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- Title
affylmGUI: a graphical user interface for linear modeling of single channel microarray data.
- Authors
Wettenhall, James M; Simpson, Ken M; Satterley, Keith; Smyth, Gordon K
- Abstract
affylmGUI is a graphical user interface (GUI) to an integrated workflow for Affymetrix microarray data. The user is able to proceed from raw data (CEL files) to QC and pre-processing, and eventually to analysis of differential expression using linear models with empirical Bayes smoothing. Output of the analysis (tables and figures) can be exported to an HTML report. The GUI provides user-friendly access to state-of-the-art methods embodied in the Bioconductor software repository.
- Publication
Bioinformatics (Oxford, England), 2006, Vol 22, Issue 7, p897
- ISSN
1367-4803
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/btl025