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Title
TFBS: Computational framework for transcription factor binding site analysis.
Authors
Lenhard, Boris; Wasserman, Wyeth W
Abstract
TFBS is a set of integrated, object-oriented Perl modules for transcription factor binding site detection and analysis. It implements objects representing specificity profile matrices, binding sites and sets thereof, pattern generators, and pattern database interfaces. The modules are interoperable with the BioPerl open source system.