Works by Šafář, Jan

Results: 40

Chromosomes in the flow to simplify genome analysis.
Published in:
Functional & Integrative Genomics, 2012, v. 12, n. 3, p. 397, doi. 10.1007/s10142-012-0293-0
By:
- Doležel, Jaroslav;
- Vrána, Jan;
- Šafář, Jan;
- Bartoš, Jan;
- Kubaláková, Marie;
- Šimková, Hana
Publication type:
Article
Functional features of a single chromosome arm in wheat (1AL) determined from its structure.
Published in:
Functional & Integrative Genomics, 2012, v. 12, n. 1, p. 173, doi. 10.1007/s10142-011-0250-3
By:
- Lucas, Stuart;
- Šimková, Hana;
- Šafář, Jan;
- Jurman, Irena;
- Cattonaro, Federica;
- Vautrin, Sonia;
- Bellec, Arnaud;
- Berges, Hélène;
- Doležel, Jaroslav;
- Budak, Hikmet
Publication type:
Article
Cobalt Based Catalysts on Alkali-Activated Zeolite Foams for N 2 O Decomposition.
Published in:
Catalysts (2073-4344), 2020, v. 10, n. 12, p. 1398, doi. 10.3390/catal10121398
By:
- Tišler, Zdeněk;
- Klegová, Anna;
- Svobodová, Eliška;
- Šafář, Jan;
- Strejcová, Kateřina;
- Kohout, Jan;
- Šlang, Stanislav;
- Pacultová, Kateřina;
- Rodríguez-Padrón, Daily;
- Bulánek, Roman
Publication type:
Article
Features of the organization of bread wheat chromosome 5BS based on physical mapping.
Published in:
BMC Genomics, 2018, v. 19, p. 1, doi. 10.1186/s12864-018-4470-y
By:
- Salina, Elena A.;
- Nesterov, Mikhail A.;
- Frenkel, Zeev;
- Kiseleva, Antonina A.;
- Timonova, Ekaterina M.;
- Magni, Federica;
- Vrána, Jan;
- Šafář, Jan;
- Šimková, Hana;
- Doležel, Jaroslav;
- Korol, Abraham;
- Sergeeva, Ekaterina M.
Publication type:
Article
BAC Libraries from Wheat Chromosome 7D: Efficient Tool for Positional Cloning of Aphid Resistance Genes.
Published in:
Journal of Biomedicine & Biotechnology, 2011, p. 1, doi. 10.1155/2011/302543
By:
- Šimková, Hana;
- Šafář, Jan;
- Kubaláková, Marie;
- Suchánková, Pavla;
- Číhalíková, Jarmila;
- Robert-Quatre, Heda;
- Azhaguvel, Perumal;
- Yiqun Weng;
- Peng, Junhua;
- Lapitan, Nora L. V.;
- Yaqin Ma;
- You, Frank M.;
- Ming-Cheng Luo;
- Bartoš, Jan;
- Doležel, Jaroslav
Publication type:
Article
Wild emmer wheat, the progenitor of modern bread wheat, exhibits great diversity in the VERNALIZATION1 gene.
Published in:
Frontiers in Plant Science, 2023, v. 13, p. 01, doi. 10.3389/fpls.2022.1106164
By:
- Strejčková, Beáta;
- Mazzucotelli, Elisabetta;
- Čegan, Radim;
- Milec, Zbynĕk;
- Brus, Jan;
- Çakır, Esra;
- Mastrangelo, Anna Maria;
- Özkan, Hakan;
- Šafář, Jan
Publication type:
Article
Contemplation on wheat vernalization.
Published in:
Frontiers in Plant Science, 2023, v. 13, p. 01, doi. 10.3389/fpls.2022.1093792
By:
- Milec, Zbynĕk;
- Strejčková, Beáta;
- Šafář, Jan
Publication type:
Article
A Panicum‐derived chromosomal segment captured by Hordeum a few million years ago preserves a set of stress‐related genes.
Published in:
Plant Journal, 2021, v. 105, n. 5, p. 1141, doi. 10.1111/tpj.15167
By:
- Mahelka, Václav;
- Krak, Karol;
- Fehrer, Judith;
- Caklová, Petra;
- Nagy Nejedlá, Michaela;
- Čegan, Radim;
- Kopecký, David;
- Šafář, Jan
Publication type:
Article
Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A.
Published in:
Plant Journal, 2014, v. 79, n. 2, p. 334, doi. 10.1111/tpj.12550
By:
- Poursarebani, Naser;
- Nussbaumer, Thomas;
- Šimková, Hana;
- Šafář, Jan;
- Witsenboer, Hanneke;
- Oeveren, Jan;
- Doležel, Jaroslav;
- Mayer, Klaus F.X.;
- Stein, Nils;
- Schnurbusch, Thorsten
Publication type:
Article
A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B.
Published in:
BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1803-y
By:
- Kobayashi, Fuminori;
- Jianzhong Wu;
- Kanamori, Hiroyuki;
- Tanaka, Tsuyoshi;
- Katagiri, Satoshi;
- Karasawa, Wataru;
- Kaneko, Satoko;
- Watanabe, Shota;
- Sakaguchi, Toyotaka;
- Hanawa, Yumiko;
- Fujisawa, Hiroko;
- Kurita, Kanako;
- Abe, Chikako;
- Iehisa, Julio C. M.;
- Ohno, Ryoko;
- Šafář, Jan;
- Šimková, Hana;
- Mukai, Yoshiyuki;
- Hamada, Masao;
- Saito, Mika
Publication type:
Article
A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B.
Published in:
BMC Genomics, 2015, v. 16, n. 1, p. 595, doi. 10.1186/s12864-015-1803-y
By:
- Fuminori Kobayashi;
- Jianzhong Wu;
- Hiroyuki Kanamori;
- Tsuyoshi Tanaka;
- Satoshi Katagiri;
- Wataru Karasawa;
- Satoko Kaneko;
- Shota Watanabe;
- Toyotaka Sakaguchi;
- Yumiko Hanawa;
- Hiroko Fujisawa;
- Kanako Kurita;
- Chikako Abe;
- Iehisa, Julio C. M.;
- Ryoko Ohno;
- Šafář, Jan;
- Šimková, Hana;
- Yoshiyuki Mukai;
- Masao Hamada;
- Mika Saito
Publication type:
Article
The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements.
Published in:
BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1641-y
By:
- Akpinar, Bala Ani;
- Magni, Federica;
- Yuce, Meral;
- Lucas, Stuart J.;
- Šimková, Hana;
- Šafář, Jan;
- Vautrin, Sonia;
- Bergès, Hélène;
- Cattonaro, Federica;
- Doležel, Jaroslav;
- Budak, Hikmet
Publication type:
Article
The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements
Published in:
BMC Genomics, 2015, v. 16, n. 1, p. 453, doi. 10.1186/s12864-015-1641-y
By:
- Akpinar, Bala Ani;
- Magni, Federica;
- Yuce, Meral;
- Lucas, Stuart J.;
- Hana Šimková;
- Jan Šafář;
- Vautrin, Sonia;
- Bergès, Hélène;
- Cattonaro, Federica;
- Jaroslav Doležel;
- Hikmet Budak
Publication type:
Article
Performance bounds for VDE‐SAT R‐Mode.
Published in:
International Journal of Satellite Communications & Networking, 2023, v. 41, n. 2, p. 134, doi. 10.1002/sat.1429
By:
- Šafář, Jan;
- Grant, Alan;
- Bransby, Martin
Publication type:
Article
The bacterial artificial chromosome (BAC) library of the narrow-leafed lupin ( Lupinus angustifolius L.).
Published in:
Cellular & Molecular Biology Letters, 2006, v. 11, n. 3, p. 396, doi. 10.2478/s11658-006-0033-3
By:
- Kasprzak, Andrzej;
- Šafář, Jan;
- Janda, Jaroslav;
- Doležel, Jaroslav;
- Wolko, Bogdan;
- Naganowska, Barbara
Publication type:
Article
Feasibility of physical map construction fromfingerprinted bacterial artificial chromosomelibraries of polyploid plant species.
Published in:
BMC Genomics, 2010, v. 11, p. 122, doi. 10.1186/1471-2164-11-122
By:
- Ming-Cheng Luo;
- Yaqin Ma;
- You, Frank M.;
- Anderson, Olin D.;
- Kopecký, David;
- Šimková, Hana;
- Šafář, Jan;
- Doležel, Jaroslav;
- Gill, Bikram;
- McGuire, Patrick E.;
- Dvorak, Jan
Publication type:
Article
Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley.
Published in:
BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-294
By:
- Šimková, Hana;
- Svensson, Jan T.;
- Condamine, Pascal;
- Hřibová, Eva;
- Suchánková, Pavla;
- Bhat, Prasanna R.;
- Bartoš, Jan;
- Šafář, Jan;
- Close, Timothy J.;
- Doležel, Jaroslav
Publication type:
Article
A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS).
Published in:
BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-237
By:
- Šimková, Hana;
- Šafář, Jan;
- Suchánková, Pavla;
- Kovářová, Pavlína;
- Bartoš, Jan;
- Kubaláková, Marie;
- Janda, Jaroslav;
- Číhalíková, Jarmila;
- Mago, Rohit;
- Lelley, Tamas;
- Doležel, Jaroslav
Publication type:
Article
Properties of RNase A Immobilized on Magnetic Poly(2-hydroxyethyl methacrylate) Microspheres.
Published in:
Biotechnology Progress, 2001, v. 17, n. 3, p. 447, doi. 10.1021/bp0100171
By:
- Horák, Daniel;
- Rittich, Bohuslav;
- Šafář, Jan;
- Španová, Alena;
- Lenfeld, Jiří;
- Beneš, Milan J.
Publication type:
Article
If Mendel Was Using CRISPR: Genome Editing Meets Non‐Mendelian Inheritance.
Published in:
Advanced Functional Materials, 2022, v. 32, n. 37, p. 1, doi. 10.1002/adfm.202202585
By:
- Hudzieczek, Vojtěch;
- Hobza, Roman;
- Cápal, Petr;
- Šafář, Jan;
- Doležel, Jaroslav
Publication type:
Article
Heritable heading time variation in wheat lines with the same number of Ppd-B1 gene copies.
Published in:
PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0183745
By:
- Ivaničová, Zuzana;
- Valárik, Miroslav;
- Pánková, Kateřina;
- Trávníčková, Martina;
- Doležel, Jaroslav;
- Šafář, Jan;
- Milec, Zbyněk
Publication type:
Article
In-Depth Sequence Analysis of Bread Wheat VRN1 Genes.
Published in:
International Journal of Molecular Sciences, 2021, v. 22, n. 22, p. 12284, doi. 10.3390/ijms222212284
By:
- Strejčková, Beáta;
- Milec, Zbyněk;
- Holušová, Kateřina;
- Cápal, Petr;
- Vojtková, Tereza;
- Čegan, Radim;
- Šafář, Jan
Publication type:
Article
Securing the Automatic Identification System (AIS): Using public key cryptography to prevent spoofing whilst retaining backwards compatibility.
Published in:
Journal of Navigation, 2022, v. 75, n. 2, p. 333, doi. 10.1017/S0373463321000837
By:
- Wimpenny, Gareth;
- Šafář, Jan;
- Grant, Alan;
- Bransby, Martin
Publication type:
Article
Performance Bounds for VDES R-mode.
Published in:
Journal of Navigation, 2020, v. 73, n. 1, p. 92, doi. 10.1017/S0373463319000559
By:
- Šafář, Jan;
- Grant, Alan;
- Williams, Paul;
- Ward, Nick
Publication type:
Article
Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat.
Published in:
BMC Plant Biology, 2012, v. 12, n. 1, p. 155, doi. 10.1186/1471-2229-12-155
By:
- Bartoš, Jan;
- Vlček, Čestmír;
- Choulet, Fr‚d‚ric;
- Džunková, M ria;
- Cviková, Kateřina;
- Šafář, Jan;
- Šimková, Hana;
- Pačes, Jan;
- Strnad, Hynek;
- Sourdille, Pierre;
- BergŠs, H‚lŠne;
- Cattonaro, Federica;
- Feuillet, Catherine;
- Doležel, Jaroslav
Publication type:
Article
A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome IR.
Published in:
BMC Plant Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2229-8-95
By:
- Bartoš, Jan;
- Paux, Etienne;
- Kofler, Robert;
- Havránková, Miroslava;
- Kopecký, David;
- Suchánková, Pavla;
- Šafář, Jan;
- Šimková, Hana;
- Town, Christopher D.;
- Lelley, Tamas;
- Feuillet, Catherine;
- Doležel, Jaroslav
Publication type:
Article
The transcriptome landscape of developing barley seeds.
Published in:
Plant Cell, 2024, v. 36, n. 7, p. 2512, doi. 10.1093/plcell/koae095
By:
- Kovacik, Martin;
- Nowicka, Anna;
- Zwyrtková, Jana;
- Strejčková, Beáta;
- Vardanega, Isaia;
- Esteban, Eddi;
- Pasha, Asher;
- Kaduchová, Kateřina;
- Krautsova, Maryna;
- Červenková, Marie;
- Šafář, Jan;
- Provart, Nicholas J;
- Simon, Rüdiger;
- Pecinka, Ales
Publication type:
Article
Intact ribosomal DNA arrays of Potentilla origin detected in Erythronium nucleus suggest recent eudicot‐to‐monocot horizontal transfer.
Published in:
New Phytologist, 2022, v. 235, n. 3, p. 1246, doi. 10.1111/nph.18171
By:
- Bartha, László;
- Mandáková, Terezie;
- Kovařík, Aleš;
- Bulzu, Paul‐Adrian;
- Rodde, Nathalie;
- Mahelka, Václav;
- Lysak, Martin A.;
- Fustier, Margaux‐Alison;
- Šafář, Jan;
- Cápal, Petr;
- Keresztes, Lujza;
- Banciu, Horia L.
Publication type:
Article
Fundamentally different repetitive element composition of sex chromosomes in Rumex acetosa.
Published in:
Annals of Botany, 2021, v. 127, n. 1, p. 33, doi. 10.1093/aob/mcaa160
By:
- Jesionek, Wojciech;
- Bodláková, Markéta;
- Kubát, Zdeněk;
- Čegan, Radim;
- Vyskot, Boris;
- Vrána, Jan;
- Šafář, Jan;
- Puterova, Janka;
- Hobza, Roman
Publication type:
Article
A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat.
Published in:
Genome Biology, 2013, v. 14, n. 6, p. 1, doi. 10.1186/gb-2013-14-6-r64
By:
- Philippe, Romain;
- Paux, Etienne;
- Bertin, Isabelle;
- Sourdille, Pierre;
- Choulet, Fréderic;
- Laugier, Christel;
- Šimková, Hana;
- Šafář, Jan;
- Bellec, Arnaud;
- Vautrin, Sonia;
- Frenkel, Zeev;
- Cattonaro, Federica;
- Magni, Federica;
- Scalabrin, Simone;
- Martis, Mihaela M.;
- Mayer, Klaus F.X.;
- Korol, Abraham;
- Bergès, Hélène;
- Doležel, Jaroslav;
- Feuillet, Catherine
Publication type:
Article
Divergence between bread wheat and Triticum militinae in the powdery mildew resistance QPm.tut-4A locus and its implications for cloning of the resistance gene.
Published in:
Theoretical & Applied Genetics, 2019, v. 132, n. 4, p. 1061, doi. 10.1007/s00122-018-3259-3
By:
- Janáková, Eva;
- Jakobson, Irena;
- Peusha, Hilma;
- Abrouk, Michael;
- Škopová, Monika;
- Šimková, Hana;
- Šafář, Jan;
- Vrána, Jan;
- Doležel, Jaroslav;
- Järve, Kadri;
- Valárik, Miroslav
Publication type:
Article
Identification of polycomb repressive complex 1 and 2 core components in hexaploid bread wheat.
Published in:
BMC Plant Biology, 2020, v. 20, n. 1, p. 1, doi. 10.1186/s12870-020-02384-6
By:
- Strejčková, Beáta;
- Čegan, Radim;
- Pecinka, Ales;
- Milec, Zbyněk;
- Šafář, Jan
Publication type:
Article
Catalyst for Selective Hydrogenolysis of Glycerol, Prepared from Hydrotalcite-Like Structures.
Published in:
Topics in Catalysis, 2018, v. 61, n. 15-17, p. 1746, doi. 10.1007/s11244-018-1005-3
By:
- Kolena, Jiří;
- Skuhrovcová, Lenka;
- Kocík, Jaroslav;
- Šafář, Jan;
- Kupčík, Jaroslav
Publication type:
Article
Correction: Heritable heading time variation in wheat lines with the same number of Ppd-B1 gene copies.
Published in:
2018
By:
- Ivaničová, Zuzana;
- Valárik, Miroslav;
- Pánková, Kateřina;
- Trávníčková, Martina;
- Doležel, Jaroslav;
- Šafář, Jan;
- Milec, Zbyněk
Publication type:
Correction Notice
Modified Alkali Activated Zeolite Foams with Improved Textural and Mechanical Properties.
Published in:
Minerals (2075-163X), 2020, v. 10, n. 5, p. 483, doi. 10.3390/min10050483
By:
- Hrachovcová, Kateřina;
- Tišler, Zdeněk;
- Svobodová, Eliška;
- Šafář, Jan
Publication type:
Article
Acid and Thermal Treatment of Alkali-Activated Zeolite Foams.
Published in:
Minerals (2075-163X), 2019, v. 9, n. 12, p. 719, doi. 10.3390/min9120719
By:
- Tišler, Zdeněk;
- Hrachovcová, Kateřina;
- Svobodová, Eliška;
- Šafář, Jan;
- Pelíšková, Lenka
Publication type:
Article
A Physical Map of the Short Arm of Wheat Chromosome 1A.
Published in:
PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0080272
By:
- Breen, James;
- Wicker, Thomas;
- Shatalina, Margarita;
- Frenkel, Zeev;
- Bertin, Isabelle;
- Philippe, Romain;
- Spielmeyer, Wolfgang;
- Šimková, Hana;
- Šafář, Jan;
- Cattonaro, Federica;
- Scalabrin, Simone;
- Magni, Federica;
- Vautrin, Sonia;
- Bergès, Hélène;
- Paux, Etienne;
- Fahima, Tzion;
- Doležel, Jaroslav;
- Korol, Abraham;
- Feuillet, Catherine;
- Keller, Beat
Publication type:
Article
Physical Mapping Integrated with Syntenic Analysis to Characterize the Gene Space of the Long Arm of Wheat Chromosome 1A.
Published in:
PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0059542
By:
- Lucas, Stuart J.;
- Akpınar, Bala Anı;
- Kantar, Melda;
- Weinstein, Zohar;
- Aydınoğlu, Fatma;
- Šafář, Jan;
- Šimková, Hana;
- Frenkel, Zeev;
- Korol, Abraham;
- Magni, Federica;
- Cattonaro, Federica;
- Vautrin, Sonia;
- Bellec, Arnaud;
- Bergès, Hélène;
- Doležel, Jaroslav;
- Budak, Hikmet
Publication type:
Article
Genomic Diversity in Two Related Plant Species with and without Sex Chromosomes - Silene latifolia and S. vulgaris.
Published in:
PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0031898
By:
- Cegan, Radim;
- Vyskot, Boris;
- Kejnovsky, Eduard;
- Kubat, Zdenek;
- Blavet, Hana;
- Šafář, Jan;
- Dolezžel, Jaroslav;
- Blavet, Nicolas;
- Hobza, Roman
Publication type:
Article
A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat.
Published in:
Plant Physiology, 2011, v. 157, n. 4, p. 1596, doi. 10.1104/pp.111.183921
By:
- Rustenholz, Camille;
- Choulet, Frédéric;
- Laugier, Christel;
- Šafář, Jan;
- Šimková, Hana;
- Doležel, Jaroslav;
- Magni, Federica;
- Scalabrin, Simone;
- Cattonaro, Federica;
- Vautrin, Sonia;
- Bellec, Arnaud;
- Bergès, Hélène;
- Feuillet, Catherine;
- Paux, Etienne
Publication type:
Article