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- Title
Design of a compartmentalized shotgun assembler for the human genome.
- Authors
Huson, D H; Reinert, K; Kravitz, S A; Remington, K A; Delcher, A L; Dew, I M; Flanigan, M; Halpern, A L; Lai, Z; Mobarry, C M; Sutton, G G; Myers, E W
- Abstract
Two different strategies for determining the human genome are currently being pursued: one is the "clone-by-clone" approach, employed by the publicly funded project, and the other is the "whole genome shotgun assembler" approach, favored by researchers at Celera Genomics. An interim strategy employed at Celera, called compartmentalized shotgun assembly, makes use of preliminary data produced by both approaches. In this paper we describe the design, implementation and operation of the "compartmentalized shotgun assembler".
- Publication
Bioinformatics (Oxford, England), 2001, Vol 17 Suppl 1, pS132
- ISSN
1367-4803
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/17.suppl_1.s132