We found a match
Your institution may have access to this item. Find your institution then sign in to continue.
- Title
CpGProD: identifying CpG islands associated with transcription start sites in large genomic mammalian sequences.
- Authors
Ponger, Loïc; Mouchiroud, Dominique
- Abstract
CpGProD is an application for identifying mammalian promoter regions associated with CpG islands in large genomic sequences. Although it is strictly dedicated to this particular promoter class corresponding to approximately 50% of the genes, CpGProD exhibits a higher sensitivity and specificity than other tools used for promoter prediction. Notably, CpGProD uses different parameters according to species (human, mouse) studied. Moreover, CpGProD predicts the promoter orientation on the DNA strand.
- Publication
Bioinformatics (Oxford, England), 2002, Vol 18, Issue 4, p631
- ISSN
1367-4803
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/18.4.631