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- Title
Génolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes.
- Authors
Sherman, David J; Martin, Tiphaine; Nikolski, Macha; Cayla, Cyril; Souciet, Jean-Luc; Durrens, Pascal; Génolevures Consortium
- Abstract
The Génolevures online database (http://cbi.labri.fr/Genolevures/ and http://genolevures.org/) provides exploratory tools and curated data sets relative to nine complete and seven partial genome sequences determined and manually annotated by the Génolevures Consortium, to facilitate comparative genomic studies of Hemiascomycete yeasts. The 2008 update to the Génolevures database provides four new genomes in complete (subtelomere to subtelomere) chromosome sequences, 50,000 protein-coding and tRNA genes, and in silico analyses for each gene element. A key element is a novel classification of conserved multi-species protein families and their use in detecting synteny, gene fusions and other aspects of genome remodeling in evolution. Our purpose is to release high-quality curated data from complete genomes, with a focus on the relations between genes, genomes and proteins.
- Publication
Nucleic acids research, 2009, Vol 37, Issue Database issue, pD550
- ISSN
1362-4962
- Publication type
Journal Article
- DOI
10.1093/nar/gkn859