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- Title
TargetIdentifier: a webserver for identifying full-length cDNAs from EST sequences.
- Authors
Min, Xiang Jia; Butler, Gregory; Storms, Reginald; Tsang, Adrian
- Abstract
TargetIdentifier is a webserver that identifies full-length cDNA sequences from the expressed sequence tag (EST)-derived contig and singleton data. To accomplish this TargetIdentifier uses BLASTX alignments as a guide to locate protein coding regions and potential start and stop codons. This information is then used to determine whether the EST-derived sequences include their translation start codons. The algorithm also uses the BLASTX output to assign putative functions to the query sequences. The server is available at https://fungalgenome.concordia.ca/tools/TargetIdentifier.html.
- Publication
Nucleic acids research, 1, Vol 33, Issue Web Server issue, pW669
- ISSN
1362-4962
- Publication type
Journal Article
- DOI
10.1093/nar/gki436