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- Title
CoCo: a web application to display, store and curate ChIP-on-chip data integrated with diverse types of gene expression data.
- Authors
Charles Girardot; Oleg Sklyar; Sophie Grosz; Wolfgang Huber; Eileen E. M. Furlong
- Abstract
Motivation: CoCo, ChIP-on-Chip online, is an open-source web application that supports the annotation and curation of regulatory regions and associated target genes discovered in ChIP-on-chip experiments. CoCo integrates ChIP-on-chip results with diverse types of gene expression data (expression profiling, in situ hybridization) and displays them within a genomic context. Regulatory relationships between the transcription factor-bound regions and putative target genes can be stored and expanded throughout different sessions.Availability:http://furlonglab.embl.de/methods/tools/cocoContact:charles.girardot@embl.de
- Publication
Bioinformatics, 2007, Vol 23, Issue 6, p771
- ISSN
1367-4803
- Publication type
Academic Journal
- DOI
10.1093/bioinformatics/btl641