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- Title
CARHTA GENE: multipopulation integrated genetic and radiation hybrid mapping.
- Authors
de Givry, Simon; Bouchez, Martin; Chabrier, Patrick; Milan, Denis; Schiex, Thomas
- Abstract
CAR(H)(T)A GENE: is an integrated genetic and radiation hybrid (RH) mapping tool which can deal with multiple populations, including mixtures of genetic and RH data. CAR(H)(T)A GENE: performs multipoint maximum likelihood estimations with accelerated expectation-maximization algorithms for some pedigrees and has sophisticated algorithms for marker ordering. Dedicated heuristics for framework mapping are also included. CAR(H)(T)A GENE: can be used as a C++ library, through a shell command and a graphical interface. The XML output for companion tools is integrated.
- Publication
Bioinformatics (Oxford, England), 2005, Vol 21, Issue 8, p1703
- ISSN
1367-4803
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/bti222