Works matching IS 03051048 AND DT 2009 AND VI 37 AND IP 4

Results: 42

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Published in:: Nucleic Acids Research, 2009, v. 37, n. 4, p. iii, doi. 10.1093/nar/gkn1021
Publication type:: Article

Transcriptional control by adenovirus E1A conserved region 3 via p300/CBP.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1095, doi. 10.1093/nar/gkn1057

By:

Pelka, Peter;
Ablack, Jailal N. G.;
Torchia, Joseph;
Turnell, Andrew S.;
Grand, Roger J. A.;
Mymryk, Joe S.

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 4, p. i, doi. 10.1093/nar/gkp008
Publication type:: Article

Darwinian evolution in the light of genomics.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1011

By:

Koonin, Eugene V.

Publication type:

Article

A rapid non-radioactive technique for measurement of repair synthesis in primary human fibroblasts by incorporation of ethynyl deoxyuridine (EdU).

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e31

By:

Limsirichaikul, Siripan;
Niimi, Atsuko;
Fawcett, Heather;
Lehmann, Alan;
Yamashita, Shunichi;
Ogi, Tomoo

Publication type:

Article

Mutually exclusive STAT1 modifications identified by Ubc9/substrate dimerization-dependent SUMOylation.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e30

By:

Zimnik, Susan;
Gaestel, Matthias;
Niedenthal, Rainer

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 4, p. ii, doi. 10.1093/nar/gkn1016
Publication type:: Article

An insulator element 3′ to the CFTR gene binds CTCF and reveals an active chromatin hub in primary cells.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1086, doi. 10.1093/nar/gkn1056

By:

Blackledge, Neil P.;
Ott, Christopher J.;
Gillen, Austin E.;
Harris, Ann

Publication type:

Article

Oxidation of a single active site suffices for the functional inactivation of the dimeric Bacillus subtilis OhrR repressor in vitro.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1174, doi. 10.1093/nar/gkn1052

By:

Eiamphungporn, Warawan;
Soonsanga, Sumarin;
Lee, Jin-Won;
Helmann, John D.

Publication type:

Article

A ChIP–chip approach reveals a novel role for transcription factor IRF1 in the DNA damage response.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1073, doi. 10.1093/nar/gkn1051

By:

Frontini, Mattia;
Vijayakumar, Meeraa;
Garvin, Alexander;
Clarke, Nicole

Publication type:

Article

A genetic screen for components of the mammalian RNA interference pathway in Bloom-deficient mouse embryonic stem cells.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e34

By:

Trombly, Melanie I.;
Su, Hong;
Wang, Xiaozhong

Publication type:

Article

A synthetic mammalian electro-genetic transcription circuit.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e33

By:

Weber, Wilfried;
Luzi, Stefan;
Karlsson, Maria;
Sanchez-Bustamante, Carlota Diaz;
Frey, Urs;
Hierlemann, Andreas;
Fussenegger, Martin

Publication type:

Article

Real-time single-molecule observation of rolling-circle DNA replication.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e27, doi. 10.1093/nar/gkp006

By:

Tanner, Nathan A.;
Loparo, Joseph J.;
Hamdan, Samir M.;
Jergic, Slobodan;
Dixon, Nicholas E.;
van Oijen, Antoine M.

Publication type:

Article

Synthesis and characterization of 2′-modified-4′-thioRNA: a comprehensive comparison of nuclease stability.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1353, doi. 10.1093/nar/gkn1088

By:

Takahashi, Mayumi;
Minakawa, Noriaki;
Matsuda, Akira

Publication type:

Article

A novel approach for organelle-specific DNA damage targeting reveals different susceptibility of mitochondrial DNA to the anticancer drugs camptothecin and topotecan.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e26, doi. 10.1093/nar/gkn1087

By:

de la Loza, M. C. Díaz;
Wellinger, R. E.

Publication type:

Article

A bridged nucleic acid, 2′,4′-BNACOC: synthesis of fully modified oligonucleotides bearing thymine, 5-methylcytosine, adenine and guanine 2′,4′-BNACOC monomers and RNA-selective nucleic-acid recognition.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1225, doi. 10.1093/nar/gkn1062

By:

Mitsuoka, Yasunori;
Kodama, Tetsuya;
Ohnishi, Ryo;
Hari, Yoshiyuki;
Imanishi, Takeshi;
Obika, Satoshi

Publication type:

Article

Binding to DNA of the RNA-polymerase II C-terminal domain allows discrimination between Cdk7 and Cdk9 phosphorylation.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1260

By:

Lolli, Graziano

Publication type:

Article

DNA triplex formation with 5-dimethylaminopropargyl deoxyuridine.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1288, doi. 10.1093/nar/gkn1060

By:

Rusling, David A.;
Peng, Guomei;
Srinivasan, Natarajan;
Fox, Keith R.;
Brown, Tom

Publication type:

Article

FRAXE-associated mental retardation protein (FMR2) is an RNA-binding protein with high affinity for G-quartet RNA forming structure.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1269, doi. 10.1093/nar/gkn1058

By:

Bensaid, Mounia;
Melko, Mireille;
Bechara, Elias G.;
Davidovic, Laetitia;
Berretta, Antonio;
Catania, Maria Vincenza;
Gecz, Jozef;
Lalli, Enzo;
Bardoni, Barbara

Publication type:

Article

The G140S mutation in HIV integrases from raltegravir-resistant patients rescues catalytic defect due to the resistance Q148H mutation.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1193

By:

Delelis, Olivier;
Malet, Isabelle;
Na, Li;
Tchertanov, Luba;
Calvez, Vincent;
Marcelin, Anne-Genevieve;
Subra, Frederic;
Deprez, Eric;
Mouscadet, Jean-François

Publication type:

Article

Structure and expression analysis of rice paleo duplications.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1248

By:

Throude, Mickael;
Bolot, Stéphanie;
Bosio, Mickael;
Pont, Caroline;
Sarda, Xavier;
Quraishi, Umar Masood;
Bourgis, Fabienne;
Lessard, Philippe;
Rogowsky, Peter;
Ghesquiere, Alain;
Murigneux, Alain;
Charmet, Gilles;
Perez, Pascual;
Salse, Jérôme

Publication type:

Article

Identification of pregnane-X receptor target genes and coactivator and corepressor binding to promoter elements in human hepatocytes.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1160, doi. 10.1093/nar/gkn1047

By:

Hariparsad, Niresh;
Chu, Xiaoyan;
Yabut, Jocelyn;
Labhart, Paul;
Hartley, Dylan P.;
Dai, Xudong;
Evers, Raymond

Publication type:

Article

Structural and biochemical characterization of MepR, a multidrug binding transcription regulator of the Staphylococcus aureus multidrug efflux pump MepA.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1211, doi. 10.1093/nar/gkn1046

By:

Kumaraswami, Muthiah;
Schuman, Jason T.;
Seo, Susan M.;
Kaatz, Glenn W.;
Brennan, Richard G.

Publication type:

Article

Finding 3D motifs in ribosomal RNA structures.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e29

By:

Apostolico, Alberto;
Ciriello, Giovanni;
Guerra, Concettina;
Heitsch, Christine E.;
Hsiao, Chiaolong;
Williams, Loren Dean

Publication type:

Article

Discovery of novel triple helical DNA intercalators by an integrated virtual and actual screening platform.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1280, doi. 10.1093/nar/gkn1043

By:

Holt, Patrick A.;
Ragazzon, Patricia;
Strekowski, Lucjan;
Chaires, Jonathan B.;
Trent, John O.

Publication type:

Article

Caenorhabditis elegans cisRED: a catalogue of conserved genomic elements.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1323, doi. 10.1093/nar/gkn1041

By:

Sleumer, Monica C.;
Bilenky, Mikhail;
He, An;
Robertson, Gordon;
Thiessen, Nina;
Jones, Steven J. M.

Publication type:

Article

Insights into the pre-initiation events of bacteriophage φ6 RNA-dependent RNA polymerase: towards the assembly of a productive binary complex.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1182, doi. 10.1093/nar/gkn1035

By:

Sarin, L. Peter;
Poranen, Minna M.;
Lehti, N. Marika;
Ravantti, Janne J.;
Koivunen, Minni R. L.;
Aalto, Antti P.;
van Dijk, Alberdina A.;
Stuart, David I.;
Grimes, Jonathan M.;
Bamford, Dennis H.

Publication type:

Article

The Torso signaling pathway modulates a dual transcriptional switch to regulate tailless expression.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1061, doi. 10.1093/nar/gkn1036

By:

Chen, Yu-Chien;
Lin, Suewei I.;
Chen, Ying-Kuan;
Chiang, Chuen-Sheue;
Liaw, Gwo-Jen

Publication type:

Article

Specificity of the ribosomal A site for aminoacyl-tRNAs.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1202

By:

Dale, Taraka;
Fahlman, Richard P.;
Olejniczak, Mikołaj;
Uhlenbeck, Olke C.

Publication type:

Article

Scintillation proximity assay for measurement of RNA methylation.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e32

By:

Baker, Matthew R.;
Zarubica, Tamara;
Wright, H. Tonie;
Rife, Jason P.

Publication type:

Article

Deficiency of the tRNATyr:Ψ35-synthase aPus7 in Archaea of the Sulfolobales order might be rescued by the H/ACA sRNA-guided machinery.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1308, doi. 10.1093/nar/gkn1037

By:

Muller, Sébastien;
Urban, Alan;
Hecker, Arnaud;
Leclerc, Fabrice;
Branlant, Christiane;
Motorin, Yuri

Publication type:

Article

DNA modification of live cell surface.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. e28, doi. 10.1093/nar/gkn1034

By:

Borisenko, Grigory G.;
Zaitseva, Marina A.;
Chuvilin, Andrey N.;
Pozmogova, Galina E.

Publication type:

Article

Telomerase activity is associated with an increase in DNA methylation at the proximal subtelomere and a reduction in telomeric transcription.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1152, doi. 10.1093/nar/gkn1030

By:

Ng, Laura J.;
Cropley, Jennifer E.;
Pickett, Hilda A.;
Reddel, Roger R.;
Suter, Catherine M.

Publication type:

Article

Identification of an inter-transcription factor regulatory network in human hepatoma cells by Matrix RNAi.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1049, doi. 10.1093/nar/gkn1028

By:

Tomaru, Yasuhiro;
Nakanishi, Misato;
Miura, Hisashi;
Kimura, Yasumasa;
Ohkawa, Hiroki;
Ohta, Yusuke;
Hayashizaki, Yoshihide;
Suzuki, Masanori

Publication type:

Article

Positioning of subdomain IIId and apical loop of domain II of the hepatitis C IRES on the human 40S ribosome.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1141

By:

Babaylova, Elena;
Graifer, Dmitri;
Malygin, Alexey;
Stahl, Joachim;
Shatsky, Ivan;
Karpova, Galina

Publication type:

Article

Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1239, doi. 10.1093/nar/gkn1025

By:

Clark, Karl J.;
Carlson, Daniel F.;
Leaver, Michael J.;
Foster, Linda K.;
Fahrenkrug, Scott C.

Publication type:

Article

Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1335, doi. 10.1093/nar/gkn1023

By:

Noma, Akiko;
Sakaguchi, Yuriko;
Suzuki, Tsutomu

Publication type:

Article

Molecular characterization of Mybbp1a as a co-repressor on the Period2 promoter.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1115

By:

Hara, Yasuhiro;
Onishi, Yoshiaki;
Oishi, Katsutaka;
Miyazaki, Koyomi;
Fukamizu, Akiyoshi;
Ishida, Norio

Publication type:

Article

The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1127, doi. 10.1093/nar/gkn1020

By:

Schneider, Claudia;
Leung, Eileen;
Brown, Jeremy;
Tollervey, David

Publication type:

Article

Genome-wide analysis to predict protein sequence variations that change phosphorylation sites or their corresponding kinases.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1297, doi. 10.1093/nar/gkn1008

By:

Ryu, Gil-Mi;
Song, Pamela;
Kim, Kyu-Won;
Oh, Kyung-Soo;
Park, Keun-Joon;
Kim, Jong Hun

Publication type:

Article

Mechanism of DNA flexibility enhancement by HMGB proteins.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1107, doi. 10.1093/nar/gkn1011

By:

Zhang, Jingyun;
McCauley, Micah J.;
Maher, L. James;
Williams, Mark C.;
Israeloff, N. E.

Publication type:

Article

Cellular versus viral microRNAs in host–virus interaction.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1035

By:

Ghosh, Zhumur;
Mallick, Bibekanand;
Chakrabarti, Jayprokas

Publication type:

Article