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Out of the blue: the independent activity of sulfur-oxidizers and diatoms mediate the sudden color shift of a tropical river.
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- Environmental Microbiome, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s40793-023-00464-2
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- Article
Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds.
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- Scientific Data, 2021, v. 8, n. 1, p. 1, doi. 10.1038/s41597-021-00910-1
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Potential for hydrogen-oxidizing chemolithoautotrophic and diazotrophic populations to initiate biofilm formation in oligotrophic, deep terrestrial subsurface waters.
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- Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0253-y
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Development of gut microbiota during the first 2 years of life.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-13009-3
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Seasonal Variation in Abundance and Diversity of Bacterial Methanotrophs in Five Temperate Lakes.
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- Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00142
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- Article
Hydrostatic pressure influence activity and assembly of bacterial communities in reservoir sediments.
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- Freshwater Biology, 2021, v. 66, n. 6, p. 1049, doi. 10.1111/fwb.13697
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Flood pulse regulation of bacterioplankton community composition in an Amazonian floodplain lake.
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- Freshwater Biology, 2019, v. 64, n. 1, p. 108, doi. 10.1111/fwb.13198
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Lake bacterioplankton dynamics over diurnal timescales.
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- Freshwater Biology, 2017, v. 62, n. 1, p. 191, doi. 10.1111/fwb.12861
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Microscale decoupling of sediment oxygen consumption and microbial biomass in an oligotrophic lake.
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- Freshwater Biology, 2016, v. 61, n. 9, p. 1477, doi. 10.1111/fwb.12787
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- Article
Sequential colonization by river periphyton analysed by microscopy and molecular fingerprinting.
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- Freshwater Biology, 2008, v. 53, n. 7, p. 1359, doi. 10.1111/j.1365-2427.2008.01967.x
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Diurnal variations in the auto- and heterotrophic activity of cyanobacterial phycospheres ( Gloeotrichia echinulata) and the identity of attached bacteria.
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- Freshwater Biology, 2006, v. 51, n. 2, p. 298, doi. 10.1111/j.1365-2427.2005.01493.x
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- Article
High archaeal diversity in Antarctic circumpolar deep waters.
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- Environmental Microbiology Reports, 2011, v. 3, n. 6, p. 689, doi. 10.1111/j.1758-2229.2011.00282.x
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mOTUpan: a robust Bayesian approach to leverage metagenome-assembled genomes for core-genome estimation.
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- NAR Genomics & Bioinformatics, 2022, v. 4, n. 3, p. 1, doi. 10.1093/nargab/lqac060
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Connectivity of Fennoscandian Shield terrestrial deep biosphere microbiomes with surface communities.
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- Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-021-02980-8
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Interactions with DOM and biofilms affect the fate and bioavailability of insecticides to invertebrate grazers.
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- Ecotoxicology, 2012, v. 21, n. 8, p. 2398, doi. 10.1007/s10646-012-0995-z
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Effects of extracellular polymeric and humic substances on chlorpyrifos bioavailability to Chironomus riparius.
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- Ecotoxicology, 2010, v. 19, n. 4, p. 614, doi. 10.1007/s10646-009-0430-2
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- Article
Survival of Campylobacter jejuni and Campylobacter coli water isolates in lake and well water.
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- APMIS, 2018, v. 126, n. 9, p. 762, doi. 10.1111/apm.12879
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Functionally reversible impacts of disturbances on lake food webs linked to spatial and seasonal dependencies.
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- Ecology, 2021, v. 102, n. 4, p. 1, doi. 10.1002/ecy.3283
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Norway spruce postglacial recolonization of Fennoscandia.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28976-4
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Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater.
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- Nature Communications, 2021, v. 8, p. 1, doi. 10.1038/s41467-021-24549-z
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- Article
Summer comes to the Southern Ocean: how phytoplankton shape bacterioplankton communities far into the deep dark sea.
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- Ecosphere, 2019, v. 10, n. 3, p. N.PAG, doi. 10.1002/ecs2.2641
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MICROBIAL CHARACTERIZATION OF ARTIFICIAL SEDIMENT AND COMPARISONS WITH NATURAL SEDIMENTS-IMPLICATIONS FOR TOXICITY TESTING.
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- Environmental Toxicology & Chemistry, 2005, v. 24, n. 11, p. 52, doi. 10.1897/04-523R.1
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Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 12, p. 2503, doi. 10.1038/ismej.2014.135
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Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 7, p. 1413, doi. 10.1038/ismej.2013.26
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Biogeography of bacterial communities exposed to progressive long-term environmental change.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 5, p. 937, doi. 10.1038/ismej.2012.168
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Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 9, p. 1640, doi. 10.1038/ismej.2012.21
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Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species-area relationships.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 6, p. 1127, doi. 10.1038/ismej.2011.184
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Coherent dynamics and association networks among lake bacterioplankton taxa.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 2, p. 330, doi. 10.1038/ismej.2011.113
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Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 10, p. 1571, doi. 10.1038/ismej.2011.41
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Function-specific response to depletion of microbial diversity.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 2, p. 351, doi. 10.1038/ismej.2010.119
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High bicarbonate assimilation in the dark by Arctic bacteria.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 12, p. 1581, doi. 10.1038/ismej.2010.69
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- Article
Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 2, p. 171, doi. 10.1038/ismej.2009.108
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Can the black box be cracked? The augmentation of microbial ecology by high-resolution, automated sensing technologies.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 8, p. 881, doi. 10.1038/ismej.2009.56
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Links between bacterial production, amino-acid utilization and community composition in productive lakes.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2007, v. 1, n. 6, p. 532, doi. 10.1038/ismej.2007.64
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Digital quantification using amplified single-molecule detection.
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- Nature Methods, 2006, v. 3, n. 9, p. 725, doi. 10.1038/nmeth916
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Regional factors as major drivers for microbial community turnover in tropical cascading reservoirs.
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- Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.831716
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The environment drives microbial trait variability in aquatic habitats.
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- Molecular Ecology, 2020, v. 29, n. 23, p. 4605, doi. 10.1111/mec.15656
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Temporal variability of bacterioplankton is habitat driven.
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- Molecular Ecology, 2018, v. 27, n. 21, p. 4322, doi. 10.1111/mec.14855
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Microbial Community Composition and Diversity via 16S rRNA Gene Amplicons: Evaluating the Illumina Platform.
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- PLoS ONE, 2015, v. 10, n. 2, p. 1, doi. 10.1371/journal.pone.0116955
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Host-Specificity and Dynamics in Bacterial Communities Associated with Bloom-Forming Freshwater Phytoplankton.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0085950
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Unveiling Distribution Patterns of Freshwater Phytoplankton by a Next Generation Sequencing Based Approach.
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- PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0053516
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Comparative Metagenomics of Toxic Freshwater Cyanobacteria Bloom Communities on Two Continents.
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- PLoS ONE, 2012, v. 7, n. 8, p. 1, doi. 10.1371/journal.pone.0044002
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PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets.
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- PLoS ONE, 2012, v. 7, n. 8, p. 1, doi. 10.1371/journal.pone.0043093
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- Article
Nitrogenase Gene Amplicons from Global Marine Surface Waters Are Dominated by Genes of Non-Cyanobacteria.
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- PLoS ONE, 2011, v. 6, n. 4, p. 1, doi. 10.1371/journal.pone.0019223
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Character and environmental lability of cyanobacteria‐derived dissolved organic matter.
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- Limnology & Oceanography, 2021, v. 66, n. 2, p. 496, doi. 10.1002/lno.11619
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Ontogenic succession of thermokarst thaw ponds is linked to dissolved organic matter quality and microbial degradation potential.
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- Limnology & Oceanography, 2020, v. 65, p. S248, doi. 10.1002/lno.11349
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Linking dissolved organic matter composition and bacterioplankton communities in an Amazon floodplain system.
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- Limnology & Oceanography, 2020, v. 65, n. 1, p. 63, doi. 10.1002/lno.11250
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Time‐series metatranscriptomes reveal conserved patterns between phototrophic and heterotrophic microbes in diverse freshwater systems.
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- Limnology & Oceanography, 2020, v. 65, p. S101, doi. 10.1002/lno.11306
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- Article
Non‐cyanobacterial diazotrophs dominate nitrogen‐fixing communities in permafrost thaw ponds.
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- Limnology & Oceanography, 2020, v. 65, p. S180, doi. 10.1002/lno.11243
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High methylmercury formation in ponds fueled by fresh humic and algal derived organic matter.
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- Limnology & Oceanography, 2018, v. 63, p. S44, doi. 10.1002/lno.10722
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