Works matching DE "GENE expression"

Results: 5000

Functional mechanism and clinical implications of lncRNA NEAT1 in traumatic fractures and their correlation with delayed healing.

Published in:

Journal of Orthopaedic Surgery & Research, 2025, v. 20, n. 1, p. 1, doi. 10.1186/s13018-025-06152-w

By:

Meng, Hua;
Chen, Zhaoyu;
Han, Meng;
Cheng, Qianqian;
Shang, Yanqi;
Wang, Hongqing;
Lu, Shenyi

Publication type:

Article

Moxibustion Improves Mitochondrial Energy Metabolism in Rats with Chronic Heart Failure via AMPK/PGC-1α Pathway Activation.

Published in:

Acupuncture & Electro-Therapeutics Research, 2025, v. 49, n. 3, p. 103, doi. 10.1177/03601293251346488

By:

Li, Qingling;
Pan, Liu;
Xia, Ran;
Gao, Bing;
Jia, Xuezhao;
Ma, Qiang;
Wang, Jing

Publication type:

Article

The Prognostic Significance of Ki-67 Expression in Breast Cancers Developing Malignant Effusions.

Published in:

Acta Cytologica, 2025, v. 69, n. 4, p. 352, doi. 10.1159/000546180

By:

Nikas, Ilias P.;
Yang, So Hyeon;
Lim, Sojung;
Lee, Hyebin;
Ryu, Han Suk

Publication type:

Article

Systematic identification, evolution and expression analyses of Brachypodium distachyon NHX gene family in response to salinity.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-025-10913-5

By:

Boubakri, Hatem;
Messaoudi, Siwar;
Gandour, Mhemmed

Publication type:

Article

Transcriptomic profiling of canine mammarygland tumors reveals subtype-specific and shared differentially expressed mRNAs.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-025-10881-w

By:

Wang, Shaohsu;
Nozaki, Nobuhiro;
Hasan, Nazmul;
Arif, Mohammad;
Guil-Luna, Silvia;
Yamato, Osamu;
Miura, Naoki

Publication type:

Article

Co-expression of SfGPX and SfGST in Nicotiana benthamiana and two Spiraea species further regulates their low-temperature tolerance mechanism.

Published in:

Tree Physiology, 2025, v. 45, n. 7, p. 1, doi. 10.1093/treephys/tpaf069

By:

Qian, Feng;
Lu, Bingbing;
Sun, Hao;
Zhang, Hui;
Cheng, Ziyin;
Jin, Zili;
Xu, Feifan;
Liu, Huimin

Publication type:

Article

PbHDZ35, an HD-ZIP transcription factor, regulates the trade-off between growth and drought stress in Phoebe bournei.

Published in:

Tree Physiology, 2025, v. 45, n. 7, p. 1, doi. 10.1093/treephys/tpaf068

By:

Liu, Yan;
Li, Xiao;
Ni, Mingyang;
Zhang, Yuting;
Ma, Wenjun;
Song, Yandong;
Tong, Zaikang;
Zhang, Junhong

Publication type:

Article

Gene expression regulation of the effect of shading on chlorophyll content in Fuding white tea (Camellia sinensis L.).

Published in:

Tree Physiology, 2025, v. 45, n. 7, p. 1, doi. 10.1093/treephys/tpae049

By:

Li, Guangzheng;
Chen, Xi;
Zhao, Yichen;
Zhao, Degang

Publication type:

Article

Genome‑wide identification of the MCU gene family and expression analysis during Ralstonia solanacearum infection in Nicotiana tabacum L.

Published in:

Plant Biotechnology Reports, 2025, v. 19, n. 4, p. 399, doi. 10.1007/s11816-025-00985-x

By:

Deng, Lele;
Sun, Yangyang;
Wang, Zhaoyi;
Yang, Wenwu;
Gao, Qiao;
Geng, Ruimei;
Xiao, Zhiliang;
Shai, Yanju;
Xiang, Haiying;
Yang, Aiguo;
Chen, Zhiqiang;
Li, Xuemei;
Liu, Zhengwen;
Ren, Min

Publication type:

Article

PEANUT: Pathway Enrichment Analysis through Network UTilization Open Access.

Published in:

Bioinformatics, 2025, v. 41, n. 7, p. 1, doi. 10.1093/bioinformatics/btaf410

By:

Berliner, Yair Pickholz;
Sharan, Roded

Publication type:

Article

shinyDSP: a Shiny application for interactive analysis and visualization of NanoString GeoMx Whole Transcriptome Atlas data Open Access.

Published in:

Bioinformatics, 2025, v. 41, n. 7, p. 1, doi. 10.1093/bioinformatics/btaf401

By:

Kim, Seung J;
Cecchini, Matthew J;
Mura, Marco

Publication type:

Article

HECLIP: histology-enhanced contrastive learning for imputation of transcriptomics profiles Open Access.

Published in:

Bioinformatics, 2025, v. 41, n. 7, p. 1, doi. 10.1093/bioinformatics/btaf363

By:

Wang, Qing;
Chen, Wen-jie;
Su, Jing;
Wang, Guangyu;
Song, Qianqian

Publication type:

Article

DOSE-L1000-Viz: an interactive Shiny application for dose–response transcriptomic analysis, target-centric exploration, and signature search Open Access.

Published in:

Bioinformatics, 2025, v. 41, n. 7, p. 1, doi. 10.1093/bioinformatics/btaf353

By:

Wang, Junmin

Publication type:

Article

Transcriptomic and functional analysis of triphenyl phosphate exposure in prostate cancer progression.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-03325-1

By:

Cai, Li;
Du, Guizhi

Publication type:

Article

PCED1A serves as a potential biomarker for diagnosis and prognosis in colorectal cancer.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-03311-7

By:

Wang, Chun;
Zhang, Dahong;
Huang, Yushen

Publication type:

Article

Uncovering the Interplay of Ferroptosis and Immune System in Coronary Artery Disease: Construction and Validation of a Diagnostic Model.

Published in:

International Journal of General Medicine, 2025, v. 18, p. 3901, doi. 10.2147/IJGM.S527955

By:

Zhang, Zhiyong;
Zhu, Xiaoming;
Zhang, Tao;
Li, Chuang;
Zhang, Dapeng;
Li, Weiming;
Zhao, Lin

Publication type:

Article

RNA Binding Motif Protein 15 (RBM15): Structure, Function and Its Research Progress in Tumors.

Published in:

International Journal of General Medicine, 2025, v. 18, p. 3635, doi. 10.2147/IJGM.S519741

By:

Long, Xiangyu;
Hu, Bintao;
Zhu, Shiqing;
Wu, Yue;
Wang, Tao

Publication type:

Article

Identification of Ferroptosis-Related Genes in Patients with Renal Ischemia-Reperfusion Injury.

Published in:

International Journal of General Medicine, 2025, v. 18, p. 3969, doi. 10.2147/IJGM.S522363

By:

Jiang, Guangwei;
Li, Jikuan;
Dong, Ruoyu;
Chen, Yuyan;
Zhang, Xiaoyu;
Shi, Xiaoming

Publication type:

Article

Identification of reactive CpGs and RNA expression in early COVID-19 through cis-eQTM analysis reflecting disease severity and recovery.

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08609-4

By:

Ryu, Hyojung;
An, Kyungwhan;
Kwon, Yoonsung;
Jeon, Yeonsu;
Jeon, Sungwon;
Choi, Hansol;
Kim, Yeo Jin;
Kim, Sunhwa;
Sul, Ok Joo;
Lee, SangJoon;
Chun, Asaph Young;
Shin, Eun-Seok;
Ra, Seung Won;
Bhak, Jong

Publication type:

Article

慢性盐胁迫对淡水石首鱼幼鱼抗氧化及脂代谢的影响.

Published in:

Journal of Nanjing Agricultural University / Nanjuing Nongye Daxue Xuebao, 2025, v. 48, n. 4, p. 929, doi. 10.7685/jnau.202403056

By:

田雨;
马学艳;
高凯利;
金武;
陈琬雯;
闻海波

Publication type:

Article

豌豆 PsRALF33 基因对镉胁迫的响应及功能研究.

Published in:

Journal of Nanjing Agricultural University / Nanjuing Nongye Daxue Xuebao, 2025, v. 48, n. 4, p. 870, doi. 10.7685/jnau.202403026

By:

黄丽萍;
徐西旺;
刘玥;
付文煊

Publication type:

Article

Identification and validation of hub genes related to neutrophil extracellular traps-mediated cell damage and immune recruitment during abdominal aortic aneurysm.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-14781-8

By:

Lu, Chuanlong;
Wang, Heng;
Qiao, Maolin;
Chang, Runze;
Chen, Jinshan;
Li, Lizheng;
Fan, Keyi;
Yan, Sheng;
Zhang, Ruijing;
Dong, Honglin

Publication type:

Article

Identification of STAT3 and BIRC5 as anoikis-related biomarkers in psoriasis.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-13992-3

By:

Bai, Wanting;
Wang, Kunqin;
Wu, Shaobo;
Zhou, Xiaolin;
Liu, Luyu;
Liu, Meng;
Chen, Caifeng

Publication type:

Article

Identification and experimental validation of mitochondrial and endoplasmic reticulum stress related gene in diabetic nephropathy.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-11097-5

By:

Li, Ting;
Li, Li;
Sun, Zijuan;
Zeng, Huijuan;
He, Guoyong;
Tian, Zhong;
Chen, Dong;
Li, Jun

Publication type:

Article

Mechanisms driving functional divergence of transcription factor paralogs.

Published in:

New Phytologist, 2025, v. 247, n. 5, p. 2022, doi. 10.1111/nph.70309

By:

Higgins, Isabella J.;
Choudury, Sarah G.;
Husbands, Aman Y.

Publication type:

Article

Measuring natural selection on the transcriptome.

Published in:

New Phytologist, 2025, v. 247, n. 5, p. 1994, doi. 10.1111/nph.70287

By:

Stinchcombe, John R.;
Kelly, John K.

Publication type:

Article

Strike at the root: exploring the transferability of heat stress tolerance in tomatoes by reciprocal grafting.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1549737

By:

Biermann, Robin T.;
Bach, Linh T.;
Steuer, Christian M.;
Reimer, Julia J.;
Schwarz, Dietmar;
Börnke, Frederik

Publication type:

Article

The bidirectional regulatory network between ATF4 and lncRNAs in systemic diseases.

Published in:

Frontiers in Oncology, 2025, p. 1, doi. 10.3389/fonc.2025.1562861

By:

Wu, Dongdong;
Huang, Mei;
Ma, Changning;
Xu, Xuetong;
Wu, Tianhui;
Zhang, Miao

Publication type:

Article

CREB regulates Foxp3+ST-2+ TREGS with enhanced IL-10 production.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1601008

By:

Hebbar Subramanyam, Sudheendra;
Turyne Hriczko, Judit;
Schulz, Saskia;
Look, Thomas;
Goodarzi, Tannaz;
Clarner, Tim;
Scheld, Miriam;
Kipp, Markus;
Verjans, Eva;
Böll, Svenja;
Neullens, Christopher;
Costa, Ivan;
Li, Zhijian;
Gan, Lin;
Denecke, Bernd;
Schippers, Angela;
Floess, Stefan;
Huehn, Jochen;
Schmitt, Edgar;
Bopp, Tobias

Publication type:

Article

Genome-wide identification of GATA family genes in sweet potato (Ipomoea batatas L.) and their expression patterns under abiotic stress.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1635749

By:

Wang, Chong;
Lan, Mengjiao;
Xiao, Manqiu;
Peng, Ying;
Pan, Hao;
Deng, Jiaqi;
Wu, Wensheng

Publication type:

Article

Synergistic effects of antibiotics and efflux pump inhibitors on multidrug-resistant Escherichia coli and Klebsiella pneumoniae.

Published in:

Journal of Applied Microbiology, 2025, v. 136, n. 7, p. 1, doi. 10.1093/jambio/lxaf169

By:

Devi, Barani Thillai;
Aditya, Vankadari;
Kini, Sudarshan;
Kumar, Ballamoole Krishna;
Deekshit, Vijaya Kumar

Publication type:

Article

Selection procedure for entomopathogenic fungi using molecular markers.

Published in:

Journal of Applied Microbiology, 2025, v. 136, n. 7, p. 1, doi. 10.1093/jambio/lxaf139

By:

Ni, Nian-Tong;
Pudasaini, Rameshwor;
Krutmuang, Patcharin;
Nai, Yu-Shin

Publication type:

Article

CircCDYL Contributes to Apoptosis, Ferroptosis, and Oxidative Stress of Ang II-Induced Vascular Smooth Muscle Cells in Thoracic Aortic Aneurysm.

Published in:

Angiology, 2025, v. 76, n. 7, p. 637, doi. 10.1177/00033197241234075

By:

Fu, Changjiang;
Zuo, Xiangrong;
An, Jinghui;
Zhang, Yanlong;
Guo, Lixin;
Li, Huashun

Publication type:

Article

Integrative multiomics analysis reveals the subtypes and key mechanisms of platinum resistance in gastric cancer: identification of KLF9 as a promising therapeutic target.

Published in:

Journal of Translational Medicine, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12967-025-06725-7

By:

Zhang, Pengcheng;
Wang, Lexin;
Lin, Haonan;
Han, Yihui;
Zhou, Jingfang;
Song, Hang;
Wang, Peng;
Tan, Huanhuan;
Fu, Yajuan

Publication type:

Article

Characterization of a pathogenic gain-of-function mutation in the N-terminal domain of STAT1 which is reported to be associated with eosinophilic esophagitis.

Published in:

Cell Communication & Signaling, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12964-025-02330-9

By:

Annawald, Kristin;
Gregus, Anke;
Wirths, Oliver;
Meyer, Thomas

Publication type:

Article

Effect of multi-walled carbon nanotube exposure on the expression pattern of genes involved in silymarin synthesis pathway in Silybum Marianum L.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-07114-4

By:

Asakereh, Forough;
Etminan, Alireza;
Azizinezhad, Reza;
Ghorbanpour, Mansour;
Pour-Aboughadareh, Alireza

Publication type:

Article

Transcriptional patterns of cancer-related genes in primary and metastatic tumours revealed by machine learning.

Published in:

BMC Biology, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12915-025-02339-z

By:

Keshavarz-Rahaghi, Faeze;
Pleasance, Erin;
Jones, Steven J. M.

Publication type:

Article

Machine learning on multiple epigenetic features reveals H3K27Ac as a driver of gene expression prediction across patients with glioblastoma.

Published in:

PLoS Computational Biology, 2025, v. 21, n. 8, p. 1, doi. 10.1371/journal.pcbi.1012272

By:

Suita, Yusuke;
Bright Jr, Hardy;
Pu, Yuan;
Toruner, Merih Deniz;
Idehen, Jordan;
Tapinos, Nikos;
Singh, Ritambhara

Publication type:

Article

Comparison Anticancer Effects of Platinum Ribavirin with Platinum Azidothymidine via Telomerase, Bcl-2, miRNA-21 and miRNA-122 Biomarkers Genes Expression on HepG2 Cancer Cell Lines.

Published in:

Middle East Journal of Cancer, 2025, v. 16, n. 3, p. 197, doi. 10.30476/mejc.2025.104451.2183

By:

Sabokrouh, Abdolreza;
Ghaffari, Nasim;
Hajivand, Soheila;
Atabi, Fereshteh;
Saghiri, Reza;
Sharifi, Zohreh

Publication type:

Article

Urothelial Carcinoma Stage and Grade Association with the Expression Levels of Eukaryotic Initiation Factor 4E and 4E Binding Protein 1.

Published in:

Middle East Journal of Cancer, 2025, v. 16, n. 3, p. 267, doi. 10.30476/mejc.2024.102811.2110

By:

Naji, Mohammad;
Yaghobinejad, Mahsa;
Mirzaei, Sepideh;
Angaji, Seyed Abdolhamid;
Saber, Hajar;
Parvin, Mahmoud;
Sharifiaghdas, Farzaneh

Publication type:

Article

Flaxseed Extract Can Modulates Apoptotic Genes to Promote Cell Death in Breast Cancer Cells.

Published in:

Middle East Journal of Cancer, 2025, v. 16, n. 3, p. 258, doi. 10.30476/mejc.2024.102754.2108

By:

Mehrjardi, Ehsan Zare;
Montazerolhojeh, Shadi;
Tezerjani, Masoud Dehghan;
Dehshiri, Safieh;
Ashkezari, Mahmood Dehghani;
Seifati, Seyed Morteza

Publication type:

Article

Evaluation of Potential miR-221, miR-93, miR-21, and miR-24 as Molecular Markers for Laryngeal Squamous Cell Carcinoma.

Published in:

Middle East Journal of Cancer, 2025, v. 16, n. 3, p. 249, doi. 10.30476/mejc.2024.102700.2105

By:

Azimi, Habib;
Zarredar, Habib;
Asadi, Milad;
Zafari, Venus;
Shanehbandi, Dariush;
Jadid, Hamed Sabbagh;
Ghasembaglou, Shahram

Publication type:

Article

Prevalence and Clinicopathologic Features of HER2 Overexpression in Endocervical Adenocarcinoma.

Published in:

Middle East Journal of Cancer, 2025, v. 16, n. 3, p. 238, doi. 10.30476/mejc.2024.102620.2099

By:

Momeni, Niusha;
Nili, Fatemeh;
Ameli, Fereshteh;
Sarmadi, Soheila;
Mirzaian, Elham;
Moravej-Salehi, Farnaz;
Zamani, Narges

Publication type:

Article

Nettle (Urtica Dioica L.) Modulates Angiogenesis by Targeting the PI3K/AKT/eNOS Pathway in Prostate Cancer.

Published in:

Middle East Journal of Cancer, 2025, v. 16, n. 3, p. 228, doi. 10.30476/mejc.2024.102467.2086

By:

AL-Attabi, Abduladheem;
Mohammed, Mohammed Sabah;
AL-Khazali, Noor Ali Yazi;
Alkubaisy, Sami Awad;
Merza, Muna S.;
Abdulhadi, Mohanad Ali;
Mustafa, Yasser Fakri

Publication type:

Article

The effects of S-metolachlor on some fatty acids and fatty acids gene expressions in safflower (Carthamus tinctorius L.).

Published in:

Turkish Journal of Botany, 2025, v. 49, n. 4, p. 304, doi. 10.55730/1300-008X.2864

By:

NARDEMİR, Gizem;
AĞAR, Güleray;
TAŞPINAR, Mahmut Sinan

Publication type:

Article

MicroRNA biomarkers for predicting neurological outcomes in traumatic brain injury patients.

Published in:

Archives of Trauma Research, 2024, v. 13, n. 2, p. 132, doi. 10.48307/ATR.2024.186838

By:

Miri, MirMohammad;
Hosseiniara, Reza

Publication type:

Article

Evaluating the antibacterial effect of Dermatocarpon miniatum on Methicillin-resistant Staphylococcus aureus retrieved from burn wound.

Published in:

Archives of Trauma Research, 2024, v. 13, n. 2, p. 105, doi. 10.48307/ATR.2024.423733.1050

By:

Rashki, Somaye;
Marzhoseyni, Zeynab;
Razmjoue, Damoun;
Khaledi, Azad

Publication type:

Article

Compromised PGF2α signaling in the paraventricular hypothalamic nucleus contributes to the central sensitization of the nitroglycerin-induced chronic migraine in male mice.

Published in:

Journal of Headache & Pain, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s10194-025-02124-x

By:

Hu, Xianrong;
Wu, Lunquan;
Wang, Li;
Peng, Congxue;
Tian, Yunyun;
Zhu, Qian;
Zhu, Hongwei;
Nie, Liang;
Yin, Li;
Zhang, Yuehui;
Bian, Jiang

Publication type:

Article

Identification of copper related biomarkers in breast cancer using machine learning.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-03340-2

By:

Wang, Jing;
Wang, Haining;
Li, Zilan;
Xu, Qi;
Yang, Yiwei;
Shi, Run;
Liu, Feng;
Jin, Shiyang

Publication type:

Article

Transcriptome and Physiological Analyses Unravel Chromium Stress Tolerance Mechanism in Brassica napus L.

Published in:

Journal of Plant Growth Regulation, 2025, v. 44, n. 7, p. 4022, doi. 10.1007/s00344-025-11670-2

By:

Batool, Iram;
Ayyaz, Ahsan;
Zhang, Kangni;
Hannan, Fakhir;
Sun, Yongqi;
Qin, Tongjun;
Athar, Habib Ur Rehman;
Naeem, Muhammad Shahbaz;
Farooq, Muhammad Ahsan;
Zhou, Weijun

Publication type:

Article