, p. 2023, doi. 10.1007/s00216-009-3418-0

By:

Gašpariè, Meti Buh;
Tengs, Torstein;
La Paz, Jose Luis;
Holst-Jensen, Arne;
Pla, Maria;
Esteve, Teresa;
Žel, Jana;
Gruden, Kristina

Publication type:

Article

Knowledge-technology-based discovery of unauthorized genetically modified organisms.

Published in:

Analytical & Bioanalytical Chemistry, 2010, v. 396, n. 6, p. 1951, doi. 10.1007/s00216-009-3218-6

By:

Ruttink, Tom;
Morisset, Dany;
Droogenbroeck, Bart Van;
Lavrač, Nada;
Eede, Guy L. M. Van Den;
Žel, Jana;
De Loose, Marc

Publication type:

Article

ALF: a strategy for identification of unauthorized GMOs in complex mixtures by a GW-NGS method and dedicated bioinformatics analysis.

Published in:

Scientific Reports, 2017, v. 7, n. 1, p. 1, doi. 10.1038/s41598-017-14469-8

By:

Košir, Alexandra Bogožalec;
Arulandhu, Alfred J.;
Voorhuijzen, Marleen M.;
Xiao, Hongmei;
Hagelaar, Rico;
Staats, Martijn;
Costessi, Adalberto;
Žel, Jana;
Kok, Esther J.;
Dijk, Jeroen P. van

Publication type:

Article

Development and inter-laboratory assessment of droplet digital PCR assays for multiplex quantification of 15 genetically modified soybean lines.

Published in:

Scientific Reports, 2017, v. 7, n. 1, p. 1, doi. 10.1038/s41598-017-09377-w

By:

Košir, Alexandra Bogožalec;
Spilsberg, Bjørn;
Holst-Jensen, Arne;
Žel, Jana;
Dobnik, David

Publication type:

Article

Multiplex quantification of four DNA targets in one reaction with Bio-Rad droplet digital PCR system for GMO detection.

Published in:

Scientific Reports, 2016, p. 35451, doi. 10.1038/srep35451

By:

Dobnik, David;
Štebih, Dejan;
Blejec, Andrej;
Morisset, Dany;
Žel, Jana

Publication type:

Article

Involvement of Potato (Solanum tuberosum L.) MKK6 in Response to Potato virus Y.

Published in:

PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0104553

By:

Lazar, Ana;
Coll, Anna;
Dobnik, David;
Baebler, Špela;
Bedina-Zavec, Apolonija;
Žel, Jana;
Gruden, Kristina

Publication type:

Article

Insertion of a Specific Fungal 3′-phosphoadenosine-5′-phosphatase Motif into a Plant Homologue Improves Halotolerance and Drought Tolerance of Plants.

Published in:

PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0081872

By:

Gašparič, Meti Buh;
Lenassi, Metka;
Gostinčar, Cene;
Rotter, Ana;
Plemenitaš, Ana;
Gunde-Cimerman, Nina;
Gruden, Kristina;
Žel, Jana

Publication type:

Article

Quantitative Analysis of Food and Feed Samples with Droplet Digital PCR

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0062583

By:

Morisset, Dany;
Štebih, Dejan;
Milavec, Mojca;
Gruden, Kristina;
Žel, Jana

Publication type:

Article

Calculation of Measurement Uncertainty in Quantitative Analysis of Genetically Modified Organisms Using Intermediate Precision-A Practical Approach.

Published in:

Journal of AOAC International, 2007, v. 90, n. 2, p. 582

By:

Žel, Jana;
Gruden, Kristina;
Cankar, Katarina;
Štebih, Dejan;
Blejec, Andrej

Publication type:

Article

Strong resistance to potato tuber necrotic ringspot disease in potato induced by transformation with coat protein gene sequences from an NTN isolate of Potato virus Y.

Published in:

Annals of Applied Biology, 2001, v. 139, n. 2, p. 269, doi. 10.1111/j.1744-7348.2001.tb00403.x

By:

RACMAN, DARJA STANIČ;
MCGEACHY, KARA;
REAVY, BRIAN;
ŠTRUKELJ, BORUT;
ŽEL, JANA;
BARKER, HUGH

Publication type:

Article

Inactivation of Pepper Mild Mottle Virus in Water by Cold Atmospheric Plasma.

Published in:

Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.618209

By:

Filipić, Arijana;
Dobnik, David;
Tušek Žnidarič, Magda;
Žegura, Bojana;
Štern, Alja;
Primc, Gregor;
Mozetič, Miran;
Ravnikar, Maja;
Žel, Jana;
Gutierrez Aguirre, Ion

Publication type:

Article

Detection of genetically modified organisms—closing the gaps.

Published in:

2009

By:

Morisset, Dany;
Demšar, Tina;
Gruden, Kristina;
Vojvoda, Jana;
Štebih, Dejan;
Žel, Jana

Publication type:

Letter

Decision Support for the Comparative Evaluation and Selection of Analytical Methods: Detection of Genetically Modified Organisms as an Example.

Published in:

Food Analytical Methods, 2018, v. 11, n. 8, p. 2105, doi. 10.1007/s12161-018-1194-1

By:

Dobnik, David;
Gruden, Kristina;
Žel, Jana;
Bertheau, Yves;
Holst-Jensen, Arne;
Bohanec, Marko

Publication type:

Article

Works by Žel, Jana

NAIMA: target amplification strategy allowing quantitative on-chip detection of GMOs.

Fast and Accurate Multiplex Identification and Quantification of Seven Genetically Modified Soybean Lines Using Six-Color Digital PCR.

PVY<sup>NTN</sup> elicits a diverse gene expression response in different potato genotypes in the first 12 h after inoculation.

Inter-laboratory analysis of selected genetically modified plant reference materials with digital PCR.

Droplet volume variability as a critical factor for accuracy of absolute quantification using droplet digital PCR.

Inter-laboratory assessment of different digital PCR platforms for quantification of human cytomegalovirus DNA.

Assessment of the real-time PCR and different digital PCR platforms for DNA quantification.

Digital PCR for direct quantification of viruses without DNA extraction.

GMO quantification: valuable experience and insights for the future.

Optimising droplet digital PCR analysis approaches for detection and quantification of bacteria: a case study of fire blight and potato brown rot.

Jasmonic acid promotes division of fern protoplasts, elongation of rhizoids and early development of gametophytes.

Effects of aluminum on membrane fluidity of the mycorrhizal fungus Amanita muscaria.

Solanum venturii, a suitable model system for virus-induced gene silencing studies in potato reveals StMKK6 as an important player in plant immunity.

Comparison of different real-time PCR chemistries and their suitability for detection and quantification of genetically modified organisms.

Critical points of DNA quantification by real-time PCR -- effects of DNA extraction method and sample matrix on quantification of genetically modified organisms.

β-1,3-glucanase class III promotes spread of PVY and improves in planta protein production.

GMOseek: a user friendly tool for optimized GMO testing.

The GMOseek matrix: a decision support tool for optimizing the detection of genetically modified plants.

Author Correction: Development and inter-laboratory assessment of droplet digital PCR assays for multiplex quantification of 15 genetically modified soybean lines.

Author Correction: ALF: a strategy for identification of unauthorized GMOs in complex mixtures by a GW-NGS method and dedicated bioinformatics analysis.

Method Validation and Quality Management in the Flexible Scope of Accreditation: An Example of Laboratories Testing for Genetically Modified Organisms.

New approaches in GMO detection.

Comparison of nine different real-time PCR chemistries for qualitative and quantitative applications in GMO detection.

Knowledge-technology-based discovery of unauthorized genetically modified organisms.

ALF: a strategy for identification of unauthorized GMOs in complex mixtures by a GW-NGS method and dedicated bioinformatics analysis.

Development and inter-laboratory assessment of droplet digital PCR assays for multiplex quantification of 15 genetically modified soybean lines.

Multiplex quantification of four DNA targets in one reaction with Bio-Rad droplet digital PCR system for GMO detection.

Involvement of Potato (<i>Solanum tuberosum</i> L.) MKK6 in Response to <i>Potato virus Y</i>.

Insertion of a Specific Fungal 3′-phosphoadenosine-5′-phosphatase Motif into a Plant Homologue Improves Halotolerance and Drought Tolerance of Plants.

Quantitative Analysis of Food and Feed Samples with Droplet Digital PCR

Calculation of Measurement Uncertainty in Quantitative Analysis of Genetically Modified Organisms Using Intermediate Precision-A Practical Approach.

Strong resistance to potato tuber necrotic ringspot disease in potato induced by transformation with coat protein gene sequences from an NTN isolate of Potato virus Y.

Inactivation of Pepper Mild Mottle Virus in Water by Cold Atmospheric Plasma.

Detection of genetically modified organisms—closing the gaps.

Decision Support for the Comparative Evaluation and Selection of Analytical Methods: Detection of Genetically Modified Organisms as an Example.