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- Title
Presenting and exploring biological pathways with PathVisio.
- Authors
van Iersel, Martijn P; Kelder, Thomas; Pico, Alexander R; Hanspers, Kristina; Coort, Susan; Conklin, Bruce R; Evelo, Chris
- Abstract
Biological pathways are a useful abstraction of biological concepts, and software tools to deal with pathway diagrams can help biological research. PathVisio is a new visualization tool for biological pathways that mimics the popular GenMAPP tool with a completely new Java implementation that allows better integration with other open source projects. The GenMAPP MAPP file format is replaced by GPML, a new XML file format that provides seamless exchange of graphical pathway information among multiple programs.
- Publication
BMC bioinformatics, 2008, Vol 9, p399
- ISSN
1471-2105
- Publication type
Journal Article
- DOI
10.1186/1471-2105-9-399