Works by Šafář, Jan

Results: 41

A Panicum‐derived chromosomal segment captured by Hordeum a few million years ago preserves a set of stress‐related genes.

Published in:

Plant Journal, 2021, v. 105, n. 5, p. 1141, doi. 10.1111/tpj.15167

By:

Mahelka, Václav;
Krak, Karol;
Fehrer, Judith;
Caklová, Petra;
Nagy Nejedlá, Michaela;
Čegan, Radim;
Kopecký, David;
Šafář, Jan

Publication type:

Article

Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A.

Published in:

Plant Journal, 2014, v. 79, n. 2, p. 334, doi. 10.1111/tpj.12550

By:

Poursarebani, Naser;
Nussbaumer, Thomas;
Šimková, Hana;
Šafář, Jan;
Witsenboer, Hanneke;
Oeveren, Jan;
Doležel, Jaroslav;
Mayer, Klaus F.X.;
Stein, Nils;
Schnurbusch, Thorsten

Publication type:

Article

The bacterial artificial chromosome (BAC) library of the narrow-leafed lupin ( Lupinus angustifolius L.).

Published in:

Cellular & Molecular Biology Letters, 2006, v. 11, n. 3, p. 396, doi. 10.2478/s11658-006-0033-3

By:

Kasprzak, Andrzej;
Šafář, Jan;
Janda, Jaroslav;
Doležel, Jaroslav;
Wolko, Bogdan;
Naganowska, Barbara

Publication type:

Article

Cobalt Based Catalysts on Alkali-Activated Zeolite Foams for N 2 O Decomposition.

Published in:

Catalysts (2073-4344), 2020, v. 10, n. 12, p. 1398, doi. 10.3390/catal10121398

By:

Tišler, Zdeněk;
Klegová, Anna;
Svobodová, Eliška;
Šafář, Jan;
Strejcová, Kateřina;
Kohout, Jan;
Šlang, Stanislav;
Pacultová, Kateřina;
Rodríguez-Padrón, Daily;
Bulánek, Roman

Publication type:

Article

Intact ribosomal DNA arrays of Potentilla origin detected in Erythronium nucleus suggest recent eudicot‐to‐monocot horizontal transfer.

Published in:

New Phytologist, 2022, v. 235, n. 3, p. 1246, doi. 10.1111/nph.18171

By:

Bartha, László;
Mandáková, Terezie;
Kovařík, Aleš;
Bulzu, Paul‐Adrian;
Rodde, Nathalie;
Mahelka, Václav;
Lysak, Martin A.;
Fustier, Margaux‐Alison;
Šafář, Jan;
Cápal, Petr;
Keresztes, Lujza;
Banciu, Horia L.

Publication type:

Article

Identification of polycomb repressive complex 1 and 2 core components in hexaploid bread wheat.

Published in:

BMC Plant Biology, 2020, v. 20, n. 1, p. 1, doi. 10.1186/s12870-020-02384-6

By:

Strejčková, Beáta;
Čegan, Radim;
Pecinka, Ales;
Milec, Zbyněk;
Šafář, Jan

Publication type:

Article

Chromosomes in the flow to simplify genome analysis.

Published in:

Functional & Integrative Genomics, 2012, v. 12, n. 3, p. 397, doi. 10.1007/s10142-012-0293-0

By:

Doležel, Jaroslav;
Vrána, Jan;
Šafář, Jan;
Bartoš, Jan;
Kubaláková, Marie;
Šimková, Hana

Publication type:

Article

Functional features of a single chromosome arm in wheat (1AL) determined from its structure.

Published in:

Functional & Integrative Genomics, 2012, v. 12, n. 1, p. 173, doi. 10.1007/s10142-011-0250-3

By:

Lucas, Stuart;
Šimková, Hana;
Šafář, Jan;
Jurman, Irena;
Cattonaro, Federica;
Vautrin, Sonia;
Bellec, Arnaud;
Berges, Hélène;
Doležel, Jaroslav;
Budak, Hikmet

Publication type:

Article

In-Depth Sequence Analysis of Bread Wheat VRN1 Genes.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 22, p. 12284, doi. 10.3390/ijms222212284

By:

Strejčková, Beáta;
Milec, Zbyněk;
Holušová, Kateřina;
Cápal, Petr;
Vojtková, Tereza;
Čegan, Radim;
Šafář, Jan

Publication type:

Article

The transcriptome landscape of developing barley seeds.

Published in:

Plant Cell, 2024, v. 36, n. 7, p. 2512, doi. 10.1093/plcell/koae095

By:

Kovacik, Martin;
Nowicka, Anna;
Zwyrtková, Jana;
Strejčková, Beáta;
Vardanega, Isaia;
Esteban, Eddi;
Pasha, Asher;
Kaduchová, Kateřina;
Krautsova, Maryna;
Červenková, Marie;
Šafář, Jan;
Provart, Nicholas J;
Simon, Rüdiger;
Pecinka, Ales

Publication type:

Article

Performance bounds for VDE‐SAT R‐Mode.

Published in:

International Journal of Satellite Communications & Networking, 2023, v. 41, n. 2, p. 134, doi. 10.1002/sat.1429

By:

Šafář, Jan;
Grant, Alan;
Bransby, Martin

Publication type:

Article

Correction: Heritable heading time variation in wheat lines with the same number of Ppd-B1 gene copies.

Published in:

2018

By:

Ivaničová, Zuzana;
Valárik, Miroslav;
Pánková, Kateřina;
Trávníčková, Martina;
Doležel, Jaroslav;
Šafář, Jan;
Milec, Zbyněk

Publication type:

Correction Notice

Heritable heading time variation in wheat lines with the same number of Ppd-B1 gene copies.

Published in:

PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0183745

By:

Ivaničová, Zuzana;
Valárik, Miroslav;
Pánková, Kateřina;
Trávníčková, Martina;
Doležel, Jaroslav;
Šafář, Jan;
Milec, Zbyněk

Publication type:

Article

Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat.

Published in:

BMC Plant Biology, 2012, v. 12, n. 1, p. 155, doi. 10.1186/1471-2229-12-155

By:

Bartoš, Jan;
Vlček, Čestmír;
Choulet, Fr‚d‚ric;
Džunková, M ria;
Cviková, Kateřina;
Šafář, Jan;
Šimková, Hana;
Pačes, Jan;
Strnad, Hynek;
Sourdille, Pierre;
BergŠs, H‚lŠne;
Cattonaro, Federica;
Feuillet, Catherine;
Doležel, Jaroslav

Publication type:

Article

A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome IR.

Published in:

BMC Plant Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2229-8-95

By:

Bartoš, Jan;
Paux, Etienne;
Kofler, Robert;
Havránková, Miroslava;
Kopecký, David;
Suchánková, Pavla;
Šafář, Jan;
Šimková, Hana;
Town, Christopher D.;
Lelley, Tamas;
Feuillet, Catherine;
Doležel, Jaroslav

Publication type:

Article

A new wild emmer wheat panel allows to map new loci associated with resistance to stem rust at seedling stage.

Published in:

Plant Genome, 2025, v. 18, n. 1, p. 1, doi. 10.1002/tpg2.20413

By:

Mastrangelo, Anna Maria;
Roncallo, Pablo;
Matny, Oadi;
Čegan, Radim;
Steffenson, Brian;
Echenique, Viviana;
Šafář, Jan;
Battaglia, Raffaella;
Barabaschi, Delfina;
Cattivelli, Luigi;
Özkan, Hakan;
Mazzucotelli, Elisabetta

Publication type:

Article

A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1803-y

By:

Kobayashi, Fuminori;
Jianzhong Wu;
Kanamori, Hiroyuki;
Tanaka, Tsuyoshi;
Katagiri, Satoshi;
Karasawa, Wataru;
Kaneko, Satoko;
Watanabe, Shota;
Sakaguchi, Toyotaka;
Hanawa, Yumiko;
Fujisawa, Hiroko;
Kurita, Kanako;
Abe, Chikako;
Iehisa, Julio C. M.;
Ohno, Ryoko;
Šafář, Jan;
Šimková, Hana;
Mukai, Yoshiyuki;
Hamada, Masao;
Saito, Mika

Publication type:

Article

A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 595, doi. 10.1186/s12864-015-1803-y

By:

Fuminori Kobayashi;
Jianzhong Wu;
Hiroyuki Kanamori;
Tsuyoshi Tanaka;
Satoshi Katagiri;
Wataru Karasawa;
Satoko Kaneko;
Shota Watanabe;
Toyotaka Sakaguchi;
Yumiko Hanawa;
Hiroko Fujisawa;
Kanako Kurita;
Chikako Abe;
Iehisa, Julio C. M.;
Ryoko Ohno;
Šafář, Jan;
Šimková, Hana;
Yoshiyuki Mukai;
Masao Hamada;
Mika Saito

Publication type:

Article

The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1641-y

By:

Akpinar, Bala Ani;
Magni, Federica;
Yuce, Meral;
Lucas, Stuart J.;
Šimková, Hana;
Šafář, Jan;
Vautrin, Sonia;
Bergès, Hélène;
Cattonaro, Federica;
Doležel, Jaroslav;
Budak, Hikmet

Publication type:

Article

The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 453, doi. 10.1186/s12864-015-1641-y

By:

Akpinar, Bala Ani;
Magni, Federica;
Yuce, Meral;
Lucas, Stuart J.;
Hana Šimková;
Jan Šafář;
Vautrin, Sonia;
Bergès, Hélène;
Cattonaro, Federica;
Jaroslav Doležel;
Hikmet Budak

Publication type:

Article

Wild emmer wheat, the progenitor of modern bread wheat, exhibits great diversity in the VERNALIZATION1 gene.

Published in:

Frontiers in Plant Science, 2023, v. 13, p. 01, doi. 10.3389/fpls.2022.1106164

By:

Strejčková, Beáta;
Mazzucotelli, Elisabetta;
Čegan, Radim;
Milec, Zbynĕk;
Brus, Jan;
Çakır, Esra;
Mastrangelo, Anna Maria;
Özkan, Hakan;
Šafář, Jan

Publication type:

Article

Contemplation on wheat vernalization.

Published in:

Frontiers in Plant Science, 2023, v. 13, p. 01, doi. 10.3389/fpls.2022.1093792

By:

Milec, Zbynĕk;
Strejčková, Beáta;
Šafář, Jan

Publication type:

Article

A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat.

Published in:

Plant Physiology, 2011, v. 157, n. 4, p. 1596, doi. 10.1104/pp.111.183921

By:

Rustenholz, Camille;
Choulet, Frédéric;
Laugier, Christel;
Šafář, Jan;
Šimková, Hana;
Doležel, Jaroslav;
Magni, Federica;
Scalabrin, Simone;
Cattonaro, Federica;
Vautrin, Sonia;
Bellec, Arnaud;
Bergès, Hélène;
Feuillet, Catherine;
Paux, Etienne

Publication type:

Article

Divergence between bread wheat and Triticum militinae in the powdery mildew resistance QPm.tut-4A locus and its implications for cloning of the resistance gene.

Published in:

Theoretical & Applied Genetics, 2019, v. 132, n. 4, p. 1061, doi. 10.1007/s00122-018-3259-3

By:

Janáková, Eva;
Jakobson, Irena;
Peusha, Hilma;
Abrouk, Michael;
Škopová, Monika;
Šimková, Hana;
Šafář, Jan;
Vrána, Jan;
Doležel, Jaroslav;
Järve, Kadri;
Valárik, Miroslav

Publication type:

Article

Features of the organization of bread wheat chromosome 5BS based on physical mapping.

Published in:

BMC Genomics, 2018, v. 19, p. 1, doi. 10.1186/s12864-018-4470-y

By:

Salina, Elena A.;
Nesterov, Mikhail A.;
Frenkel, Zeev;
Kiseleva, Antonina A.;
Timonova, Ekaterina M.;
Magni, Federica;
Vrána, Jan;
Šafář, Jan;
Šimková, Hana;
Doležel, Jaroslav;
Korol, Abraham;
Sergeeva, Ekaterina M.

Publication type:

Article

Securing the Automatic Identification System (AIS): Using public key cryptography to prevent spoofing whilst retaining backwards compatibility.

Published in:

Journal of Navigation, 2022, v. 75, n. 2, p. 333, doi. 10.1017/S0373463321000837

By:

Wimpenny, Gareth;
Šafář, Jan;
Grant, Alan;
Bransby, Martin

Publication type:

Article

Performance Bounds for VDES R-mode.

Published in:

Journal of Navigation, 2020, v. 73, n. 1, p. 92, doi. 10.1017/S0373463319000559

By:

Šafář, Jan;
Grant, Alan;
Williams, Paul;
Ward, Nick

Publication type:

Article

Catalyst for Selective Hydrogenolysis of Glycerol, Prepared from Hydrotalcite-Like Structures.

Published in:

Topics in Catalysis, 2018, v. 61, n. 15-17, p. 1746, doi. 10.1007/s11244-018-1005-3

By:

Kolena, Jiří;
Skuhrovcová, Lenka;
Kocík, Jaroslav;
Šafář, Jan;
Kupčík, Jaroslav

Publication type:

Article

A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat.

Published in:

Genome Biology, 2013, v. 14, n. 6, p. 1, doi. 10.1186/gb-2013-14-6-r64

By:

Philippe, Romain;
Paux, Etienne;
Bertin, Isabelle;
Sourdille, Pierre;
Choulet, Fréderic;
Laugier, Christel;
Šimková, Hana;
Šafář, Jan;
Bellec, Arnaud;
Vautrin, Sonia;
Frenkel, Zeev;
Cattonaro, Federica;
Magni, Federica;
Scalabrin, Simone;
Martis, Mihaela M.;
Mayer, Klaus F.X.;
Korol, Abraham;
Bergès, Hélène;
Doležel, Jaroslav;
Feuillet, Catherine

Publication type:

Article

Properties of RNase A Immobilized on Magnetic Poly(2-hydroxyethyl methacrylate) Microspheres.

Published in:

Biotechnology Progress, 2001, v. 17, n. 3, p. 447, doi. 10.1021/bp0100171

By:

Horák, Daniel;
Rittich, Bohuslav;
Šafář, Jan;
Španová, Alena;
Lenfeld, Jiří;
Beneš, Milan J.

Publication type:

Article

Fundamentally different repetitive element composition of sex chromosomes in Rumex acetosa.

Published in:

Annals of Botany, 2021, v. 127, n. 1, p. 33, doi. 10.1093/aob/mcaa160

By:

Jesionek, Wojciech;
Bodláková, Markéta;
Kubát, Zdeněk;
Čegan, Radim;
Vyskot, Boris;
Vrána, Jan;
Šafář, Jan;
Puterova, Janka;
Hobza, Roman

Publication type:

Article

A Physical Map of the Short Arm of Wheat Chromosome 1A.

Published in:

PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0080272

By:

Breen, James;
Wicker, Thomas;
Shatalina, Margarita;
Frenkel, Zeev;
Bertin, Isabelle;
Philippe, Romain;
Spielmeyer, Wolfgang;
Šimková, Hana;
Šafář, Jan;
Cattonaro, Federica;
Scalabrin, Simone;
Magni, Federica;
Vautrin, Sonia;
Bergès, Hélène;
Paux, Etienne;
Fahima, Tzion;
Doležel, Jaroslav;
Korol, Abraham;
Feuillet, Catherine;
Keller, Beat

Publication type:

Article

Physical Mapping Integrated with Syntenic Analysis to Characterize the Gene Space of the Long Arm of Wheat Chromosome 1A.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0059542

By:

Lucas, Stuart J.;
Akpınar, Bala Anı;
Kantar, Melda;
Weinstein, Zohar;
Aydınoğlu, Fatma;
Šafář, Jan;
Šimková, Hana;
Frenkel, Zeev;
Korol, Abraham;
Magni, Federica;
Cattonaro, Federica;
Vautrin, Sonia;
Bellec, Arnaud;
Bergès, Hélène;
Doležel, Jaroslav;
Budak, Hikmet

Publication type:

Article

Genomic Diversity in Two Related Plant Species with and without Sex Chromosomes - Silene latifolia and S. vulgaris.

Published in:

PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0031898

By:

Cegan, Radim;
Vyskot, Boris;
Kejnovsky, Eduard;
Kubat, Zdenek;
Blavet, Hana;
Šafář, Jan;
Dolezžel, Jaroslav;
Blavet, Nicolas;
Hobza, Roman

Publication type:

Article

BAC Libraries from Wheat Chromosome 7D: Efficient Tool for Positional Cloning of Aphid Resistance Genes.

Published in:

Journal of Biomedicine & Biotechnology, 2011, p. 1, doi. 10.1155/2011/302543

By:

Šimková, Hana;
Šafář, Jan;
Kubaláková, Marie;
Suchánková, Pavla;
Číhalíková, Jarmila;
Robert-Quatre, Heda;
Azhaguvel, Perumal;
Yiqun Weng;
Peng, Junhua;
Lapitan, Nora L. V.;
Yaqin Ma;
You, Frank M.;
Ming-Cheng Luo;
Bartoš, Jan;
Doležel, Jaroslav

Publication type:

Article

If Mendel Was Using CRISPR: Genome Editing Meets Non‐Mendelian Inheritance.

Published in:

Advanced Functional Materials, 2022, v. 32, n. 37, p. 1, doi. 10.1002/adfm.202202585

By:

Hudzieczek, Vojtěch;
Hobza, Roman;
Cápal, Petr;
Šafář, Jan;
Doležel, Jaroslav

Publication type:

Article

Modified Alkali Activated Zeolite Foams with Improved Textural and Mechanical Properties.

Published in:

Minerals (2075-163X), 2020, v. 10, n. 5, p. 483, doi. 10.3390/min10050483

By:

Hrachovcová, Kateřina;
Tišler, Zdeněk;
Svobodová, Eliška;
Šafář, Jan

Publication type:

Article

Acid and Thermal Treatment of Alkali-Activated Zeolite Foams.

Published in:

Minerals (2075-163X), 2019, v. 9, n. 12, p. 719, doi. 10.3390/min9120719

By:

Tišler, Zdeněk;
Hrachovcová, Kateřina;
Svobodová, Eliška;
Šafář, Jan;
Pelíšková, Lenka

Publication type:

Article

Feasibility of physical map construction fromfingerprinted bacterial artificial chromosomelibraries of polyploid plant species.

Published in:

BMC Genomics, 2010, v. 11, p. 122, doi. 10.1186/1471-2164-11-122

By:

Ming-Cheng Luo;
Yaqin Ma;
You, Frank M.;
Anderson, Olin D.;
Kopecký, David;
Šimková, Hana;
Šafář, Jan;
Doležel, Jaroslav;
Gill, Bikram;
McGuire, Patrick E.;
Dvorak, Jan

Publication type:

Article

Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-294

By:

Šimková, Hana;
Svensson, Jan T.;
Condamine, Pascal;
Hřibová, Eva;
Suchánková, Pavla;
Bhat, Prasanna R.;
Bartoš, Jan;
Šafář, Jan;
Close, Timothy J.;
Doležel, Jaroslav

Publication type:

Article

A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS).

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-237

By:

Šimková, Hana;
Šafář, Jan;
Suchánková, Pavla;
Kovářová, Pavlína;
Bartoš, Jan;
Kubaláková, Marie;
Janda, Jaroslav;
Číhalíková, Jarmila;
Mago, Rohit;
Lelley, Tamas;
Doležel, Jaroslav

Publication type:

Article