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- Title
Ensembl 2007.
- Authors
Hubbard, T J P; Aken, B L; Beal, K; Ballester, B; Caccamo, M; Chen, Y; Clarke, L; Coates, G; Cunningham, F; Cutts, T; Down, T; Dyer, S C; Fitzgerald, S; Fernandez-Banet, J; Graf, S; Haider, S; Hammond, M; Herrero, J; Holland, R; Howe, K; Howe, K; Johnson, N; Kahari, A; Keefe, D; Kokocinski, F; Kulesha, E; Lawson, D; Longden, I; Melsopp, C; Megy, K; Meidl, P; Ouverdin, B; Parker, A; Prlic, A; Rice, S; Rios, D; Schuster, M; Sealy, I; Severin, J; Slater, G; Smedley, D; Spudich, G; Trevanion, S; Vilella, A; Vogel, J; White, S; Wood, M; Cox, T; Curwen, V; Durbin, R; Fernandez-Suarez, X M; Flicek, P; Kasprzyk, A; Proctor, G; Searle, S; Smith, J; Ureta-Vidal, A; Birney, E
- Abstract
The Ensembl (http://www.ensembl.org/) project provides a comprehensive and integrated source of annotation of chordate genome sequences. Over the past year the number of genomes available from Ensembl has increased from 15 to 33, with the addition of sites for the mammalian genomes of elephant, rabbit, armadillo, tenrec, platypus, pig, cat, bush baby, common shrew, microbat and european hedgehog; the fish genomes of stickleback and medaka and the second example of the genomes of the sea squirt (Ciona savignyi) and the mosquito (Aedes aegypti). Some of the major features added during the year include the first complete gene sets for genomes with low-sequence coverage, the introduction of new strain variation data and the introduction of new orthology/paralog annotations based on gene trees.
- Publication
Nucleic acids research, 2007, Vol 35, Issue Database issue, pD610
- ISSN
1362-4962
- Publication type
Journal Article
- DOI
10.1093/nar/gkl996