Works matching DE "BIOLOGICAL databases"

Results: 1015

Using machine learning to discover DNA metabolism biomarkers that direct prostate cancer treatment.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-11457-1

By:

Abroudi, Ali Shakeri;
Djamali, Melika;
Azizi, Hossein

Publication type:

Article

Rehmannia glutinosa for perimenopausal syndrome in patients with breast cancer: A systematic review and meta-analysis.

Published in:

Saudi Medical Journal, 2025, v. 46, n. 7, p. 735, doi. 10.15537/smj.2025.46.7.20240572

By:

Dejia Kong;
Feixiang Huang;
Wenhua Liu;
Ma Lin;
Zhumei Sheng;
Junmiao Xu

Publication type:

Article

Protozoal populations drive system-wide variation in the rumen microbiome.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-61302-2

By:

Kobel, Carl M.;
Leu, Andy;
Vera-Ponce de León, Arturo;
Øyås, Ove;
Lai, Wanxin;
Altshuler, Ianina;
Hagen, Live H.;
Wollenberg, Rasmus D.;
Søndergaard, Mads T.;
Bakshani, Cassie R.;
Willats, William G. T.;
Nicoll, Laura;
McIlroy, Simon J.;
Hvidsten, Torgeir R.;
Schmidt, Oliver;
Greening, Chris;
Tyson, Gene W.;
Roehe, Rainer;
Aho, Velma T. E.;
Pope, Phillip B.

Publication type:

Article

Computation strategies and clinical applications in neoantigen discovery towards precision cancer immunotherapy.

Published in:

Biomarker Research, 2025, v. 13, n. 1, p. 1, doi. 10.1186/s40364-025-00808-9

By:

Wang, Zhenchang;
Gu, Yu;
Sun, Xiao;
Huang, Hao

Publication type:

Article

Efficacy and safety of short-term spinal cord stimulation and pulsed radiofrequency in the treatment of postherpetic neuralgia: a meta-analysis.

Published in:

Frontiers in Neurology, 2025, p. 1, doi. 10.3389/fneur.2025.1586995

By:

Liu, Zehao;
Weng, Yan;
Liu, Funing;
Jiang, Dezhou;
Wu, Chunmei;
Chen, Yong;
Duan, Xiaoxia;
Zhong, Qing

Publication type:

Article

GBRAP: A Comprehensive Database and Tool for Exploring Genomic Diversity Across All Domains of Life Open Access.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 6, p. 1, doi. 10.1093/molbev/msaf114

By:

Yaddehige, Sachithra Kalhari;
Vischioni, Chiara;
Berselli, Michele;
Alberghini, Leonardo;
Mezzavilla, Massimo;
Bobbo, Tania;
Taccioli, Cristian

Publication type:

Article

Use of the BIOGROUP<sup>®</sup> French laboratories database to conduct CKD observational studies: a pilot EPI-CKD1 study.

Published in:

Clinical Chemistry & Laboratory Medicine, 2025, v. 63, n. 8, p. 1610, doi. 10.1515/cclm-2024-1399

By:

Visseaux, Claire;
Pénaranda, Guillaume;
Conte, Cécile;
Raguideau, Fanny;
L'hirondel, Julien;
Vignault, Claire;
Zaoui, Philippe;
Sebaoun-Rivière, Isabelle

Publication type:

Article

Biocultural diversity: a Mongolian case study.

Published in:

Ecology & Society, 2019, v. 24, n. 4, p. 1, doi. 10.5751/ES-11207-240427

By:

Seele, Barbara C.;
Esler, Karen J.;
Cunningham, Anthony B.

Publication type:

Article

The effectiveness of PC6 acupuncture in the prevention of postoperative nausea and vomiting in children: A systematic review and meta‐analysis.

Published in:

Pediatric Anesthesia, 2020, v. 30, n. 5, p. 552, doi. 10.1111/pan.13860

By:

Zhang, Yi;
Zhang, Chang;
Yan, Meihua;
Wang, Ningyu;
Liu, Jinfeng;
Wu, Anshi;
Veyckemans, Francis

Publication type:

Article

e-Recruitment, gender discrimination, and organizational results of listed companies on the Spanish Stock Exchange.

Published in:

Revista de Psicologia del Trabajo y de Las Organizaciones, 2015, v. 31, n. 3, p. 155, doi. 10.1016/j.rpto.2015.06.003

By:

García-Izquierdo, Antonio L.;
Ramos-Villagrasa, Pedro J.;
Castaño, Ana M.

Publication type:

Article

Identification and species-typing of wood rotting fungi using melting curve analysis.

Published in:

Journal of Wood Science, 2013, v. 59, n. 5, p. 432, doi. 10.1007/s10086-013-1349-z

By:

Horisawa, Sakae;
Sakuma, Yoh;
Doi, Shuichi

Publication type:

Article

QuantiFERON®-TB Gold In-Tube test can be used for screening latent tuberculosis before biological treatment in a Bacille Calmette-Guérin (BCG)-vaccinated country: the HUR-BIO single-center real-life results.

Published in:

Clinical Rheumatology, 2021, v. 40, n. 5, p. 2027, doi. 10.1007/s10067-020-05443-3

By:

Seyhoglu, Emrah;
Uyaroğlu, Oğuz Abdullah;
Erden, Abdulsamet;
Kilic, Levent;
Karadag, Omer;
Akdogan, Ali;
Bilgen, Sule Apras;
Ertenli, Ihsan;
Kiraz, Sedat;
Kalyoncu, Umut

Publication type:

Article

Change in PsAID-12 scores in patients continuing or discontinuing anti-TNF treatments in psoriatic arthritis: results from the HUR-BIO biologic registry.

Published in:

Clinical Rheumatology, 2019, v. 38, n. 4, p. 1187, doi. 10.1007/s10067-019-04426-3

By:

Kalyoncu, Umut;
Kiraz, Sedat;
Bilgen, Sule Apras;
Karadag, Omer;
Akdogan, Ali;
Kilic, Levent;
Erden, Abdulsamet;
Armagan, Berkan;
Sari, Alper;
Ertenli, Ihsan

Publication type:

Article

Esophageal atresia in patients with anorectal malformations.

Published in:

Pediatric Surgery International, 2014, v. 30, n. 8, p. 767, doi. 10.1007/s00383-014-3531-9

By:

Fernandez, Emilio;
Bischoff, Andrea;
Dickie, Belinda;
Frischer, Jason;
Hall, Jennifer;
Peña, Alberto

Publication type:

Article

Characterization of ( R)-selective amine transaminases identified by in silico motif sequence blast.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 6, p. 2613, doi. 10.1007/s00253-014-6056-1

By:

Jiang, Jinju;
Chen, Xi;
Zhang, Dalong;
Wu, Qiaqing;
Zhu, Dunming

Publication type:

Article

Identification and characterization of endo-β-N-acetylglucosaminidase from methylotrophic yeast Ogataea minuta†.

Published in:

Glycobiology, 2013, v. 23, n. 6, p. 736, doi. 10.1093/glycob/cwt012

By:

Murakami, Satoshi;
Takaoka, Yuki;
Ashida, Hisashi;
Yamamoto, Kenji;
Narimatsu, Hisashi;
Chiba, Yasunori

Publication type:

Article

Integrative analysis of mitochondrial-related gene profiling identifies prognostic clusters and drug resistance mechanisms in low-grade glioma.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02201-2

By:

Chang, Xiaozan;
Huang, Yingxuan;
Qu, Ying;
Guo, Yu;
Fan, Wenwen;
Zhen, Haining

Publication type:

Article

Comparative analysis of machine learning algorithms for biomedical text document classification: A case study on cancer-related publications.

Published in:

Medicine Science, 2024, v. 13, n. 1, p. 171, doi. 10.5455/medscience.2023.10.209

By:

Kucuk, Ekrem;
Cicek, Ipek Balikci;
Kucukakcali, Zeynep;
Yetis, Cihan

Publication type:

Article

A NEW APPROACH IN DRUG DISCOVERY: NETWORK PHARMACOLOGY.

Published in:

Journal of Research in Pharmacy, 2023, v. 27, p. 6, doi. 10.29228/jrp.454

By:

DİKER, Neziha Yagmur;
KUTLUAY, Vahap Murat

Publication type:

Article

Does obesity affect treatment response to secukinumab and survival in ankylosing spondylitis? Real-life data from the TURKBIO Registry.

Published in:

Modern Rheumatology, 2024, v. 34, n. 3, p. 584, doi. 10.1093/mr/road061

By:

Karaka, Ali;
Gulle, Semih;
Can, Gerçek;
Dalkilic, Ediz;
Akar, Servet;
Koca, Suleyman Serdar;
Pehlivan, Yavuz;
Senel, Soner;
Tufan, Abdurrahman;
Ozturk, Mehmet Akif;
Yilmaz, Sema;
Yazici, Ayten;
Cefle, Ayse;
Inel, Tuba Yüce;
Erez, Yesim;
Sari, Ismail;
Birlik, Merih;
Direskeneli, Haner;
Akkoc, Nurullah;
Onen, Fatos

Publication type:

Article

Efficiency and uncertainties in micro- and mesoscale habitat modelling in large rivers.

Published in:

Hydrobiologia, 2014, v. 729, n. 1, p. 33, doi. 10.1007/s10750-012-1429-x

By:

Habersack, H.;
Tritthart, M.;
Liedermann, M.;
Hauer, C.

Publication type:

Article

Efficacy and Safety of CT-P13 as First- and Second-Line Treatment in Patients with Ankylosing Spondylitis.

Published in:

Journal of Clinical Medicine, 2024, v. 13, n. 23, p. 7266, doi. 10.3390/jcm13237266

By:

Uslu, Sadettin;
Gülle, Semih;
Sen, Gercek;
Capar, Sedat;
Senel, Soner;
Dalkılıc, Ediz;
Akar, Servet;
Koca, Süleyman Serdar;
Tufan, Abdurrahman;
Yazici, Ayten;
Yilmaz, Sema;
Inanc, Nevsun;
Birlik, Merih;
Solmaz, Dilek;
Cefle, Ayse;
Goker, Berna;
Direskeneli, Haner;
Yolbas, Servet;
Steen Krogh, Niels;
Yilmaz, Neslihan

Publication type:

Article

miR-181a-5p Inhibits Pyroptosis in Sepsis-Induced Acute Kidney Injury through Downregulation of NEK7.

Published in:

2022

By:

Zhang, Meng;
Zhi, Deyuan;
Lin, Jin;
Liu, Pei;
Wang, Yajun;
Duan, Meili

Publication type:

journal article

Reliability and relevance evaluations of REACH data.

Published in:

Toxicology Research, 2019, v. 8, n. 1, p. 46, doi. 10.1039/c8tx00216a

By:

Ingre-Khans, Ellen;
Ågerstrand, Marlene;
Beronius, Anna;
Rudén, Christina

Publication type:

Article

Making the most of survey data: Incorporating age uncertainty when fitting growth parameters.

Published in:

Ecology & Evolution (20457758), 2017, v. 7, n. 17, p. 7058, doi. 10.1002/ece3.3280

By:

Spence, Michael A.;
Turtle, Alan J.

Publication type:

Article

Comparison of photo-matching algorithms commonly used for photographic capture-recapture studies.

Published in:

Ecology & Evolution (20457758), 2017, v. 7, n. 15, p. 5861, doi. 10.1002/ece3.3140

By:

Matthé, Maximilian;
Sannolo, Marco;
Winiarski, Kristopher;
Spitzen ‐ van der Sluijs, Annemarieke;
Goedbloed, Daniel;
Steinfartz, Sebastian;
Stachow, Ulrich

Publication type:

Article

Effect of marker choice and thermal cycling protocol on zooplankton DNA metabarcoding studies.

Published in:

Ecology & Evolution (20457758), 2017, v. 7, n. 3, p. 873, doi. 10.1002/ece3.2667

By:

Clarke, Laurence J.;
Beard, Jason M.;
Swadling, Kerrie M.;
Deagle, Bruce E.

Publication type:

Article

Effect of oral alpha-lipoic acid (ALA) on sperm parameters: a systematic review and meta-analysis.

Published in:

Basic & Clinical Andrology, 2022, v. 32, n. 1, p. 1, doi. 10.1186/s12610-022-00173-9

By:

Dong, Liang;
Yang, Fang;
Li, Junjun;
Li, Yulin;
Yu, Xujun;
Zhang, Xiaojin

Publication type:

Article

Contrastive learning and mixture of experts enables precise vector embeddings in biological databases.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-98185-8

By:

Hallee, Logan;
Kapur, Rohan;
Patel, Arjun;
Gleghorn, Jason P.;
Khomtchouk, Bohdan B.

Publication type:

Article

Parenclitic networks: uncovering new functions in biological data.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep05112

By:

Zanin, Massimiliano;
Alcazar, Joaquín Medina;
Carbajosa, Jesus Vicente;
Gomez Paez, Marcela;
Papo, David;
Sousa, Pedro;
Menasalvas, Ernestina;
Boccaletti, Stefano

Publication type:

Article

ARA: a flexible pipeline for automated exploration of NCBI SRA datasets.

Published in:

GigaScience, 2023, v. 12, n. 1, p. 1, doi. 10.1093/gigascience/giad067

By:

Maurya, Anand;
Szymanski, Maciej;
Karlowski, Wojciech M

Publication type:

Article

Transcriptome annotation in the cloud: complexity, best practices, and cost.

Published in:

GigaScience, 2021, v. 10, n. 2, p. 1, doi. 10.1093/gigascience/giaa163

By:

Alvarez, Roberto Vera;
Mariño-Ramírez, Leonardo;
Landsman, David

Publication type:

Article

Machado: Open source genomics data integration framework.

Published in:

GigaScience, 2020, v. 9, n. 9, p. 1, doi. 10.1093/gigascience/giaa097

By:

Mudadu, Mauricio de Alvarenga;
Zerlotini, Adhemar

Publication type:

Article

Microbiome Learning Repo (ML Repo): A public repository of microbiome regression and classification tasks.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz042

By:

Vangay, Pajau;
Hillmann, Benjamin M;
Knights, Dan

Publication type:

Article

The efficacy and safety of panax quinquefolius saponin for heart failure: a systematic review and meta-analysis.

Published in:

2025

By:

Wang, Jing;
Chang, Tianying;
Liang, Zheng;
Cui, Yingzi;
Wang, Xiaodan;
Wang, Lisha;
Jin, Hongguang

Publication type:

Literature Review

Multi-omics approaches to deciphering complex pathological mechanisms of migraine: a systematic review.

Published in:

2025

By:

Liu, Jiaojiao;
Ren, Qiaosheng;
Du, Boxuan;
Liu, Xian;
An, Yuqiu;
Zhang, Peichi;
Li, Lexi;
Liu, Zhenhong;
Cao, Kegang

Publication type:

Literature Review

Second-line therapy for patients with steroid-refractory aGVHD: systematic review and meta-analysis of randomized controlled trials.

Published in:

Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1211171

By:

Chengxin Luo;
Xiangtao Huang;
Ling Wei;
Guixian Wu;
Yarui Huang;
Yaqun Ding;
Zhen Huang;
Jieping Chen;
Xi Li;
Yunding Zou;
Shuangnian Xu

Publication type:

Article

Classifying Breast Cancer Molecular Subtypes by Using Deep Clustering Approach.

Published in:

Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.553587

By:

Rohani, Narjes;
Eslahchi, Changiz

Publication type:

Article

Editorial: Artificial Intelligence Bioinformatics: Development and Application of Tools for Omics and Inter-Omics Studies.

Published in:

2020

By:

Chicco, Davide;
Heider, Dominik;
Facchiano, Angelo

Publication type:

Editorial

ALTERNATIVE TO ANIMAL STUDY: CURRENT STATUS & FUTURE PERSPECTIVE.

Published in:

International Journal of Pharmacy & Life Sciences, 2019, v. 10, n. 6, p. 36

By:

Sharma, Shailja;
Jain, Diksha;
Tagde, Priti

Publication type:

Article

Chemoinformatic Analysis of Isothiocyanates: Their Impact in Nature and Medicine.

Published in:

Molecular Informatics, 2021, v. 40, n. 11, p. 1, doi. 10.1002/minf.202100172

By:

Guerrero‐Alonso, Araceli;
Antunez‐Mojica, Mayra;
Medina‐Franco, José L.

Publication type:

Article

Identification of the Apoptosis and Autophagy Bi‐functional Proteins.

Published in:

Molecular Informatics, 2020, v. 39, n. 3, p. 1, doi. 10.1002/minf.201900008

By:

Wang, Peiran;
Zhang, Zhichao

Publication type:

Article

Towards a national bio-environmental data facility: experiences from the Atlas of Living Australia.

Published in:

International Journal of Geographical Information Science, 2016, v. 30, n. 1, p. 108, doi. 10.1080/13658816.2015.1077962

By:

Belbin, Lee;
Williams, Kristen J

Publication type:

Article

In Silico Identification of Cassava Genome-Encoded MicroRNAs with Predicted Potential for Targeting the ICMV-Kerala Begomoviral Pathogen of Cassava.

Published in:

Viruses (1999-4915), 2023, v. 15, n. 2, p. 486, doi. 10.3390/v15020486

By:

Ashraf, Muhammad Aleem;
Ali, Babar;
Brown, Judith K.;
Shahid, Imran;
Yu, Naitong

Publication type:

Article

Bacterial Virus Ontology; Coordinating across Databases.

Published in:

Viruses (1999-4915), 2017, v. 9, n. 6, p. 126, doi. 10.3390/v9060126

By:

Hulo, Chantal;
Masson, Patrick;
Toussaint, Ariane;
Osumi-Sutherland, David;
de Castro, Edouard;
Auchincloss, Andrea H.;
Poux, Sylvain;
Bougueleret, Lydie;
Xenarios, Ioannis;
Le Mercier, Philippe

Publication type:

Article

DASPfind: new efficient method to predict drug-target interactions.

Published in:

Journal of Cheminformatics, 2016, v. 8, n. 1, p. 1, doi. 10.1186/s13321-016-0128-4

By:

Ba-alawi, Wail;
Soufan, Othman;
Essack, Magbubah;
Kalnis, Panos;
Bajic, Vladimir B.

Publication type:

Article

The BioDICE Taverna plugin for clustering and visualization of biological data: a workflow for molecular compounds exploration.

Published in:

Journal of Cheminformatics, 2014, v. 6, n. 1, p. 1, doi. 10.1186/1758-2946-6-24

By:

Fiannaca, Antonino;
La Rosa, Massimo;
Di Fatta, Giuseppe;
Gaglio, Salvatore;
Rizzo, Riccardo;
Urso, Alfonso

Publication type:

Article

Prediction of novel drug indications using network driven biological data prioritization and integration.

Published in:

Journal of Cheminformatics, 2014, v. 6, n. 1, p. 1, doi. 10.1186/1758-2946-6-1

By:

Qabaja, Ala;
Alshalalfa, Mohammed;
Alanazi, Eisa;
Alhajj, Reda

Publication type:

Article

Genome data of four Pythium insidiosum strains from the phylogenetically-distinct clades I, II, and III.

Published in:

BMC Research Notes, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13104-021-05610-y

By:

Krajaejun, Theerapong;
Kittichotirat, Weerayuth;
Patumcharoenpol, Preecha;
Rujirawat, Thidarat;
Lohnoo, Tassanee;
Yingyong, Wanta

Publication type:

Article

Roadmap to the study of gene and protein phylogeny and evolution—A practical guide.

Published in:

PLoS ONE, 2023, v. 18, n. 2, p. 1, doi. 10.1371/journal.pone.0279597

By:

Jacques, Florian;
Bolivar, Paulina;
Pietras, Kristian;
Hammarlund, Emma U.

Publication type:

Article