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- Title
Segmentation of long genomic sequences into domains with homogeneous composition with BASIO software.
- Authors
Ramensky, V E; Makeev, V J; Roytberg, M A; Tumanyan, V G
- Abstract
We present a software system BASIO that allows one to segment a sequence into regions with homogeneous nucleotide composition at a desired length scale. The system can work with arbitrary alphabet and therefore can be applied to various (e.g. protein) sequences. Several sequences of complete genomes of eukaryotes are used to demonstrate the efficiency of the software.
- Publication
Bioinformatics (Oxford, England), 2001, Vol 17, Issue 11, p1065
- ISSN
1367-4803
- Publication type
Journal Article
- DOI
10.1093/bioinformatics/17.11.1065