Works matching AU Arick, Mark A.

Results: 38

Maternal melatonin supplementation alters the transcriptomic profile of placenta in nutrient restricted cattle.

Published in:

2025

By:

Rajput, Shiveeli;
ContrerasCorrea, Zully;
Lemley, Caleb O.;
Daous, Hala E. l.;
Sidelinger, Darcie R.;
King, Heath H.;
Arick, Mark A.;
Littlejohn, Brittni P.

Publication type:

Abstract

Integrated fetal testicular transcriptomic and epigenomic profiles during maternal nutrient restriction with dietary melatonin intervention.

Published in:

2025

By:

El Daous, Hala;
Contreras-Correa, Zully;
Lemley, Caleb O.;
Rajput, Shiveeli;
Sidelinger, Darcie R.;
King, Heath H.;
Arick, Mark A.;
Littlejohn, Brittni P.

Publication type:

Abstract

Seminal plasma uterine priming alters uterine transcriptomics and negatively impacts embryo growth and uterine artery resistance but not offspring liver transcriptomics in beef cattle.

Published in:

Journal of Animal Science, 2024, v. 102, p. 1, doi. 10.1093/jas/skae300

By:

Swanson, Rebecca M;
Messman, Riley D;
Dobbins, Thomas W;
Contreras-Correa, Zully E;
Arick, Mark A;
Sidelinger, Darcie R;
King, Heath;
Lemley, Caleb O

Publication type:

Article

Examining Mammary Gland Transcriptomic Profiles Using Rna-Seq in Slick and Wild-Type Haired Holstein Cattle Under Tropical Conditions.

Published in:

Journal of Animal Science, 2023, v. 101, p. 552, doi. 10.1093/jas/skad281.648

By:

Contreras-Correa, Zully E.;
Arick, Mark A.;
Sánchez-Rodríguez, Héctor L.;
Lemley, Caleb O.

Publication type:

Article

The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1.

Published in:

Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0253-3

By:

Showmaker, Kurt C.;
Arick II, Mark A.;
Chuan-Yu Hsu;
Martin, Brigitte E.;
Xiaoqiang Wang;
Jiayuan Jia;
Wubben, Martin J.;
Nichols, Robert L.;
Allen, Tom W.;
Peterson, Daniel G.;
Shi-En Lu

Publication type:

Article

Male fathead minnow transcriptomes and associated chemical analytes in the Milwaukee estuary system.

Published in:

Scientific Data, 2022, v. 9, n. 1, p. 1, doi. 10.1038/s41597-022-01553-6

By:

Garcia-Reyero, Natàlia;
Arick II, Mark A.;
Woolard, E. Alice;
Wilbanks, Mitchell;
Mylroie, John E.;
Jensen, Kathleen;
Kahl, Michael;
Feifarek, David;
Poole, Shane;
Randolph, Eric;
Cavallin, Jenna;
Blackwell, Brett R.;
Villeneuve, Daniel;
Ankley, Gerald T.;
Perkins, Edward J.

Publication type:

Article

TALEN-Based HvMPK3 Knock-Out Attenuates Proteome and Root Hair Phenotypic Responses to flg22 in Barley.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. N.PAG, doi. 10.3389/fpls.2021.666229

By:

Takáč, Tomáš;
Křenek, Pavel;
Komis, George;
Vadovič, Pavol;
Ovečka, Miroslav;
Ohnoutková, Ludmila;
Pechan, Tibor;
Kašpárek, Petr;
Tichá, Tereza;
Basheer, Jasim;
Arick II, Mark;
Šamaj, Jozef

Publication type:

Article

Computational prediction of disease microRNAs in domestic animals.

Published in:

BMC Research Notes, 2014, v. 7, n. 1, p. 403, doi. 10.1186/1756-0500-7-403

By:

Buza, Teresia;
Arick II, Mark;
Hui Wang;
Peterson, Daniel G.

Publication type:

Article

The Genome Sequence of Gossypioides kirkii Illustrates a Descending Dysploidy in Plants.

Published in:

Frontiers in Plant Science, 2019, v. 10, p. 1, doi. 10.3389/fpls.2019.01541

By:

Udall, Joshua A.;
Long, Evan;
Ramaraj, Thiruvarangan;
Conover, Justin L.;
Yuan, Daojun;
Grover, Corrinne E.;
Gong, Lei;
Arick II, Mark A.;
Masonbrink, Rick E.;
Peterson, Daniel G.;
Wendel, Jonathan F.

Publication type:

Article

Transcriptomic Analysis of Listeria monocytogenes in Response to Bile Under Aerobic and Anaerobic Conditions.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.754748

By:

Chakravarty, Damayanti;
Sahukhal, Gyan;
Arick II, Mark;
Davis, Morgan L.;
Donaldson, Janet R.

Publication type:

Article

Genomic diversity and evolution of the Hawaiian Islands endemic Kokia (Malvaceae).

Published in:

G3: Genes | Genomes | Genetics, 2024, v. 14, n. 10, p. 1, doi. 10.1093/g3journal/jkae180

By:

Kayal, Ehsan;
Arick, Mark A;
Hsu, Chuan-yu;
Thrash, Adam;
Yorkston, Mitsuko;
Morden, Clifford W;
Wendel, Jonathan F;
Peterson, Daniel G;
Grover, Corrinne E

Publication type:

Article

Nematode-resistance loci in upland cotton genomes are associated with structural differences.

Published in:

G3: Genes | Genomes | Genetics, 2024, v. 14, n. 9, p. 1, doi. 10.1093/g3journal/jkae140

By:

Cohen, Zachary P;
Perkin, Lindsey C;
Wagner, Tanya A;
Liu, Jinggao;
Bell, Alois A;
Arick, Mark A;
Grover, Corrinne E;
Yu, John Z;
Udall, Joshua A;
Suh, Charles P C

Publication type:

Article

A high-quality chromosome-level genome assembly of rohu carp, Labeo rohita, and its utilization in SNP-based exploration of gene flow and sex determination.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 3, p. 1, doi. 10.1093/g3journal/jkad009

By:

Arick II, Mark A.;
Grover, Corrinne E.;
Chuan-Yu Hsu;
Magbanua, Zenaida;
Pechanova, Olga;
Miller, Emma R.;
Thrash, Adam;
Youngblood, Ramey C.;
Ezzell, Lauren;
Alam, Md Samsul;
Benzie, John A. H.;
Hamilton, Matthew G.;
Karsi, Attila;
Lawrence, Mark L.;
Peterson, Daniel G.

Publication type:

Article

The Gossypium herbaceum L. Wagad genome as a resource for understanding cotton domestication.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 2, p. 1, doi. 10.1093/g3journal/jkac308

By:

Ramaraj, Thiruvarangan;
Grover, Corrinne E.;
Mendoza, Azalea C.;
Arick II, Mark A.;
Jareczek, Josef J.;
Leach, Alexis G.;
Peterson, Daniel G.;
Wendel, Jonathan F.;
Udall, Joshua A.

Publication type:

Article

The Gossypium anomalum genome as a resource for cotton improvement and evolutionary analysis of hybrid incompatibility.

Published in:

G3: Genes | Genomes | Genetics, 2021, v. 11, n. 11, p. 1, doi. 10.1093/g3journal/jkab319

By:

Grover, Corrinne E.;
Daojun Yuan;
Arick II, Mark A.;
Miller, Emma R.;
Guanjing Hu;
Peterson, Daniel G.;
Wendel, Jonathan F.;
Udall, Joshua A.

Publication type:

Article

Genome assembly of two nematode-resistant cotton lines (Gossypium hirsutum L.).

Published in:

G3: Genes | Genomes | Genetics, 2021, v. 11, n. 11, p. 1, doi. 10.1093/g3journal/jkab276

By:

Perkin, Lindsey C.;
Bell, Al;
Hinze, Lori L.;
Suh, Charles P.-C.;
Arick II, Mark A.;
Peterson, Daniel G.;
Udall, Joshua A.

Publication type:

Article

The Gossypium stocksii genome as a novel resource for cotton improvement.

Published in:

G3: Genes | Genomes | Genetics, 2021, v. 11, n. 7, p. 1, doi. 10.1093/g3journal/jkab125

By:

Grover, Corrinne E.;
Daojun Yuan;
Arick II, Mark A.;
Miller, Emma R.;
QGuanjing Hu;
Peterson, Daniel G.;
Wendel, Jonathan F.;
Udall, Joshua A.

Publication type:

Article

The Gossypium longicalyx Genome as a Resource for Cotton Breeding and Evolution.

Published in:

G3: Genes | Genomes | Genetics, 2020, v. 10, n. 5, p. 1457, doi. 10.1534/g3.120.401050

By:

Grover, Corrinne E.;
Mengqiao Pan;
Daojun Yuan;
Arick, Mark A.;
Guanjing Hu;
Brase, Logan;
Stelly, David M.;
Zefu Lu;
Schmitz, Robert J.;
Peterson, Daniel G.;
Wendel, Jonathan F.;
Udall, Joshua A.

Publication type:

Article

De Novo Genome Sequence Assemblies of Gossypium raimondii and Gossypium turneri.

Published in:

G3: Genes | Genomes | Genetics, 2019, v. 9, n. 10, p. 3079, doi. 10.1534/g3.119.400392

By:

Udall, Joshua A.;
Long, Evan;
Hanson, Chris;
Yuan, Daojun;
Ramaraj, Thiruvarangan;
Conover, Justin L.;
Gong, Lei;
Arick, Mark A.;
Grover, Corrinne E.;
Peterson, Daniel G.;
Wendel, Jonathan F.

Publication type:

Article

Domestication over Speciation in Allopolyploid Cotton Species: A Stronger Transcriptomic Pull.

Published in:

Genes, 2023, v. 14, n. 6, p. 1301, doi. 10.3390/genes14061301

By:

Jareczek, Josef J.;
Grover, Corrinne E.;
Hu, Guanjing;
Xiong, Xianpeng;
Arick II, Mark A.;
Peterson, Daniel G.;
Wendel, Jonathan F.

Publication type:

Article

Dual Domestication, Diversity, and Differential Introgression in Old World Cotton Diploids.

Published in:

Genome Biology & Evolution, 2022, v. 14, n. 12, p. 1, doi. 10.1093/gbe/evac170

By:

Grover, Corrinne E;
Arick, Mark A;
Thrash, Adam;
Sharbrough, Joel;
Hu, Guanjing;
Yuan, Daojun;
Snodgrass, Samantha;
Miller, Emma R;
Ramaraj, Thiruvarangan;
Peterson, Daniel G;
Udall, Joshua A;
Wendel, Jonathan F

Publication type:

Article

Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing.

Published in:

Genome Biology & Evolution, 2019, v. 11, n. 1, p. 53, doi. 10.1093/gbe/evy256

By:

Grover, Corrinne E;
Arick, Mark A;
Thrash, Adam;
Conover, Justin L;
Sanders, William S;
Peterson, Daniel G;
Frelichowski, James E;
Scheffler, Jodi A;
Scheffler, Brian E;
Wendel, Jonathan F

Publication type:

Article

Comparative Genomics of an Unusual Biogeographic Disjunction in the Cotton Tribe (Gossypieae) Yields Insights into Genome Downsizing.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 12, p. 3328, doi. 10.1093/gbe/evx248

By:

Grover, Corrinne E.;
Arick II, Mark A.;
Conover, Justin L.;
Thrash, Adam;
Guanjing Hu;
Sanders, William S.;
Chuan-Yu Hsu;
Naqvi, Rubab Zahra;
Farooq, Muhammad;
Xiaochong Li;
Lei Gong;
Mudge, Joann;
Ramaraj, Thiruvarangan;
Udall, Joshua A.;
Peterson, Daniel G.;
Wendel, Jonathan F.

Publication type:

Article

Independent Domestication of Two Old World Cotton Species.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 6, p. 1940, doi. 10.1093/gbe/evw129

By:

Renny-Byfield, Simon;
Page, Justin T.;
Udall, Joshua A.;
Sanders, William S.;
Peterson, Daniel G.;
Arick II, Mark A.;
Grover, Corrinne E.;
Wendel, Jonathan F.

Publication type:

Article

Keanu: a novel visualization tool to explore biodiversity in metagenomes.

Published in:

BMC Bioinformatics, 2019, v. 20, p. 1, doi. 10.1186/s12859-019-2629-4

By:

Thrash, Adam;
Arick II, Mark;
Barbato, Robyn A.;
Jones, Robert M.;
Douglas, Thomas A.;
Esdale, Julie;
Perkins, Edward J.;
Garcia-Reyero, Natàlia

Publication type:

Article

Identification of Protein Biomarkers for Differentiating Listeria monocytogenes Genetic Lineage III.

Published in:

Foods, 2024, v. 13, n. 9, p. 1302, doi. 10.3390/foods13091302

By:

Gomaa, Basant;
Lu, Jingjun;
Abdelhamed, Hossam;
Banes, Michelle;
Pechanova, Olga;
Pechan, Tibor;
Arick II, Mark A.;
Karsi, Attila;
Lawrence, Mark L.

Publication type:

Article

Homoeologous gene expression and co-expression network analyses and evolutionary inference in allopolyploids.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 2, p. 1819, doi. 10.1093/bib/bbaa035

By:

Hu, Guanjing;
Grover, Corrinne E;
Arick, Mark A;
Liu, Meiling;
Peterson, Daniel G;
Wendel, Jonathan F

Publication type:

Article

Transcriptome analysis of the 2,4-dichlorophenoxyacetic acid (2,4-D)-tolerant cotton chromosome substitution line CS-B15sh and its susceptible parental lines G. hirsutum L. cv. Texas Marker-1 and G. barbadense L. cv. Pima 379.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.910369

By:

Perez, Loida M.;
Mauleon, Ramil;
Arick II, Mark A.;
Magbanua, Zenaida V.;
Peterson, Daniel G.;
Dean, Jeffrey F. D.;
Te Ming Tseng

Publication type:

Article

Publisher Correction: Therapeutic potential of N-acetylcysteine in acrylamide acute neurotoxicity in adult zebrafish.

Published in:

2020

By:

Faria, Melissa;
Prats, Eva;
Gómez-Canela, Cristian;
Hsu, Chuan-Yu;
Arick, Mark A.;
Bedrossiantz, Juliette;
Orozco, Manuel;
Garcia-Reyero, Natàlia;
Ziv, Tamar;
Ben-Lulu, Shani;
Admon, Arie;
Gómez-Oliván, Leobardo Manuel;
Raldúa, Demetrio

Publication type:

Correction Notice

Targeting redox metabolism: the perfect storm induced by acrylamide poisoning in the brain.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-019-57142-y

By:

Raldúa, Demetrio;
Casado, Marta;
Prats, Eva;
Faria, Melissa;
Puig-Castellví, Francesc;
Pérez, Yolanda;
Alfonso, Ignacio;
Hsu, Chuan-Yu;
Arick II, Mark A.;
Garcia-Reyero, Natàlia;
Ziv, Tamar;
Ben-Lulu, Shani;
Admon, Arie;
Piña, Benjamin

Publication type:

Article

Therapeutic potential of N-acetylcysteine in acrylamide acute neurotoxicity in adult zebrafish.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-53154-w

By:

Faria, Melissa;
Prats, Eva;
Gómez-Canela, Cristian;
Hsu, Chuan-Yu;
Arick, Mark A.;
Bedrossiantz, Juliette;
Orozco, Manuel;
Garcia-Reyero, Natàlia;
Ziv, Tamar;
Ben-Lulu, Shani;
Admon, Arie;
Gómez-Oliván, Leobardo Manuel;
Raldúa, Demetrio

Publication type:

Article

Identification of Antimicrobial Resistance Determinants in Aeromonas veronii Strain MS-17-88 Recovered From Channel Catfish (Ictalurus punctatus).

Published in:

Frontiers in Cellular & Infection Microbiology, 2020, v. 10, p. 1, doi. 10.3389/fcimb.2020.00348

By:

Tekedar, Hasan C.;
Arick II, Mark A.;
Hsu, Chuan-Yu;
Thrash, Adam;
Blom, Jochen;
Lawrence, Mark L.;
Abdelhamed, Hossam

Publication type:

Article

Assessment of the genetic diversity of Atlantic bottlenose dolphin (Tursiops truncatus) strandings in the Mississippi Sound (USA).

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0314249

By:

Arick II, Mark A.;
Landrau-Giovannetti, Nelmarie;
Hsu, Chuan-Yu;
Grover, Corrinne E.;
Reichley, Stephen;
Magbanua, Zenaida V.;
Pechanova, Olga;
Moore, Debra;
Kayal, Ehsan;
Linhoss, Anna;
Madrigal, Theresa;
Peterman, Mark;
Ozdemir, Ozan;
Peterson, Daniel G.;
Solangi, Moby;
Peterman, Beth;
Lawrence, Mark;
Karsi, Attila

Publication type:

Article

Transcriptomic dissection of the rice – Burkholderia glumae interaction.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 755, doi. 10.1186/1471-2164-15-755

By:

Magbanua, Zenaida V;
Arick II, Mark;
Buza, Teresia;
Chuan-Yu Hsu;
Showmaker, Kurt C;
Chouvarine, Philippe;
Peng Deng;
Peterson, Daniel G;
Shien Lu

Publication type:

Article

Multiomic Analysis of Zebrafish Models of Acute Organophosphorus Poisoning With Different Severity.

Published in:

Toxicological Sciences, 2019, v. 171, n. 1, p. 211, doi. 10.1093/toxsci/kfz133

By:

Piña, Benjamin;
Ziv, Tamar;
Faria, Melissa;
Ben-Lulu, Shani;
Prats, Eva;
II, Mark A Arick;
Gómez-Canela, Cristian;
García-Reyero, Natàlia;
Admon, Arie;
Raldúa, Demetrio

Publication type:

Article

Variation in cytonuclear expression accommodation among allopolyploid plants.

Published in:

Genetics, 2022, v. 222, n. 2, p. 1, doi. 10.1093/genetics/iyac118

By:

Grover, Corrinne E.;
Forsythe, Evan S.;
Sharbrough, Joel;
Miller, Emma R.;
Conover, Justin L.;
DeTar, Rachael A.;
Chavarro, Carolina;
Arick, Mark A.;
Peterson, Daniel G.;
Leal-Bertioli, Soraya C. M.;
Sloan, Daniel B.;
Wendel, Jonathan F.

Publication type:

Article

A high-resolution model of gene expression during Gossypium hirsutum (cotton) fiber development.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11360-z

By:

Grover, Corrinne E.;
Jareczek, Josef J.;
Swaminathan, Sivakumar;
Lee, Youngwoo;
Howell, Alexander H.;
Rani, Heena;
Arick II, Mark A.;
Leach, Alexis G.;
Miller, Emma R.;
Yang, Pengcheng;
Hu, Guanjing;
Xiong, Xianpeng;
Mallery, Eileen L.;
Peterson, Daniel G.;
Xie, Jun;
Haigler, Candace H.;
Zabotina, Olga A.;
Szymanski, Daniel B.;
Wendel, Jonathan F.

Publication type:

Article

Comparative transcriptomic and phenotypic analysis of monoclonal and polyclonal Populus deltoides genotypes.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2024.1498535

By:

Gosselaar, Macy;
Arick II, Mark A.;
Hsu, Chuan-Yu;
Renninger, Heidi;
Siegert, Courtney M.;
Shafqat, Waqar;
Peterson, Daniel G.;
Himes, Austin

Publication type:

Article