Works matching DE "METABOLOMICS"

Results: 5000

High performance data integration for large-scale analyses of incomplete Omic profiles using Batch-Effect Reduction Trees (BERT).

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-62237-4

By:

Schumann, Yannis;
Schlumbohm, Simon;
Neumann, Julia E.;
Neumann, Philipp

Publication type:

Article

Identification of Botanicals Based on Their Chemical Barcode Using Ultraperformance Liquid Chromatography–Mass Spectrometry.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2025, v. 39, n. 18, p. 1, doi. 10.1002/rcm.10081

By:

Kumar, Akhilesh;
Ali, Mohsin;
Kumar, Avinash;
Mishra, Dipak Kumar;
Kanojiya, Sanjeev

Publication type:

Article

Mechanisms of Anemarrhenae Rhizoma in Treating Osteoporosis in Rats: An Integrated Metabolomics and Transcriptomics Analysis.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2025, v. 39, n. 18, p. 1, doi. 10.1002/rcm.10069

By:

Wen, Yuxin;
Huang, Zhuang;
Hong, Xing;
Jiang, Qi;
Han, Lintao;
Wang, Qiong;
Wang, Jun;
Shang, Xiaoqiang;
Wu, Zhenwei;
Huang, Tao

Publication type:

Article

Metabolomics Revealed Cadmium Exposure Associated with Alterations in Serum Metabolism in Children.

Published in:

Biological Trace Element Research, 2025, v. 203, n. 9, p. 4429, doi. 10.1007/s12011-024-04505-w

By:

Li, Miaoqian;
Wan, Ping;
Qiao, Lichun;
Wen, Xinyue;
Deng, Huan;
Lin, Xue;
Lei, Jingke;
Han, Jing

Publication type:

Article

Untargeted Metabolomics Revealed Metabolomic Profile in Patients with Primary Systemic Sclerosis.

Published in:

Applied Biochemistry & Biotechnology, 2025, v. 197, n. 7, p. 4516, doi. 10.1007/s12010-025-05249-6

By:

Tang, Jinling;
Ruan, Pinglang;
Wei, Zhu

Publication type:

Article

Tongue Coating Metabolites and Microbiome Associated With Intra‐Oral Halitosis.

Published in:

Oral Diseases, 2025, v. 31, n. 7, p. 2356, doi. 10.1111/odi.15255

By:

Xiao, Xuan;
Li, Kaiyi;
Shi, Zhaocheng;
Song, Zhifeng

Publication type:

Article

Integrated Analysis of Oral Microbiome and Metabolome in T2DM Patients With Varying Glycemic Status.

Published in:

Oral Diseases, 2025, v. 31, n. 7, p. 2308, doi. 10.1111/odi.15220

By:

Diao, Jing;
Zhang, Yanling;
Zhang, Xiaoli;
Jia, Shuyuan;
Lei, Yajuan;
Ma, Bowen;
Li, Xiaodong;
Zheng, Shuguo;
Yuan, Chao

Publication type:

Article

Towards non-invasive diagnosis of glioblastoma: identifying metabolic biomarkers in liquid biopsies using a ROC-based approach.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-03310-8

By:

Gallo, Margareth Borges Coutinho

Publication type:

Article

Metabolomic profiling reveals interindividual metabolic variability and its association with cardiovascular-kidney-metabolic syndrome risk.

Published in:

Cardiovascular Diabetology, 2025, v. 24, n. 1, p. 1, doi. 10.1186/s12933-025-02881-8

By:

Zhou, Meng;
Sun, Wenxiu;
Gao, Yuhan;
Jiang, Bei;
Sun, Tianwei;
Xu, Rui;
Zhang, Xiujuan;
Wang, Qian;
Xuan, Qiuhui;
Ma, Shizhan

Publication type:

Article

Serum metabolomics in pulmonary sarcoidosis: metabolic signatures across prognoses.

Published in:

BMC Pulmonary Medicine, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12890-025-03863-y

By:

Zhu, Dafu;
Chen, Jianglong;
Zhang, Li;
Li, Hongxu;
Wang, Jingyi;
Song, Jiacui;
Weng, Dong;
Zhang, Pengcheng;
Li, Qiuhong;
Zhang, Yuan;
Zhao, Mengmeng

Publication type:

Article

Combined metabolome and transcriptome to analyze the regulatory network of key enzymes in the synthesis of senkirkine in Emilia sonchifolia.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-07079-4

By:

Yao, Jinli;
Qin, Yanqing;
Tu, Dongping;
Huang, Yumei;
Liang, Liuguan;
Cai, Wenhui;
Huang, Mingli;
Zhu, Xiaoqi;
Lao, Xinling

Publication type:

Article

Pathway metabolite ratios reveal distinctive glutamine metabolism in a subset of proliferating cells.

Published in:

Molecular Systems Biology, 2025, v. 21, n. 8, p. 983, doi. 10.1038/s44320-025-00099-0

By:

Santiappillai, Nancy T;
Cao, Yue;
Hakeem-Sanni, Mariam F;
Yang, Jean;
Quek, Lake-Ee;
Hoy, Andrew J

Publication type:

Article

From microbes to molecules: unveiling host-microbe interactions with spatial metabolomics.

Published in:

Molecular Systems Biology, 2025, v. 21, n. 8, p. 947, doi. 10.1038/s44320-025-00129-x

By:

Stüwe, Malin;
Petersen, Lars-Erik;
Liebeke, Manuel

Publication type:

Article

Application of starch-degradation bacteria in cigar tobacco leaf fermentation: effects on starch degradation, microbial communities and metabolic pathways.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1632731

By:

Yin, Yuming;
Song, Xueru;
Cui, Yonghe;
Zhang, Jilai;
Fu, Kejian;
Zhou, Qi;
Feng, Yuxing;
Huang, Jiakui;
Hu, Chenglei;
Deng, Yishu;
Su, Youbo

Publication type:

Article

Exploring the effects of resveratrol and β-hydroxy-β-methylbutyric acid under different protein levels on the ileal health of tibetan sheep.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1612170

By:

Gao, Wei;
Zhu, Kaina;
Zhang, Xianhua;
Saren, Geerli;
Zhang, Yu;
Gan, Jiacheng;
Hou, Shengzhen;
Gui, Linsheng

Publication type:

Article

Unveiling the metabolic roles: how lead exposure elevates uric acid levels.

Published in:

Environmental Sciences Europe, 2025, v. 37, n. 1, p. 1, doi. 10.1186/s12302-025-01186-7

By:

Liu, Wanlu;
Deng, Yaotang;
Li, Guoliang;
Zhao, Zhiqiang;
Zhu, Xinyu;
Zhou, Jiazhen;
Yi, Mushi;
Xian, Simin;
Hu, Yue;
Wu, Youyi;
Yang, Qiaoyuan;
Liu, Lili;
Bai, Yansen

Publication type:

Article

scFv intrabody targeting wildtype TDP-43 presents protective effects in a cellular model of TDP-43 proteinopathy.

Published in:

PLoS ONE, 2025, v. 20, n. 8, p. 1, doi. 10.1371/journal.pone.0322021

By:

Al Ojaimi, Yara;
Hergesheimer, Rudolf;
Chami, Anna A.;
Alarcan, Hugo;
Augros, Johanna;
Dangoumau, Audrey;
Haouari, Shanez;
Bourgeais, Jérôme;
Lefevre, Antoine;
Osman, Samira;
Emond, Patrick;
Vourc'h, Patrick;
Andres, Christian R.;
Corcia, Philippe;
Herault, Olivier;
Martineau, Pierre;
Lanznaster, Débora;
Blasco, Hélène

Publication type:

Article

A new spin on chemotaxonomy: Using non‐proteogenic amino acids as a test case.

Published in:

Applications in Plant Sciences, 2025, v. 13, n. 4, p. 1, doi. 10.1002/aps3.70006

By:

Gibson, Makenzie;
Thives Santos, William;
Oyler, Alan R.;
Busta, Lucas;
Schenck, Craig A.

Publication type:

Article

Analysis of plant metabolomics data using identification‐free approaches.

Published in:

Applications in Plant Sciences, 2025, v. 13, n. 4, p. 1, doi. 10.1002/aps3.70001

By:

Yuan, Xinyu;
Smith, Nathaniel S. S.;
Moghe, Gaurav D.

Publication type:

Article

Multiomics profiling reveals systemic biological responses to severe subacute exposure to heated tobacco products in rats.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-14119-4

By:

Zhou, Pingya;
Wu, Tian;
Chai, Yidi;
Huang, Yuchuan;
Liu, Kai;
Lu, Yanrong;
Liu, Jingping;
Liang, Kun

Publication type:

Article

Vitamin D metabolome in preterm infants: insights into postnatal metabolism.

Published in:

Clinical Chemistry & Laboratory Medicine, 2025, v. 63, n. 9, p. 1823, doi. 10.1515/cclm-2025-0311

By:

Matejek, Tomas;
Prchal, Lukas;
Zapletalova, Bara;
Pokorna, Veronika;
Malakova, Jana;
Palicka, Vladimir;
Soukup, Ondrej

Publication type:

Article

Chromosome-level genome assembly provides insights into flavonoid biosynthesis in stems and leaves and fatty acid biosynthesis in kernels of Erythropalum scandens.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-07075-8

By:

Yang, Tianwei;
Huang, Shiyu;
Zhang, Xiangjun;
Tian, Shanshan;
Gao, Manrong;
Zhang, Shangwen

Publication type:

Article

Integrating metabolomics and high-throughput phenotyping to elucidate metabolic and phenotypic responses to early-season drought stress in Nordic spring wheat.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06914-y

By:

Wonneberger, Ronja;
D'Auria, John Charles;
Neumann, Kerstin;
Hansen, Pernille Bjarup;
Dieseth, Jon Arne;
Nielsen, Linda Kærgaard;
Niemelä, Tarja;
Odilbekov, Firuz;
Novakazi, Fluturë;
Bengtsson, Therése;
Patpour, Mehran;
Hovmøller, Mogens Støvring;
Manninen, Outi;
Veteläinen, Merja;
Alsheikh, Muath;
Windju, Susanne;
Vallenback, Pernilla;
Jalli, Marja;
Johansson, Annika;
Jahoor, Ahmed

Publication type:

Article

Analysis of the formation mechanism and regulation pathway of oat silage off-flavor based on microbial-metabolite interaction network.

Published in:

BMC Microbiology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12866-025-04166-2

By:

Jiajie, Zhao;
Xiaochen, Deng;
Junfeng, Hao;
Mingjiu, Wang;
Gentu, Ge

Publication type:

Article

Analysis of the formation mechanism and regulation pathway of oat silage off-flavor based on microbial-metabolite interaction network.

Published in:

BMC Microbiology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12866-025-04166-2

By:

Jiajie, Zhao;
Xiaochen, Deng;
Junfeng, Hao;
Mingjiu, Wang;
Gentu, Ge

Publication type:

Article

Catechin gallate triggers metabolomic and lipidomic alteration in Toxoplasma gondii.

Published in:

Parasites & Vectors, 2025, v. 18, n. 1, p. 1, doi. 10.1186/s13071-025-06869-x

By:

Greggs, Jazmyn R.;
Sharma, Homa Nath;
Abugri, Daniel A.

Publication type:

Article

Preventive regulation of cellular heat stress injury by mung bean polyphenols revealed by multi-omics analysis.

Published in:

NPJ Science of Food, 2025, v. 9, n. 1, p. 1, doi. 10.1038/s41538-025-00522-8

By:

Feng, Yuchao;
Zhang, Shu;
Suo, Decheng;
Fu, Tianxin;
Li, Xiaonan;
Wang, Changyuan;
Fan, Xia

Publication type:

Article

Metabolomic stratification of shock: pathophysiological insights for personalized critical care.

Published in:

Annals of Intensive Care, 2025, v. 15, n. 1, p. 1, doi. 10.1186/s13613-025-01532-1

By:

Sangla, Frederic;
Bendjelid, Karim;
Aletti, Federico;
Ribas, Vicente;
Herpain, Antoine;
Pinto, Bernardo Bollen;
Legouis, David

Publication type:

Article

Vildagliptin modulates the microbiota and induces an immunometabolic profile compatible with neuroprotection in type 2 diabetes.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-12990-9

By:

de Macedo, Juliane Colombo Carrer;
Guadagnini, Dioze;
Assalin, Heloisa B.;
Oliveira, Emília Sousa;
Magro, Daniela O.;
Alborghetti, Marcos R.;
Sforça, Maurício L.;
Rocco, Silvana A.;
Santos, Andrey;
Saad, Mario J. A.

Publication type:

Article

Characteristic alterations of gut microbiota and metabolites in patients with perianal abscess: a multi-omics analysis.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1557972

By:

Ma, Huangfu;
Fang, Jingjing;
Li, Mengjie;
Qin, Yige;
Wang, Yanmei;
Kang, Seong-Gook;
Huang, Kunlun;
Tong, Tao

Publication type:

Article

Identification of clinically relevant profiles in colorectal cancer through integrated analysis of bacterial DNA and metabolome in serum.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1562416

By:

Vicente-Valor, Juan;
Tesolato, Sofía;
Gómez-Garre, Dulcenombre;
Paz-Cabezas, Mateo;
Ortega-Hernández, Adriana;
Fernández-Hernández, Constanza;
de la Serna, Sofía;
Domínguez-Serrano, Inmaculada;
Dziakova, Jana;
Rivera, Daniel;
Rupérez, Francisco-Javier;
García, Antonia;
Torres, Antonio;
Iniesta, Pilar

Publication type:

Article

Integrated transcriptome, GWAS, and metabolome revealed the mechanism of seed germination in sorghum.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1601899

By:

Ju, Lan;
Liu, Ruizhen;
Cheng, Xiaoqiang;
Wang, Yao;
Lv, Xin;
Chu, Jianqiang;
Niu, Hao;
Yan, Haisheng;
Wang, Yubin;
Fan, Fangfang;
Ping, Junai

Publication type:

Article

Gut microbiome and serum metabolome alterations in osteosarcoma patients.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1616603

By:

Li, Chao;
Chen, Yu;
Yao, Weitao;
Zhang, Peng;
Wang, Xin;
Qu, Guoxin;
Ren, Zhigang;
Wang, Jiaqiang

Publication type:

Article

Response of microbial communities and physical and chemical properties in inoculated soils with Fusarium oxysporum Schl. F. sp. Benincasae to different root exudates resistant to fusarium wilt.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1595426

By:

Wu, Haolong;
Fu, Junyu;
Liao, Daolong;
Chen, Yilin;
Zhao, Zhen;
Liu, Zifan;
Zhou, Bin

Publication type:

Article

Characteristic alterations of gut microbiota and metabolites in patients with perianal abscess: a multi-omics analysis.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1557972

By:

Ma, Huangfu;
Fang, Jingjing;
Li, Mengjie;
Qin, Yige;
Wang, Yanmei;
Kang, Seong-Gook;
Huang, Kunlun;
Tong, Tao

Publication type:

Article

Predicting treatment outcome in congenital adrenal hyperplasia using urine steroidomics and machine learning.

Published in:

European Journal of Endocrinology, 2025, v. 193, n. 1, p. 10, doi. 10.1093/ejendo/lvaf121

By:

Abawi, Ozair;
Sommer, Grit;
Grössl, Michael;
Halbsguth, Ulrike;
Toit, Therina du;
Hannema, Sabine E;
Bruin, Christiaan de;
Charmandari, Evangelia;
Akker, Erica L T van den;
Leichtle, Alexander B;
Flück, Christa E

Publication type:

Article

Exploring the Therapeutic Effects of the ZhiZhu Pill on Rats with Chronic Transmission Constipation Based on Intestinal Microbiota and Metabolomics.

Published in:

Natural Product Communications, 2025, v. 20, n. 7, p. 1, doi. 10.1177/1934578X251346009

By:

Du, Lijuan;
Tang, Shi-yu;
Zhan, Yu;
Yin, Ge;
Tang, Xue gui

Publication type:

Article

Characterization of a Drosophila model to study functions of guarana seeds.

Published in:

PLoS ONE, 2025, v. 20, n. 7, p. 1, doi. 10.1371/journal.pone.0328985

By:

Manica-Cattani, Maria Fernanda;
Mânica da Cruz, Ivana Beatrice;
Sato-Miyata, Yukiko;
Trindade, Lucas Siqueira;
Rogalski, Felipe;
Ribeiro, Euler Esteves;
Tsuda, Manabu;
Aigaki, Toshiro

Publication type:

Article

Changes in gene expression pattern in hypoxia-induced MCF-7 breast cancer stem cells and the impact of their secretome on angiogenesis related genes in HUVECs.

Published in:

Pharmacy Practice (1886-3655), 2025, v. 23, n. 2, p. 1, doi. 10.18549/PharmPract.2025.2.3114

By:

Hammad, Hana M.;
Zihlif, Malek A.;
Thiab, Tuqa Abu;
Imraish, Amer

Publication type:

Article

Oligosaccharides from the seeds of Dolichos lablab L. promote gut microbial metabolite L-arginine production to alleviate cyclophosphamide-induced immunosuppression.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1587426

By:

Liu, Ben;
Jin, Jiayi;
Zhou, Yuming;
Shang, Zhipeng;
Meng, Peng;
Du, Maoru;
Geng, Feng;
Gao, Xue;
Zhao, Feng;
Su, Zhenguo;
Pan, Xiaohong

Publication type:

Article

Distinct cervical microbiome and metabolite profiles before and after menopause: implications for cervical cancer progression.

Published in:

Frontiers in Cellular & Infection Microbiology, 2025, p. 1, doi. 10.3389/fcimb.2025.1589277

By:

Kawasaki, Rie;
Kukimoto, Iwao;
Nishio, Eiji;
Otani, Sayaka;
Nishizawa, Haruki;
Maeda, Yasuhiro;
Iwata, Aya;
Fujii, Takuma

Publication type:

Article

代谢组学在护理研究中的应用现状及挑战.

Published in:

Chinese Nursing Research, 2025, v. 39, n. 13, p. 2293, doi. 10.12102/j.issn.1009-6493.2025.13.023

By:

王进波;
吴姗;
黄蓉蓉;
陈代凤;
洪梅;
李审绥

Publication type:

Article

Metabolic Alterations Associated With Rapidly Progressive Chronic Kidney Disease in Cats.

Published in:

Journal of Veterinary Internal Medicine, 2025, v. 39, n. 4, p. 1, doi. 10.1111/jvim.70170

By:

van Mulders, Laurens;
vanden Broecke, Ellen;
Mortier, Femke;
de Paepe, Ellen;
Vanhaecke, Lynn;
Daminet, Sylvie

Publication type:

Article

Insulin resistance and serum metabolomics improvement in subjects with impaired glucose tolerance treated with Hibiscus esculentus L.

Published in:

Vojnosanitetski Pregled: Military Medical & Pharmaceutical Journal of Serbia, 2023, v. 80, n. 3, p. 235, doi. 10.2298/VSP210406040C

By:

Lin Chen;
Qi Wang;
Wenjun Sha;
Cuiping Zhang;
Tian Shen;
Ming Lu;
Tao Lei

Publication type:

Article

Effects of Hypoxia and Reoxygenation on Metabolic Profiles of Cardiomyocytes.

Published in:

Cell Biochemistry & Biophysics, 2024, v. 82, n. 2, p. 969, doi. 10.1007/s12013-024-01249-1

By:

Condori, Luis Daniel Montañez;
Vivas, Cristofher Victor;
Barreto, Yan Borges;
Gomes, Ligia Ferreira;
Alencar, Adriano Mesquita;
Bloise, Antonio Carlos

Publication type:

Article

Berberine and RNAi-Targeting Telomerase Reverse Transcriptase (TERT) and/or Telomerase RNA Component (TERC) Caused Oxidation in Colorectal Cancer Cell Line, HCT 116: An Integrative Approach using Molecular and Metabolomic Studies.

Published in:

Cell Biochemistry & Biophysics, 2024, v. 82, n. 1, p. 153, doi. 10.1007/s12013-023-01210-8

By:

Samad, Muhammad Azizan;
Saiman, Mohd Zuwairi;
Abdul Majid, Nazia;
Karsani, Saiful Anuar;
Yaacob, Jamilah Syafawati

Publication type:

Article

A Novel Urinary Metabolite Signature for Non-invasive Post-stroke Depression Diagnosis.

Published in:

Cell Biochemistry & Biophysics, 2015, v. 72, n. 3, p. 661, doi. 10.1007/s12013-014-0472-9

By:

Zhang, Wei;
Zhang, Xin-an

Publication type:

Article

Association of Plasma Selenium and Its Untargeted Metabolomic Profiling with Cervical Cancer Prognosis.

Published in:

Biological Trace Element Research, 2023, v. 201, n. 10, p. 4637, doi. 10.1007/s12011-022-03552-5

By:

Qi, Lei;
Wang, Yuanyuan;
Wang, Ruixiang;
Wang, Mingxing;
Jablonska, Ewa;
Zhou, Huihui;
Su, Shengqi;
Jia, Yuehui;
Zhang, Yiyi;
Li, Qi;
Wang, Tong

Publication type:

Article

LC/MS/MS-Based Liver Metabolomics to Identify Chronic Liver Injury Biomarkers Following Exposure to Arsenic in Rats.

Published in:

Biological Trace Element Research, 2022, v. 200, n. 10, p. 4355, doi. 10.1007/s12011-021-03026-0

By:

Bi, Dingnian;
Shi, Mingyang;
Hu, Qian;
Wang, Hongling;
Lou, Didong;
Zhang, Aihua;
Hu, Yong

Publication type:

Article

Metabolomic Analysis Reveals the Adaptation in the P. przewalskii to Se-Deprived Environment.

Published in:

Biological Trace Element Research, 2022, v. 200, n. 8, p. 3608, doi. 10.1007/s12011-021-02971-0

By:

Zhang, Qionglian;
Zhao, Kui;
Shen, Xiaoyun

Publication type:

Article