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- Title
A literature-based method for assessing the functional coherence of a gene group.
- Authors
Raychaudhuri, Soumya; Altman, Russ B
- Abstract
Many experimental and algorithmic approaches in biology generate groups of genes that need to be examined for related functional properties. For example, gene expression profiles are frequently organized into clusters of genes that may share functional properties. We evaluate a method, neighbor divergence per gene (NDPG), that uses scientific literature to assess whether a group of genes are functionally related. The method requires only a corpus of documents and an index connecting the documents to genes.
- Publication
Bioinformatics (Oxford, England), 2003, Vol 19, Issue 3, p396
- ISSN
1367-4803
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/btg002