We found a match
Your institution may have access to this item. Find your institution then sign in to continue.
- Title
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets.
- Authors
Pertea, Geo; Huang, Xiaoqiu; Liang, Feng; Antonescu, Valentin; Sultana, Razvan; Karamycheva, Svetlana; Lee, Yuandan; White, Joseph; Cheung, Foo; Parvizi, Babak; Tsai, Jennifer; Quackenbush, John
- Abstract
TGICL is a pipeline for analysis of large Expressed Sequence Tags (EST) and mRNA databases in which the sequences are first clustered based on pairwise sequence similarity, and then assembled by individual clusters (optionally with quality values) to produce longer, more complete consensus sequences. The system can run on multi-CPU architectures including SMP and PVM.
- Publication
Bioinformatics (Oxford, England), 2003, Vol 19, Issue 5, p651
- ISSN
1367-4803
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/btg034