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- Title
CEBS object model for systems biology data, SysBio-OM.
- Authors
Xirasagar, Sandhya; Gustafson, Scott; Merrick, B Alex; Tomer, Kenneth B; Stasiewicz, Stanley; Chan, Denny D; Yost, Kenneth J, 3rd; Yates, John R, 3rd; Sumner, Susan; Xiao, Nianqing; Waters, Michael D
- Abstract
To promote a systems biology approach to understanding the biological effects of environmental stressors, the Chemical Effects in Biological Systems (CEBS) knowledge base is being developed to house data from multiple complex data streams in a systems friendly manner that will accommodate extensive querying from users. Unified data representation via a single object model will greatly aid in integrating data storage and management, and facilitate reuse of software to analyze and display data resulting from diverse differential expression or differential profile technologies. Data streams include, but are not limited to, gene expression analysis (transcriptomics), protein expression and protein-protein interaction analysis (proteomics) and changes in low molecular weight metabolite levels (metabolomics).
- Publication
Bioinformatics (Oxford, England), 2004, Vol 20, Issue 13, p2004
- ISSN
1367-4803
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/bth189