Works matching DE "ALTERNATIVE RNA splicing"

Results: 2490

Case Report: Biallelic BRCA1 pathogenic alterations in a Fanconi Anemia patient and clinical implications of variant location.

Published in:

Frontiers in Oncology, 2025, p. 1, doi. 10.3389/fonc.2025.1572310

By:

Young, Colin C.;
Lahr, Ashley;
Nestor, Caroline;
Kaminski, Ashley;
Richardson, Marcy E.;
Arnold, Georgianne L.

Publication type:

Article

PUF60‐Regulated Isoform Switching of MAZ Modulates Gastric Cancer Cell Migration.

Published in:

Cancer Medicine, 2025, v. 14, n. 11, p. 1, doi. 10.1002/cam4.70977

By:

Xing, Dong;
Zhao, Ting;
Mao, Chenchen;
Han, Zheng;
Cai, Wanxia;
Zhang, Teming;
Mei, Dianfeng;
Xie, Wangkai;
Yu, Jiaye;
Wu, Zhonghan;
Chen, Zhiyuan;
Feng, Shiyu;
Shen, Xian;
Xue, Xiangyang;
Xiang, Dan

Publication type:

Article

A multi-omics prognostic model of cuproptosis affects the prognosis of stomach adenocarcinoma.

Published in:

Clinical Epigenetics, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13148-025-01894-0

By:

Wu, Yinying;
Fan, Yangwei;
Dong, Xuyuan;
Dong, Danfeng;
Shi, Yu;
Wang, Meichen;
Wang, Jia;
Yang, Yuqian;
Yang, Nan;
Ou, Fengyun;
Li, Enxiao

Publication type:

Article

Differential Expression Characteristics of Two Isoforms nr5a2f and nr5a2m in Gonadal Differentiation of Chinese Giant Salamanders, Andrias davidianus.

Published in:

Animals (2076-2615), 2025, v. 15, n. 11, p. 1667, doi. 10.3390/ani15111667

By:

Hu, Dan;
Li, Guanglve;
Zou, Guohua;
Xu, Jiaqing;
Luo, Wenyin;
Hu, Qiaomu

Publication type:

Article

Plant–Fungi Mutualism, Alternative Splicing, and Defense Responses: Balancing Symbiosis and Immunity.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5197, doi. 10.3390/ijms26115197

By:

Zhao, Xiaoqiong;
Muhammad Aslam, Mehtab;
Chen, Moxian;
Das, Debatosh

Publication type:

Article

hnRNPH1: A Multifaceted Regulator in RNA Processing and Disease Pathogenesis.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5159, doi. 10.3390/ijms26115159

By:

Zhu, Lijing;
Yi, Wei;
Zhang, Like;
Qiu, Chenyue;
Sun, Ning;
He, Jingwen;
Feng, Ping;
Wu, Qiong;
Wang, Guangyi;
Wu, Guosheng

Publication type:

Article

Transcript Long‐Read Sequencing Unveils the Molecular Complexity of a Novel ROGDI Splicing Variant in a Tunisian Family With Kohlschütter‐Tönz Syndrome.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 705, doi. 10.1111/cge.14725

By:

Essid, Miriam;
Karoui, Sana;
Zribi, Mouna;
Ben Younes, Thouraya;
Januel, Louis;
Lafont, Estelle;
Labalme, Audrey;
Ben Hafsa, Meriem;
Hun Seo, Go;
Khatrouch, Safa;
Boudabous, Hela;
Ben Chehida, Amel;
Sanlaville, Damien;
Jilani, Houweyda;
Benjemaa, Lamia;
Kraoua, Ichraf;
Lesca, Gaetan;
Chatron, Nicolas

Publication type:

Article

A Splice Site Variant in SENP7 Results in a Severe Form of Arthrogryposis.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 688, doi. 10.1111/cge.14698

By:

Kotecha, Udhaya;
Kim, Euri S.;
Shah, Parth S.;
Shah, Nidhi;
Gupta, Vandana A.

Publication type:

Article

Hereditary Spastic Paraplegia Linked to Abnormal Splicing From an AIMP1 Missense Variant.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 668, doi. 10.1111/cge.14690

By:

Morais, Sara;
Leal Loureiro, José;
Brandão, Eva;
Sequeiros, Jorge;
Stevanin, Giovanni;
Santos, Mariana

Publication type:

Article

The Promise of Environmental RNA Research Beyond mRNA.

Published in:

Molecular Ecology, 2025, v. 34, n. 12, p. 1, doi. 10.1111/mec.17787

By:

Ahi, Ehsan Pashay;
Schenekar, Tamara

Publication type:

Article

MRG15 alternative splicing regulates CDK1 transcriptional activity in mouse cell senescence and myocardial regeneration.

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08309-z

By:

Zhang, Yuan;
Wang, Huayu;
Li, Fang;
Dai, Hui;
Zhang, Ye

Publication type:

Article

Transcriptome Analysis Between Parents and Offspring Revealed the Early Salt Tolerance Mechanism of Rice NGY1.

Published in:

Rice (19398425), 2025, v. 18, n. 1, p. 1, doi. 10.1186/s12284-025-00802-7

By:

Li, Cheng;
Lu, Kai;
Liang, Wen-Hua;
Chen, Tao;
Yao, Shu;
He, Lei;
Wei, Xiao-Dong;
Zhao, Ling;
Zhou, Li-Hui;
Zhao, Chun-Fang;
Zhao, Qing-Yong;
Zhu, Zhen;
Wang, Cai-Lin;
Zhang, Ya-Dong

Publication type:

Article

Deciphering alternative splicing patterns during cell fate transition of fast chemical reprogramming.

Published in:

BMC Biology, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12915-025-02264-1

By:

Lu, Yunkun;
Lin, Kainan;
Ruan, Yeling;
Li, Junjie;
Zhang, Huizhen;
Pan, Tianyuan;
Wang, Qianqian;
Lin, Lianyu;
Feng, Sijie

Publication type:

Article

Analysis of the splicing landscape of the frontal cortex in FTLD-TDP reveals subtype specific patterns and cryptic splicing.

Published in:

Acta Neuropathologica, 2025, v. 149, n. 1, p. 1, doi. 10.1007/s00401-025-02901-7

By:

Faura, Júlia;
Heeman, Bavo;
Pottier, Cyril;
Baker, Matthew C.;
DeJesus-Hernandez, Mariely;
Küçükali, Fahri;
Heiß, Laura;
Wynants, Sarah;
Van den Broeck, Marleen;
De Rijk, Peter;
De Pooter, Tim;
Joris, Geert;
Finch, NiCole A.;
Asmann, Yan;
Strazisar, Mojca;
Murray, Melissa E.;
Petrucelli, Leonard;
Oskarsson, Björn;
Sleegers, Kristel;
Josephs, Keith A.

Publication type:

Article

SNORD88B promotes proliferation and invasion of trophoblast by regulating G3BP1 m6 A modification and alternative splicing.

Published in:

Cellular & Molecular Life Sciences, 2025, v. 82, n. 1, p. 1, doi. 10.1007/s00018-025-05758-x

By:

Lu, Bingfeng;
Li, Qianhui;
Wang, Haiying;
Cheng, Jiachen;
Zhang, Yuran;
Chen, Xi;
Li, Baixue;
Zhao, Yang

Publication type:

Article

Mago nashi controls auxin‐mediated embryo patterning in Arabidopsis by regulating transcript abundance.

Published in:

New Phytologist, 2025, v. 247, n. 1, p. 14, doi. 10.1111/nph.70154

By:

Liu, Liping;
Gong, Wen;
Stöckl, Regina;
Denninger, Philipp;
Schwartz, Uwe;
Johnson, Mark A.;
Dresselhaus, Thomas

Publication type:

Article

Intron Retention, an Orchestrated Program of Gene Expression Regulation.

Published in:

BioEssays, 2025, v. 47, n. 4, p. 1, doi. 10.1002/bies.202400248

By:

Zhou, Hua;
Deng, Xing Wang

Publication type:

Article

Polypyrimidine tract binding proteins PTBP1 and PTBP2 associate with distinct proteins and have distinct post-translational modifications in neuronal nuclear extract.

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0325143

By:

Sullivan, Michael E.;
Edberg, Jacob A.;
Nunez, Christopher I.;
Axelrod, Herbert L.;
Keppetipola, Niroshika M.

Publication type:

Article

Methylation of RBM39 by PRMT6 enhances resistance to Indisulam in non-small cell lung cancer by promoting alternative splicing of proto-oncogenes.

Published in:

PLoS Biology, 2025, v. 23, n. 6, p. 1, doi. 10.1371/journal.pbio.3002846

By:

Zhang, Tongjia;
Wang, Shujie;
Zhou, Yue;
Jiao, Zitao;
Lu, Kejia;
Liu, Xinyi;
Li, Hui;
Jiang, Wei;
Zhang, Xiaowei

Publication type:

Article

Mutations in the microexon splicing regulator srrm4 have minor phenotypic effects on zebrafish neural development Open Access.

Published in:

G3: Genes | Genomes | Genetics, 2025, v. 15, n. 5, p. 1, doi. 10.1093/g3journal/jkaf052

By:

Gupta, Tripti;
Margolin, Gennady;
Burgess, Harold A

Publication type:

Article

Full-length transcriptomes of 25 grassland plant species.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-05280-6

By:

Jiang, Chongyi;
Huang, Zixia;
Meizoso, Cynthia;
Kumpfmüller, Gaby;
Wolf, Jochen B. W.;
Schielzeth, Holger

Publication type:

Article

Transcriptomics data for muscle development in Goats.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-04950-9

By:

Pei, Yu;
Xi, Rongsheng;
Jiang, Wenmeng;
Huang, Peng;
Liu, Mei

Publication type:

Article

Novel insights into the N 6-methyladenosine modification on circRNA in cancer.

Published in:

Frontiers in Oncology, 2025, p. 1, doi. 10.3389/fonc.2025.1554888

By:

Xu, Qingling;
Jia, Yi;
Liu, Ying;
Wu, Bing;
Wang, Jianxun;
Ao, Xiang;
Ding, Wei

Publication type:

Article

Identification and characterization of long non-coding RNA (lncRNA) in wild and semi-wild cucumbers.

Published in:

BMC Plant Biology, 2025, p. 1, doi. 10.1186/s12870-025-06752-y

By:

Xia, Shi-Wei;
Song, Chang-Jiang;
Zheng, Xiao-Fang;
Zhang, Yuan;
Anwar, Wajid;
Dissanayaka, Dissanayakalage D.N.V.;
Zhu, Ping-Zhi;
Liu, Jun-Li;
Lai, Yun-Song

Publication type:

Article

The molecular impact of cigarette smoking resembles aging across tissues.

Published in:

Genome Medicine, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13073-025-01485-x

By:

Ramirez, Jose Miguel;
Ribeiro, Rogério;
Soldatkina, Oleksandra;
Moraes, Athos;
García-Pérez, Raquel;
Oliveros, Winona;
Ferreira, Pedro G.;
Melé, Marta

Publication type:

Article

Genus-Wide Pan-Genome Analysis of Oryza Calcium-Dependent Protein Kinase Genes and Their Related Kinases Highlights the Complexity of Protein Domain Architectures and Expression Dynamics.

Published in:

Plants (2223-7747), 2025, v. 14, n. 10, p. 1542, doi. 10.3390/plants14101542

By:

Shi, Fu;
Li, Li;
Chen, Mingjie;
Chang, Junli;
Tu, Min;
He, Guangyuan;
Li, Yin;
Yang, Guangxiao

Publication type:

Article

Full-Length Transcriptome Analysis of Sesbania cannabina Stem Response to Waterlogging Stress.

Published in:

Agronomy, 2025, v. 15, n. 5, p. 1197, doi. 10.3390/agronomy15051197

By:

He, Tingting;
Sun, Guoli;
He, Sunan;
Zhang, Zhenhua;
Dong, Jing;
Zhu, Xiaomei;
Dai, Jinying;
Wang, Kai;
Xing, Jincheng

Publication type:

Article

Regulatory mechanism of circular RNAs in brain and neurodegenerative diseases.

Published in:

Frontiers in Molecular Neuroscience, 2025, p. 1, doi. 10.3389/fnmol.2025.1507575

By:

Amelimojarad, Mandana;
Amelimojarad, Melika

Publication type:

Article

Functional, microarray and bioinformatics analyses of human papillomavirus E7-specific pathways in cervical carcinogenesis.

Published in:

European Journal of Gynaecological Oncology, 2025, v. 46, n. 5, p. 8, doi. 10.22514/ejgo.2025.061

By:

Nan Qi;
Takeo Minaguchi;
Kaoru Fujieda;
Asami Suto;
Hiroya Itagaki;
Yuri Tenjimbayashi;
Ayumi Shikama;
Nobutaka Tasaka;
Azusa Akiyama;
Sari Nakao;
Toyomi Satoh

Publication type:

Article

Circular RNAs as disease modifiers of complex neurologic disorders.

Published in:

Frontiers in Pharmacology, 2025, p. 1, doi. 10.3389/fphar.2025.1577496

By:

Galli, Veronica;
Vinciguerra, Sara;
Biagioli, Marta;
Morandell, Jasmin

Publication type:

Article

Epigenetic Regulation and Therapeutic Targeting of Alternative Splicing Dysregulation in Cancer.

Published in:

Pharmaceuticals (14248247), 2025, v. 18, n. 5, p. 713, doi. 10.3390/ph18050713

By:

Lei, Yan;
Lai, Maode

Publication type:

Article

Linking expression and function of Drosophila type-I TGF-β receptor baboon isoforms: Multiple roles of BaboA isoform in shaping of the adult central nervous system.

Published in:

PLoS ONE, 2025, v. 20, n. 5, p. 1, doi. 10.1371/journal.pone.0318406

By:

Lee, Gyunghee G.;
Peterson, Aidan J.;
Kim, Myung-Jun;
Shimell, MaryJane;
O'Connor, Michael B.;
Park, Jae H.

Publication type:

Article

DNA Methylation and Alternative Splicing Safeguard Genome and Transcriptome After a Retrotransposition Burst in Arabidopsis thaliana.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4816, doi. 10.3390/ijms26104816

By:

Merkulov, Pavel;
Latypova, Anastasiia;
Tiurin, Kirill;
Serganova, Melania;
Kirov, Ilya

Publication type:

Article

Identification and Functional Analysis of a Key Gene in the CHH Gene Family for Glucose Metabolism in the Pacific White Shrimp Litopenaeus vannamei.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4612, doi. 10.3390/ijms26104612

By:

Zhang, Chengyi;
Zhang, Xiaojun;
Si, Shuqing;
Sun, Mingzhe;
Li, Aixin;
Yuan, Jianbo;
Li, Fuhua

Publication type:

Article

Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1434, doi. 10.1038/nsmb.2699

By:

Lovci, Michael T;
Ghanem, Dana;
Marr, Henry;
Arnold, Justin;
Gee, Sherry;
Parra, Marilyn;
Liang, Tiffany Y;
Stark, Thomas J;
Gehman, Lauren T;
Hoon, Shawn;
Massirer, Katlin B;
Pratt, Gabriel A;
Black, Douglas L;
Gray, Joe W;
Conboy, John G;
Yeo, Gene W

Publication type:

Article

Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 7, p. 719, doi. 10.1038/nsmb.2327

By:

Taggart, Allison J;
DeSimone, Alec M;
Shih, Janice S;
Filloux, Madeleine E;
Fairbrother, William G

Publication type:

Article

Alternative Splicing in Glioblastoma and its Clinical Implication in Outcome Prediction.

Published in:

Neurology India, 2024, v. 72, n. 4, p. 846, doi. 10.4103/neurol-india.ni_1219_21

By:

Zheng, Ping;
Zhang, Xiaoxue;
Ren, Dabin;
Bai, Qingke

Publication type:

Article

Novel deleterious splicing variant in HFM1 causes gametogenesis defect and recurrent implantation failure: concerning the risk of chromosomal abnormalities in embryos.

Published in:

Journal of Assisted Reproduction & Genetics, 2023, v. 40, n. 7, p. 1689, doi. 10.1007/s10815-023-02761-8

By:

Tang, Fei;
Gao, Yang;
Li, KuoKuo;
Tang, DongDong;
Hao, Yan;
Lv, Mingrong;
Wu, Huan;
Cheng, Huiru;
Fei, Jia;
Jin, Zhiping;
Wang, Chao;
Xu, Yuping;
Wei, Zhaolian;
Zhou, Ping;
Zhang, Zhiguo;
He, Xiaojin;
Cao, Yunxia

Publication type:

Article

The effect of LARP7 on gene expression during osteogenesis.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-024-10216-1

By:

Ozisin, M. Samil;
Imren, Gozde;
Aydin, Busra;
Karaosmanoglu, Beren;
Taskiran, Ekim Z.

Publication type:

Article

Mass-spectrometry-based quantitative proteomic analysis reveals that methylglyoxal and carnosine influence oxidative stress and RNA-processing associated proteins in renal proximal tubule epithelial cells.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-024-10190-8

By:

Liu, Lei;
Zhang, Shiqi;
Xu, Juan;
Cao, Yadi;
Cui, Di;
Liu, Chao;
Shen, Bing;
Wu, Yonggui;
Zhang, Qiu

Publication type:

Article

Full-length transcriptome assembly of black amur bream (Megalobrama terminalis) as a reference resource.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-10056-z

By:

Liu, Kai;
Xie, Nan

Publication type:

Article

Decoding the genetic influence of CT60 non-coding polymorphism in CTLA-4 gene and sCTLA-4 biomarker with rheumatoid arthritis in the Indian population.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-09949-w

By:

Shamala, V.;
Asha Devi, S.

Publication type:

Article

Ex vivo disease modelling of Rett syndrome: the transcriptomic and metabolomic implications of direct neuronal conversion.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-09915-6

By:

Karaosmanoglu, Beren;
Imren, Gozde;
Ozisin, M. Samil;
Reçber, Tuba;
Simsek Kiper, Pelin Ozlem;
Haliloglu, Goknur;
Alikaşifoğlu, Mehmet;
Nemutlu, Emirhan;
Taskiran, Ekim Z.;
Utine, Gulen Eda

Publication type:

Article

Transcriptome profiling of longissimus dorsi during different prenatal stages to identify genes involved in intramuscular fat deposition in lean and obese pig breeds.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-023-09088-8

By:

Chen, Jun Feng;
Wang, Jing;
Chai, Jin;
Jin, Wei;
Ren, Qiao Ling;
Ma, Qiang;
Lu, Qing Xia;
Sun, Jia Jie;
Mo, De Lin;
Zhang, Jia Qing;
Xing, Bao Song

Publication type:

Article

LIGHT regulated gene expression in rheumatoid synovial fibroblasts.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-09311-0

By:

Fukuda, Koji;
Miura, Yasushi;
Maeda, Toshihisa;
Hayashi, Shinya;
Kikuchi, Kenichi;
Takashima, Yoshinori;
Matsumoto, Tomoyuki;
Kuroda, Ryosuke

Publication type:

Article

An overview of cdc2‐like kinase 1 (Clk1) inhibitors and their therapeutic indications.

Published in:

Medicinal Research Reviews, 2023, v. 43, n. 2, p. 343, doi. 10.1002/med.21928

By:

ElHady, Ahmed K.;
El‐Gamil, Dalia S.;
Abadi, Ashraf H.;
Abdel‐Halim, Mohammad;
Engel, Matthias

Publication type:

Article

The 5′ untranslated region of the serotonin receptor 2C pre-mRNA generates miRNAs and is expressed in non-neuronal cells.

Published in:

Experimental Brain Research, 2013, v. 230, n. 4, p. 387, doi. 10.1007/s00221-013-3458-8

By:

Zhang, Zhaiyi;
Falaleeva, Marina;
Agranat-Tamir, Lily;
Pages, Amadis;
Eyras, Eduardo;
Sperling, Joseph;
Sperling, Ruth;
Stamm, Stefan

Publication type:

Article

Musashi-2 causes cardiac hypertrophy and heart failure by inducing mitochondrial dysfunction through destabilizing Cluh and Smyd1 mRNA.

Published in:

Basic Research in Cardiology, 2023, v. 118, n. 1, p. 1, doi. 10.1007/s00395-023-01016-y

By:

Singh, Sandhya;
Gaur, Aakash;
Sharma, Rakesh Kumar;
Kumari, Renu;
Prakash, Shakti;
Kumari, Sunaina;
Chaudhary, Ayushi Devendrasingh;
Prasun, Pankaj;
Pant, Priyanka;
Hunkler, Hannah;
Thum, Thomas;
Jagavelu, Kumaravelu;
Bharati, Pragya;
Hanif, Kashif;
Chitkara, Pragya;
Kumar, Shailesh;
Mitra, Kalyan;
Gupta, Shashi Kumar

Publication type:

Article

FUS and METTL3 collaborate to regulate RNA maturation, preventing unfolded protein response and promoting gastric cancer progression.

Published in:

Clinical & Experimental Medicine, 2024, v. 25, n. 1, p. 1, doi. 10.1007/s10238-024-01525-7

By:

Liu, Dongtao;
Ding, Bo;
Liu, Gang;
Yang, Zhijuan

Publication type:

Article

The role of BUD31 in clear cell renal cell carcinoma: prognostic significance, alternative splicing, and tumor immune environment.

Published in:

Clinical & Experimental Medicine, 2024, v. 24, n. 1, p. 1, doi. 10.1007/s10238-024-01451-8

By:

Wu, Xiaoliang;
Fan, Ruixin;
Zhang, Yangjun;
Duan, Chen;
Yao, Xiangyang;
Liu, Kai;
Lin, Dongxu;
Chen, Zhong

Publication type:

Article