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- Title
JDet: interactive calculation and visualization of function-related conservation patterns in multiple sequence alignments and structures.
- Authors
Muth, Thilo; García-Martín, Juan A; Rausell, Antonio; Juan, David; Valencia, Alfonso; Pazos, Florencio
- Abstract
We have implemented in a single package all the features required for extracting, visualizing and manipulating fully conserved positions as well as those with a family-dependent conservation pattern in multiple sequence alignments. The program allows, among other things, to run different methods for extracting these positions, combine the results and visualize them in protein 3D structures and sequence spaces.
- Publication
Bioinformatics (Oxford, England), 2012, Vol 28, Issue 4, p584
- ISSN
1367-4811
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/btr688