Works matching AU Glöckner, Frank Oliver
Results: 73
A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters.
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- PeerJ, 2021, p. 1, doi. 10.7717/peerj.11112
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- Article
FastaValidator: an open-source Java library to parse and validate FASTA formatted sequences.
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- BMC Research Notes, 2014, v. 7, n. 1, p. 2, doi. 10.1186/1756-0500-7-365
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- Article
Prospective FAIR bathymetry data archiving in PANGAEA - Data Publisher for Earth & Environmental Science.
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- Bollettino di Geofisica Teorica ed Applicata, 2021, v. 62, p. 250
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- Article
UniEuk: Time to Speak a Common Language in Protistology!
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- Journal of Eukaryotic Microbiology, 2017, v. 64, n. 3, p. 407, doi. 10.1111/jeu.12414
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- Article
MetaBar -- a tool for consistent contextual dataacquisition and standards compliant submission.
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- BMC Bioinformatics, 2010, v. 11, p. 358, doi. 10.1186/1471-2105-11-358
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- Article
JCoast -- A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes.
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- 2008
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- Product Review
Graphical representation of ribosomal RNA probe accessibility data using ARB software package.
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- BMC Bioinformatics, 2005, v. 6, p. 61, doi. 10.1186/1471-2105-6-61
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- Publication type:
- Article
TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences.
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- BMC Bioinformatics, 2004, v. 5, p. 163, doi. 10.1186/1471-2105-5-163
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- Article
FAIR data in meta-omics research: Using the MODCO schema to describe structural and operational elements of workflows from field to publication.
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- 2019
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- Abstract
Mainstreaming Molecular Biodiversity: A call for a unified and interoperable framework.
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- 2019
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- Abstract
NFDI4BioDiversity: Biodiversity, ecology and environmental data.
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- 2019
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- Abstract
The SILVA Database Project: An ELIXIR core data resource for high-quality ribosomal RNA sequences.
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- 2019
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- Abstract
Microbial Diversity of the Freshwater Sponge Spongilla lacustris.
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- Microbial Ecology, 2005, v. 50, n. 2, p. 206, doi. 10.1007/s00248-004-0172-x
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- Article
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.
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- Bioinformatics, 2016, v. 32, n. 6, p. 929, doi. 10.1093/bioinformatics/btv681
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- Publication type:
- Article
Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 5, p. 918, doi. 10.1038/ismej.2010.180
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- Article
Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 1, p. 107, doi. 10.1038/ismej.2010.94
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- Publication type:
- Article
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 7, p. 882, doi. 10.1038/ismej.2010.6
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- Article
Repositories for Taxonomic Data: Where We Are and What is Missing.
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- Systematic Biology, 2020, v. 69, n. 6, p. 1231, doi. 10.1093/sysbio/syaa026
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- Article
The Genomic Standards Consortium.
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- PLoS Biology, 2011, v. 9, n. 6, p. 1, doi. 10.1371/journal.pbio.1001088
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- Article
Insights into the Genome of Large Sulfur Bacteria Revealed by Analysis of Single Filaments.
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- PLoS Biology, 2007, v. 5, n. 9, p. e230, doi. 10.1371/journal.pbio.0050230
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- Article
Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1<sup>T</sup>.
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- Proteomics, 2008, v. 8, n. 8, p. 1608, doi. 10.1002/pmic.200701017
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- Publication type:
- Article
PANGAEA - Data Publisher for Earth & Environmental Science.
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- Scientific Data, 2023, v. 10, n. 1, p. 1, doi. 10.1038/s41597-023-02269-x
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- Article
Analysis of Bacterial Communities on North Sea Macroalgae and Characterization of the Isolated Planctomycetes Adhaeretor mobilis gen. nov., sp. nov., Roseimaritima multifibrata sp. nov., Rosistilla ulvae sp. nov. and Rubripirellula lacrimiformis sp. nov.
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- Microorganisms, 2021, v. 9, n. 7, p. 1494, doi. 10.3390/microorganisms9071494
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- Article
Identification of Habitat-Specific Biomes of Aquatic Fungal Communities Using a Comprehensive Nearly Full-Length 18S rRNA Dataset Enriched with Contextual Data.
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- PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0134377
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- Article
Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases.
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- Briefings in Bioinformatics, 2021, v. 22, n. 5, p. 1, doi. 10.1093/bib/bbab010
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- Article
A generally applicable lightweight method for calculating a value structure for tools and services in bioinformatics infrastructure projects.
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- Briefings in Bioinformatics, 2019, p. 1215, doi. 10.1093/bib/bbx140
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- Article
Current opportunities and challenges in microbial metagenome analysis—a bioinformatic perspective.
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- Briefings in Bioinformatics, 2012, v. 13, n. 6, p. 728, doi. 10.1093/bib/bbs039
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- Article
Transcriptional response of the model planctomycete Rhodopirellula baltica SH1<sup>T</sup> to changing environmental conditions.
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- BMC Genomics, 2009, v. 10, p. 410, doi. 10.1186/1471-2164-10-410
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- Article
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences.
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- Nature Reviews Microbiology, 2014, v. 12, n. 9, p. 635, doi. 10.1038/nrmicro3330
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- Article
Analysis of bacterial communities in a municipal duck pond during a phytoplankton bloom and isolation of Anatilimnocola aggregata gen. nov., sp. nov., Lacipirellula limnantheis sp. nov. and Urbifossiella limnaea gen. nov., sp. nov. belonging to the phylum Planctomycetes
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- Environmental Microbiology, 2021, v. 23, n. 3, p. 1379, doi. 10.1111/1462-2920.15341
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- Article
Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans Dsij<sup>T</sup>.
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- Environmental Microbiology, 2016, v. 18, n. 12, p. 4610, doi. 10.1111/1462-2920.13584
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- Article
Candidatus Desulfofervidus auxilii, a hydrogenotrophic sulfate-reducing bacterium involved in the thermophilic anaerobic oxidation of methane.
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- Environmental Microbiology, 2016, v. 18, n. 9, p. 3073, doi. 10.1111/1462-2920.13283
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- Article
Single-cell genomics of uncultivated deep-branching magnetotactic bacteria reveals a conserved set of magnetosome genes.
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- Environmental Microbiology, 2016, v. 18, n. 1, p. 21, doi. 10.1111/1462-2920.12907
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- Publication type:
- Article
The gill chamber epibiosis of deep-sea shrimp R imicaris exoculata: an in-depth metagenomic investigation and discovery of Z etaproteobacteria.
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- Environmental Microbiology, 2014, v. 16, n. 9, p. 2723, doi. 10.1111/1462-2920.12406
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- Publication type:
- Article
H alorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader.
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- Environmental Microbiology, 2014, v. 16, n. 8, p. 2525, doi. 10.1111/1462-2920.12393
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- Publication type:
- Article
Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study.
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- Environmental Microbiology, 2012, v. 14, n. 1, p. 268, doi. 10.1111/j.1462-2920.2011.02634.x
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- Publication type:
- Article
Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean.
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- Environmental Microbiology, 2012, v. 14, n. 1, p. 52, doi. 10.1111/j.1462-2920.2011.02555.x
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- Article
Phylogenetic diversity and metagenomics of candidate division OP3.
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- Environmental Microbiology, 2010, v. 12, n. 5, p. 1218, doi. 10.1111/j.1462-2920.2010.02164.x
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- Publication type:
- Article
Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group.
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- Environmental Microbiology, 2010, v. 12, n. 2, p. 422, doi. 10.1111/j.1462-2920.2009.02083.x
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- Publication type:
- Article
Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide.
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- Environmental Microbiology, 2009, v. 11, n. 5, p. 1038, doi. 10.1111/j.1462-2920.2008.01825.x
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- Publication type:
- Article
Whole genome analysis of the marine Bacteroidetes‘ Gramella forsetii’ reveals adaptations to degradation of polymeric organic matter.
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- Environmental Microbiology, 2006, v. 8, n. 12, p. 2201, doi. 10.1111/j.1462-2920.2006.01152.x
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- Publication type:
- Article
Insights into the genomes of archaea mediating the anaerobic oxidation of methane.
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- Environmental Microbiology, 2005, v. 7, n. 12, p. 1937, doi. 10.1111/j.1462-2920.2005.00844.x
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- Publication type:
- Article
Predominance of β-proteobacteria in summer melt pools on Arctic pack ice.
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- Limnology & Oceanography, 2004, v. 49, n. 4, p. 1013, doi. 10.4319/lo.2004.49.4.1013
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- Article
Correction to: A comprehensive fungi-specific 18S rRNA gene sequence primer toolkit suited for diverse research issues and sequencing platforms.
- Published in:
- 2019
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- Correction Notice
eGenomics: Cataloguing Our Complete Genome Collection III.
- Published in:
- 2007
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- Publication type:
- Proceeding
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB.
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- Nucleic Acids Research, 2007, v. 35, n. 21, p. 7188, doi. 10.1093/nar/gkm864
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- Publication type:
- Article
Megx.net—database resources for marine ecological genomics.
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- Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d390, doi. 10.1093/nar/gkj070
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- Publication type:
- Article
An open-source GIS-enabled lookup service for Nagoya Protocol party information.
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- Database: The Journal of Biological Databases & Curation, 2020, v. 2020, p. 1, doi. 10.1093/database/baaa014
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- Publication type:
- Article
Meta-omics data and collection objects (MOD-CO): a conceptual schema and data model for processing sample data in meta-omics research.
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- Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/baz002
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- Publication type:
- Article
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes.
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- Bioinformatics, 2012, v. 28, n. 14, p. 1823, doi. 10.1093/bioinformatics/bts252
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- Publication type:
- Article