Works matching DE "CHROMATIN-remodeling complexes"

Results: 647

Brachyury Expression in Atypical Teratoid/Rhabdoid Tumor.

Published in:

International Journal of Surgical Pathology, 2025, v. 33, n. 4, p. 842, doi. 10.1177/10668969241291896

By:

Terzioğlu, Havva Gökçe;
Uzun, Sarp;
Hench, Juergen;
Babaoğlu, Berrin;
Matter, Matthias;
Söylemezoğlu, Figen;
Kösemehmetoğlu, Kemal

Publication type:

Article

IDH1 regulates human erythropoiesis by eliciting chromatin state reprogramming.

Published in:

eLife, 2025, p. 1, doi. 10.7554/eLife.100406

By:

Mengjia Li;
Hengchao Zhang;
Xiuyun Wu;
Mengqi Yu;
Qianqian Yang;
Lei Sun;
Wei Li;
Zhongxing Jiang;
Fumin Xue;
Ting Wang;
Xuili An;
Lixiang Chen

Publication type:

Article

PBRM1 mutations might render a subtype of biliary tract cancers sensitive to drugs targeting the DNA damage repair system.

Published in:

NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00409-5

By:

Zimmer, Kai;
Kocher, Florian;
Untergasser, Gerold;
Kircher, Brigitte;
Amann, Arno;
Baca, Yasmine;
Xiu, Joanne;
Korn, W. Micheal;
Berger, Martin D.;
Lenz, Heinz-Josef;
Puccini, Alberto;
Fontana, Elisa;
Shields, Anthony F.;
Marshall, John L.;
Hall, Michael;
El-Deiry, Wafik S.;
Hsiehchen, David;
Macarulla, Teresa;
Tabernero, Josep;
Pichler, Renate

Publication type:

Article

The Chromatin Remodeling Factor BrCHR39 Targets DNA Methylation to Positively Regulate Apical Dominance in Brassica rapa.

Published in:

Plants (2223-7747), 2023, v. 12, n. 6, p. 1384, doi. 10.3390/plants12061384

By:

Zhu, Wei;
Xie, Zhengqing;
Chu, Zhenni;
Ding, Yakun;
Shi, Gongyao;
Chen, Weiwei;
Wei, Xiaochun;
Yuan, Yuxiang;
Wei, Fang;
Tian, Baoming

Publication type:

Article

The Histone Acetyltransferase GCN5 and the Associated Coactivators ADA2: From Evolution of the SAGA Complex to the Biological Roles in Plants.

Published in:

Plants (2223-7747), 2021, v. 10, n. 2, p. 308, doi. 10.3390/plants10020308

By:

Vlachonasios, Konstantinos;
Poulios, Stylianos;
Mougiou, Niki;
Kawabe, Akira

Publication type:

Article

Dual engagement of the nucleosomal acidic patches is essential for deposition of histone H2A.Z by SWR1C.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.94869

By:

Baier, Alexander S.;
Gioacchini, Nathan;
Eek, Priit;
Leith, Erik M.;
Tan, Song;
Peterson, Craig L.

Publication type:

Article

Coevolution of the CDCA7-HELLS ICF-related nucleosome remodeling complex and DNA methyltransferases.

Published in:

eLife, 2023, p. 1, doi. 10.7554/eLife.86721

By:

Hironori Funabiki;
Wassing, Isabel E.;
Qingyuan Jia;
Ji-Dung Luo;
Carroll, Thomas

Publication type:

Article

De novo splice site variant of ARID1B associated with pathogenesis of Coffin–Siris syndrome.

Published in:

Molecular Genetics & Genomic Medicine, 2019, v. 7, n. 12, p. N.PAG, doi. 10.1002/mgg3.1006

By:

Pranckėnienė, Laura;
Siavrienė, Evelina;
Gueneau, Lucie;
Preikšaitienė, Eglė;
Mikštienė, Violeta;
Reymond, Alexandre;
Kučinskas, Vaidutis

Publication type:

Article

The absence of Brm exacerbates photocarcinogenesis.

Published in:

Experimental Dermatology, 2012, v. 21, n. 8, p. 599, doi. 10.1111/j.1600-0625.2012.01522.x

By:

Halliday, Gary M.;
Zhou, Yue;
Sou, Paul W.;
Huang, Xiao X. J.;
Rana, Sabita;
Bugeja, Matthew J.;
Painter, Nicole;
Scolyer, Richard A.;
Muchardt, Christian;
Di Girolamo, Nick;
Guy Lyons, J.

Publication type:

Article

The histone H2B Arg95 residue efficiently recruits the transcription factor Spt16 to mediate Ste5 expression of the pheromone response pathway.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-37339-y

By:

Sulaiman, Abdallah Alhaj;
Ali, Reem;
Ramotar, Dindial

Publication type:

Article

Prognostic values of molecular subtypes and SWI/SNF protein expression in de‐differentiated/undifferentiated endometrial carcinoma.

Published in:

Histopathology, 2025, v. 86, n. 7, p. 1053, doi. 10.1111/his.15411

By:

Shin, Chae Young;
Gokbayrak, Bengul;
Tao, Valerie L;
Almadani, Noorah;
S Li, Eunice;
Ho, Rebecca;
Kommoss, Felix KF;
Huvila, Jutta;
Chiu, Derek;
Leung, Samuel;
Tessier‐Cloutier, Basile;
Huntsman, David G;
Gilks, C Blake;
McAlpine, Jessica N;
Hoang, Lynn;
Wang, Yemin

Publication type:

Article

Epithelioid sarcoma with retained INI1 (SMARCB1) expression.

Published in:

Histopathology, 2021, v. 78, n. 3, p. 464, doi. 10.1111/his.14236

By:

Song, Linda;
Stashek, Kristen M;
Benyounes, Amin;
Davis, Derik L;
Mulligan, Michael E;
Ng, Vincent Y.;
Kallen, Michael E

Publication type:

Article

Frequent co-inactivation of the SWI/SNF subunits SMARCB1, SMARCA2 and PBRM1 in malignant rhabdoid tumours.

Published in:

Histopathology, 2015, v. 67, n. 1, p. 121, doi. 10.1111/his.12632

By:

Rao, Qiu;
Xia, Qiu‐yuan;
Wang, Zi‐yu;
Li, Li;
Shen, Qin;
Shi, Shan‐shan;
Wang, Xuan;
Liu, Biao;
Wang, Yan‐fen;
Shi, Qun‐li;
Ma, Heng‐hui;
Lu, Zhen‐feng;
He, Yan;
Zhang, Ru‐song;
Yu, Bo;
Zhou, Xiao‐jun

Publication type:

Article

The Verticillium dahliae Spt-Ada-Gcn5 Acetyltransferase Complex Subunit Ada1 Is Essential for Conidia and Microsclerotia Production and Contributes to Virulence.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.852571

By:

Geng, Qi;
Li, Huan;
Wang, Dan;
Sheng, Ruo-Cheng;
Zhu, He;
Klosterman, Steven J.;
Subbarao, Krishna V.;
Chen, Jie-Yin;
Chen, Feng-Mao;
Zhang, Dan-Dan

Publication type:

Article

Chromatin modification and remodelling: a regulatory landscape for the control of Arabidopsis defence responses upon pathogen attack.

Published in:

Cellular Microbiology, 2012, v. 14, n. 6, p. 829, doi. 10.1111/j.1462-5822.2012.01785.x

By:

Berr, Alexandre;
Ménard, Rozenn;
Heitz, Thierry;
Shen, Wen-Hui

Publication type:

Article

ATM-mediated phosphorylation of the chromatin remodeling enzyme BRG1 modulates DNA double-strand break repair.

Published in:

Oncogene, 2015, v. 34, n. 3, p. 303, doi. 10.1038/onc.2013.556

By:

Kwon, S-J;
Park, J-H;
Park, E-J;
Lee, S-A;
Lee, H-S;
Kang, S W;
Kwon, J

Publication type:

Article

Alterations in chromatin accessibility and DNA methylation in clear cell renal cell carcinoma.

Published in:

Oncogene, 2014, v. 33, n. 41, p. 4961, doi. 10.1038/onc.2013.455

By:

Buck, M J;
Raaijmakers, L M;
Ramakrishnan, S;
Wang, D;
Valiyaparambil, S;
Liu, S;
Nowak, N J;
Pili, R

Publication type:

Article

BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-44081-6

By:

Xiao, Muran;
Kondo, Shinji;
Nomura, Masaki;
Kato, Shinichiro;
Nishimura, Koutarou;
Zang, Weijia;
Zhang, Yifan;
Akashi, Tomohiro;
Viny, Aaron;
Shigehiro, Tsukasa;
Ikawa, Tomokatsu;
Yamazaki, Hiromi;
Fukumoto, Miki;
Tanaka, Atsushi;
Hayashi, Yasutaka;
Koike, Yui;
Aoyama, Yumi;
Ito, Hiromi;
Nishikawa, Hiroyoshi;
Kitamura, Toshio

Publication type:

Article

Cardiomyocyte proliferation is suppressed by ARID1A-mediated YAP inhibition during cardiac maturation.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40203-2

By:

Boogerd, Cornelis J.;
Perini, Ilaria;
Kyriakopoulou, Eirini;
Han, Su Ji;
La, Phit;
van der Swaan, Britt;
Berkhout, Jari B.;
Versteeg, Danielle;
Monshouwer-Kloots, Jantine;
van Rooij, Eva

Publication type:

Article

Single-cell RNA-seq uncovers dynamic processes orchestrated by RNA-binding protein DDX43 in chromatin remodeling during spermiogenesis.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38199-w

By:

Tan, Huanhuan;
Wang, Weixu;
Zhou, Congjin;
Wang, Yanfeng;
Zhang, Shu;
Yang, Pinglan;
Guo, Rui;
Chen, Wei;
Zhang, Jinwen;
Ye, Lan;
Cui, Yiqiang;
Ni, Ting;
Zheng, Ke

Publication type:

Article

Therapeutic targeting potential of chromatin-associated proteins in MLL-rearranged acute leukemia.

Published in:

Cellular Oncology (2211-3428), 2019, v. 42, n. 2, p. 117, doi. 10.1007/s13402-018-0414-4

By:

Xu, Xin;
Schneider, Björn

Publication type:

Article

Mechanism of action of the SWI/SNF family complexes.

Published in:

Nucleus (1949-1034), 2023, v. 14, n. 1, p. 1, doi. 10.1080/19491034.2023.2165604

By:

Chen, Kangjing;
Yuan, Junjie;
Sia, Youyang;
Chen, Zhucheng

Publication type:

Article

Emerging roles of cytoskeletal proteins in regulating gene expression and genome organization during differentiation.

Published in:

Nucleus (1949-1034), 2020, v. 11, n. 1, p. 53, doi. 10.1080/19491034.2020.1742066

By:

Xie, Xin;
Mahmood, S. Raza;
Gjorgjieva, Tamara;
Percipalle, Piergiorgio

Publication type:

Article

The BRCA1 Ubiquitin ligase function sets a new trend for remodelling in DNA repair.

Published in:

Nucleus (1949-1034), 2017, v. 8, n. 2, p. 116, doi. 10.1080/19491034.2016.1267092

By:

Densham, Ruth M.;
Morris, Joanna R.

Publication type:

Article

The connection between BRG1, CTCF and topoisomerases at TAD boundaries.

Published in:

Nucleus (1949-1034), 2017, v. 8, n. 2, p. 150, doi. 10.1080/19491034.2016.1276145

By:

Barutcu, A. Rasim;
Lian, Jane B.;
Stein, Janet L.;
Stein, Gary S.;
Imbalzano, Anthony N.

Publication type:

Article

Nucleosome dynamics during chromatin remodeling in vivo.

Published in:

Nucleus (1949-1034), 2016, v. 7, n. 1, p. 20, doi. 10.1080/19491034.2016.1149666

By:

Ramachandran, Srinivas;
Henikoff, Steven

Publication type:

Article

What we talk about when we talk about nuclear actin.

Published in:

Nucleus (1949-1034), 2013, v. 4, n. 4, p. 291, doi. 10.4161/nucl.25960

By:

Belin, Brittany J;
Mullins, R Dyche

Publication type:

Article

CHD chromatin remodelers and the transcription cycle.

Published in:: Nucleus (1949-1034), 2012, v. 3, n. 1, p. 1
Publication type:: Article

CHD7 Regulates Osteogenic Differentiation of Human Dental Follicle Cells via PTH1R Signaling.

Published in:

Stem Cells International, 2020, p. 1, doi. 10.1155/2020/8882857

By:

Liu, Caojie;
Li, Qiwen;
Xiao, Qingyue;
Gong, Ping;
Kang, Ning

Publication type:

Article

The CHD family chromatin remodeling enzyme, Kismet, promotes both clathrin-mediated and activity-dependent bulk endocytosis.

Published in:

PLoS ONE, 2024, v. 19, n. 3, p. 1, doi. 10.1371/journal.pone.0300255

By:

Hendricks, Emily L.;
Liebl, Faith L. W.

Publication type:

Article

Hepatocellular Brg1 promotes CCl4-induced liver inflammation, ECM accumulation and fibrosis in mice.

Published in:

PLoS ONE, 2023, v. 18, n. 11, p. 1, doi. 10.1371/journal.pone.0294257

By:

Wang, Baocai;
Kaufmann, Benedikt;
Mogler, Carolin;
Zhong, Suyang;
Yin, Yuhan;
Cheng, Zhangjun;
Schmid, Roland M.;
Friess, Helmut;
Hüser, Norbert;
von Figura, Guido;
Hartmann, Daniel

Publication type:

Article

Chromatin remodeling in Cancer: A Gateway to regulate gene Transcription

Published in:

Molecular Oncology, 2012, v. 6, n. 6, p. 611, doi. 10.1016/j.molonc.2012.09.005

By:

Nair, Sujit S.;
Kumar, Rakesh

Publication type:

Article

YAP and TAZ Mediate Osteocyte Perilacunar/Canalicular Remodeling.

Published in:

Journal of Bone & Mineral Research, 2020, v. 35, n. 1, p. 196, doi. 10.1002/jbmr.3876

By:

Kegelman, Christopher D;
Coulombe, Jennifer C;
Jordan, Kelsey M;
Horan, Daniel J;
Qin, Ling;
Robling, Alexander G;
Ferguson, Virginia L;
Bellido, Teresita M;
Boerckel, Joel D

Publication type:

Article

Molecular regulatory mechanisms underlying the adaptability of polyploid plants.

Published in:

2021

By:

Scarrow, Margaret;
Wang, Yiling;
Sun, Genlou

Publication type:

Literature Review

De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology.

Published in:: Microbial Cell Factories, 2012, v. 11, n. 1, p. 36, doi. 10.1186/1475-2859-11-36
Publication type:: Article

Heat memory in plants: histone modifications, nucleosome positioning and miRNA accumulation alter heat memory gene expression.

Published in:

Genes & Genetic Systems, 2021, v. 96, n. 5, p. 229, doi. 10.1266/ggs.21-00040

By:

Nobutoshi Yamaguchi

Publication type:

Article

SMARCE1 suppresses EGFR expression and controls responses to MET and ALK inhibitors in lung cancer.

Published in:

Cell Research, 2015, v. 25, n. 4, p. 445, doi. 10.1038/cr.2015.16

By:

Papadakis, Andreas I;
Sun, Chong;
Knijnenburg, Theo A;
Xue, Yibo;
Grernrum, Wipawadee;
Hölzel, Michael;
Nijkamp, Wouter;
Wessels, Lodewyk FA;
Beijersbergen, Roderick L;
Bernards, Rene;
Huang, Sidong

Publication type:

Article

Baf250a orchestrates an epigenetic pathway to repress the Nkx2.5-directed contractile cardiomyocyte program in the sinoatrial node.

Published in:

Cell Research, 2014, v. 24, n. 10, p. 1201, doi. 10.1038/cr.2014.113

By:

Wu, Meng;
Peng, Siwu;
Yang, Jialiang;
Tu, Zhidong;
Cai, Xiaoqiang;
Cai, Chen-Leng;
Wang, Zhong;
Zhao, Yong

Publication type:

Article

The mINO80 chromatin remodeling complex is required for efficient telomere replication and maintenance of genome stability.

Published in:

Cell Research, 2013, v. 23, n. 12, p. 1396, doi. 10.1038/cr.2013.113

By:

Min, Jin-Na;
Tian, Yanyan;
Xiao, Yang;
Wu, Ling;
Li, Lei;
Chang, Sandy

Publication type:

Article

ARID1A loss promotes RNA editing of CDK13 in an ADAR1-dependent manner.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-01927-9

By:

Zhu, Tianyu;
Li, Qian;
Zhang, Zhe;
Shi, Jiahao;
Li, Yongyun;
Zhang, Feng;
Li, Lingjie;
Song, Xin;
Shen, Jianfeng;
Jia, Renbing

Publication type:

Article

The BAF chromatin remodeling complex licenses planarian stem cells access to ectodermal and mesodermal cell fates.

Published in:

BMC Biology, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12915-023-01730-y

By:

Wiggans, Mallory;
Zhu, Shu Jun;
Molinaro, Alyssa M.;
Pearson, Bret J.

Publication type:

Article

ARID1A-dependent maintenance of H3.3 is required for repressive CHD4-ZMYND8 chromatin interactions at super-enhancers.

Published in:

BMC Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1186/s12915-022-01407-y

By:

Reske, Jake J.;
Wilson, Mike R.;
Armistead, Brooke;
Harkins, Shannon;
Perez, Cristina;
Hrit, Joel;
Adams, Marie;
Rothbart, Scott B.;
Missmer, Stacey A.;
Fazleabas, Asgerally T.;
Chandler, Ronald L.

Publication type:

Article

Evolutionary conserved relocation of chromatin remodeling complexes to the mitotic apparatus.

Published in:

BMC Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1186/s12915-022-01365-5

By:

Messina, Giovanni;
Prozzillo, Yuri;
Monache, Francesca Delle;
Santopietro, Maria Virginia;
Dimitri, Patrizio

Publication type:

Article

Exploring the virulence gene interactome with CRISPR/dCas9 in the human malaria parasite.

Published in:

Molecular Systems Biology, 2020, v. 16, n. 8, p. 1, doi. 10.15252/msb.20209569

By:

Bryant, Jessica M;
Baumgarten, Sebastian;
Dingli, Florent;
Loew, Damarys;
Sinha, Ameya;
Claës, Aurélie;
Preiser, Peter R;
Dedon, Peter C;
Scherf, Artur

Publication type:

Article

Forces driving the three‐dimensional folding of eukaryotic genomes.

Published in:

Molecular Systems Biology, 2018, v. 14, n. 6, p. 1, doi. 10.15252/msb.20188214

By:

Rada‐Iglesias, Alvaro;
Grosveld, Frank G.;
Papantonis, Argyris

Publication type:

Article

The chromatin remodeling protein ATRX positively regulates IRF3-dependent type I interferon production and interferon-induced gene expression.

Published in:

PLoS Pathogens, 2022, v. 18, n. 8, p. 1, doi. 10.1371/journal.ppat.1010748

By:

Stilp, Anne-Charlotte;
Scherer, Myriam;
König, Patrick;
Fürstberger, Axel;
Kestler, Hans A.;
Stamminger, Thomas

Publication type:

Article

A novel SNF2 ATPase complex in Trypanosoma brucei with a role in H2A.Z-mediated chromatin remodelling.

Published in:

PLoS Pathogens, 2022, v. 18, n. 6, p. 1, doi. 10.1371/journal.ppat.1010514

By:

Vellmer, Tim;
Hartleb, Laura;
Fradera Sola, Albert;
Kramer, Susanne;
Meyer-Natus, Elisabeth;
Butter, Falk;
Janzen, Christian J.

Publication type:

Article

Airway models in a pandemic: Suitability of models in modeling SARS-CoV-2.

Published in:

PLoS Pathogens, 2022, v. 18, n. 3, p. 1, doi. 10.1371/journal.ppat.1010432

By:

Teo, Andrew;
Chua, Caroline Lin Lin;
Chan, Louisa L. Y.

Publication type:

Article

HIV-1 requires capsid remodelling at the nuclear pore for nuclear entry and integration.

Published in:

PLoS Pathogens, 2021, v. 17, n. 9, p. 1, doi. 10.1371/journal.ppat.1009484

By:

Guedán, Anabel;
Donaldson, Callum D.;
Caroe, Eve R.;
Cosnefroy, Ophélie;
Taylor, Ian A.;
Bishop, Kate N.

Publication type:

Article

Structures and nucleic acid-binding preferences of the eukaryotic ARID domain.

Published in:

Biological Chemistry, 2022, v. 403, n. 8/9, p. 731, doi. 10.1515/hsz-2021-0404

By:

Korn, Sophie Marianne;
Schlundt, Andreas

Publication type:

Article