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CHARACTERIZATION OF POLYMORPHIC MICROSATELLITES FOR THE INVASIVE GRASS MICROSTEGIUM VIMINEUM (POACEAE).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e56, doi. 10.3732/ajb.1100337
By:
- NOVY, ARI;
- LUKE FLORY, S.;
- HONIG, JOSHUA A.;
- BONOS, STACY;
- HARTMAN, JEAN MARIE
Publication type:
Article
DEVELOPMENT OF MICROSATELLITE MARKERS IN HETEROSTYLOUS HEDYOTIS CHRYSOTRICHA (RUBIACEAE).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e43, doi. 10.3732/ajb.1100304
By:
- NA YUAN 2,3;
- YI SUN 2,3;
- KOH NAKAMURA 4;
- YING-XIONG QIU 2,3
Publication type:
Article
NUCLEAR MICROSATELLITE LOCI FOR ARABIDOPSIS HALLERI (BRASSICACEAE), A MODEL SPECIES TO STUDY PLANT ADAPTATION TO HEAVY METALS.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e49, doi. 10.3732/ajb.1100320
By:
- GODÉ, CÉCILE;
- DECOMBEIX, ISABELLE;
- KOSTECKA, ALICJA;
- WASOWICZ, PAWEL;
- PAUWELS, MAXIME;
- COURSEAUX, ADELINE;
- SAUMITOU-LAPRADE, PIERRE
Publication type:
Article
MICROSATELLITE MARKER DEVELOPMENT FOR THE THREATENED ORCHID MASDEVALLIA SOLOMONII (ORCHIDACEAE).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e66, doi. 10.3732/ajb.1100364
By:
- LÓPEZ-ROBERTS, M. CRISTINA;
- ALMEIDA, PAULO R. M.;
- OLIVEIRA, EDDY J. F.;
- VAN DEN BERG, C ÁSSIO
Publication type:
Article
ISOLATION AND CHARACTERIZATION OF NOVEL MICROSATELLITE MARKERS FOR AVENA SATIVA (POACEAE) (OAT).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e69, doi. 10.3732/ajb.1100404
By:
- BIN WU;
- ZONGWEN ZHANG;
- LINGYUN CHEN;
- MINGGAO HE
Publication type:
Article
DEVELOPMENT OF 15 NOVEL MICROSATELLITE MARKERS FROM CELLULOSE SYNTHASE GENES IN POPULUS TOMENTOSA (SALICACEAE).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e46, doi. 10.3732/ajb.1100308
By:
- QING-ZHANG DU;
- DE-QIANG ZHANG;
- BAI-LIAN LI
Publication type:
Article
Identification and characterization of microsatellite loci in the rush Juncus effusus (Juncaceae).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e53, doi. 10.3732/ajb.1100322
By:
- Michalski, Stefan G.;
- Durka, Walter
Publication type:
Article
DEVELOPMENT OF EST-SSR MARKERS FOR ELAEOCARPUS PHOTINIIFOLIA (ELAEOCARPACEAE), AN ENDEMIC TAXON OF THE BONIN ISLANDS.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e84, doi. 10.3732/ajb.1100391
By:
- KYOKO SUGAI;
- SUZUKI SETSUKO;
- KENTARO UCHIYAMA;
- NORIAKI MURAKAMI;
- HIDETOSHI KATO;
- HIROSHI YOSHIMARU
Publication type:
Article
IDENTIFICATION AND DEVELOPMENT OF POLYMORPHIC EST-SSR MARKERS BY SEQUENCE ALIGNMENT IN PEPPER, CAPSICUM ANNUUM (SOLANACEAE).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e59, doi. 10.3732/ajb.1100347
By:
- QIUSHENG KONG;
- GUANGPING ZHANG;
- WENCHAO CHEN;
- ZHUQING ZHANG;
- XUEXIAO ZOU
Publication type:
Article
DEVELOPMENT OF EIGHT MITOCHONDRIAL MARKERS FOR FUNARIACEAE (MUSCI) AND THEIR AMPLIFICATION SUCCESS IN OTHER MOSSES.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e62, doi. 10.3732/ajb.1100402
By:
- YANG LIU;
- MOSKWA, NICHOLAS L.;
- GOFFINET, BERNARD
Publication type:
Article
DEVELOPMENT OF NOVEL LOW-COPY NUCLEAR MARKERS FOR HIERACIINAE (ASTERACEAE) AND THEIR PERSPECTIVE FOR OTHER TRIBES.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e74, doi. 10.3732/ajb.1100416
By:
- KAROL KRAK;
- INÉS Á LVAREZ;
- PETRA CAKLOVÁ;
- ANDREA COSTA;
- JINDŘICH CHRTEK;
- JUDITH FEHRER
Publication type:
Article
DEVELOPMENT AND CHARACTERIZATION OF MICROSATELLITE LOCI FOR TWO CARIBBEAN HELICONIA (HELICONIACEAE: H. BIHAI AND H. CARIBAEA.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e81, doi. 10.3732/ajb.1100386
By:
- GOWDA, VINITA;
- ERICKSON, DAVID L.;
- JOHN KRESS, W.
Publication type:
Article
DEVELOPMENT OF MICROSATELLITE MARKERS FOR THE NEOTROPICAL TREE SPECIES DIPTERYX ALATA (FABACEAE).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e72, doi. 10.3732/ajb.1100377
By:
- SOARES, THANNYA NASCIMENTO;
- MELO, DAYANE BORGES;
- RESENDE, LUCILEIDE VILELA;
- VIANELLO, ROSANA PEREIRA;
- CHAVES, LÁZARO JOSÉ;
- COLLEVATTI, ROSANE GARCIA;
- DE CAMPOS TELLES, MARIANA PIRES
Publication type:
Article
ICROSATELLITE PRIMERS IN THE CHINESE DOVE TREE, DAVIDIA INVOLUCRATA (CORNACEAE), A RELIC SPECIES OF THE TERTIARY.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. e78, doi. 10.3732/ajb.1100365
By:
- ZUOZHOU LI;
- CHUANHUA WANG;
- YANHONG LIU;
- JUNQING LI
Publication type:
Article
GENOMICS OF GENE BANKS: A CASE STUDY IN RICE.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 407, doi. 10.3732/ajb.1100385
By:
- McCouch, Susan R.;
- McNally, Kenneth L.;
- Wen Wang;
- Hamilton, Ruaraidh Sackville
Publication type:
Article
PHYLOGENOMIC ANALYSIS OF TRANSCRIPTOME DATA ELUCIDATES CO-OCCURRENCE OF A PALEOPOLYPLOID EVENT AND THE ORIGIN OF BIMODAL KARYOTYPES IN AGAVOIDEAE (ASPARAGACEA).
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 397, doi. 10.3732/ajb.1100537
By:
- McKain, Michael R.;
- Wickett, Norman;
- Yeting Zhang;
- Ayyampalayam, Saravanaraj;
- McCombie, W. Richard;
- Chase, Mark W.;
- Pires, J. Chris;
- DePamphilis, Claude W.;
- Leebens-Mack, Jim
Publication type:
Article
A COMPARATIVE TRANSCRIPTOMIC STUDY OF AN ALLOTETRAPLOID AND ITS DIPLOID PROGENITORS ILLUSTRATES THE UNIQUE ADVANTAGES AND CHALLENGES OF RNA-SEQ IN PLANT SPECIES.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 383, doi. 10.3732/ajb.1100312
By:
- Ilut, Daniel C.;
- Coate, Jeremy E.;
- Luciano, Amelia K.;
- Owens, Thomas G.;
- May, Gregory D.;
- Farmer, Andrew;
- Doyle, Jeff J.
Publication type:
Article
NEXT-GENERATION SEQUENCING AND GENOME EVOLUTION IN ALLOPOLYPLOIDS.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 372, doi. 10.3732/ajb.1100395
By:
- Buggs, Richard J. A.;
- Renny-Byfield, Simon;
- Chester, Michael;
- Jordon-Thaden, Ingrid E.;
- Viccini, Lyderson Facio;
- Chamala, Srikar;
- Leitch, Andrew R.;
- Schnable, Patrick S.;
- Barbazuk, W. Bradley;
- Soltis, Pamela S.;
- Soltis, Douglas E.
Publication type:
Article
NEXT-GENERATION SEQUENCING APPLICATIONS FOR WHEAT CROP IMPROVEMENT.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 365, doi. 10.3732/ajb.1100309
By:
- Berkman, Paul J.;
- Kaitao Lai;
- Lorenc, Michał T.;
- Edwards, David
Publication type:
Article
NAVIGATING THE TIP OF THE GENOMIC ICEBERG; NEXT-GENERATION SEQUENCING FOR PLANT SYSTEMATICS.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 349, doi. 10.3732/ajb.1100335
By:
- Straub, Shannon C. K.;
- Parks, Matthew;
- Weitemier, Kevin;
- Fishbein, Mark;
- Cronn, Richard C.;
- Liston, Aaron
Publication type:
Article
QUALITY AND QUANTITY OF DATA RECOVERED FROM MASSIVELY PARALLEL SEQUENCING: EXAMPLES IN ASPARAGALES AND POACEAE.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 330, doi. 10.3732/ajb.1100491
By:
- Steele, E. Roxanne;
- Hertweck, Kate L.;
- Mayfield, Dustin;
- McKain, Michael R.;
- Leebens-Mack, James;
- Pires, J. Chris
Publication type:
Article
ULTRA-BARCODING IN CACAO (THEOBROMA SPP.; MALVACEAE) USING WHOLE CHLOROPLAST GENOMES AND NUCLEAR RIBOSOMAL DNA.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 320, doi. 10.3732/ajb.1100570
By:
- Kane, Nolan;
- Sveinsson, Saemundur;
- Dempewolf, Hannes;
- Ji Yong Yang;
- Dapeng Zhang;
- Engels, Johannes M. M.;
- Cronk, Quentin
Publication type:
Article
TARGETED SEQUENCE CAPTURE AS A POWERFUL TOOL FOR EVOLUTIONARY ANALYSIS.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 312, doi. 10.3732/ajb.1100323
By:
- Grover, Corrinne E.;
- Salmon, Armel;
- Wendel, Jonathan F.
Publication type:
Article
TARGETED ENRICHMENT STRATEGIES FOR NEXT-GENERATION PLANT BIOLOGY.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 291, doi. 10.3732/ajb.1100356
By:
- Cronn, Richard;
- Knaus, Brian J.;
- Liston, Aaron;
- Maughan, Peter J.;
- Parks, Matthew;
- Syring, John V.;
- Udall, Joshua
Publication type:
Article
GENOME-WIDE MAPPING OF TRANSCRIPTION FACTOR BINDING REVEALS DEVELOPMENTAL PROCESS INTEGRATION AND A FRESH LOOK AT EVOLUTIONARY DYNAMICS.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 277, doi. 10.3732/ajb.1100333
By:
- Yant, Levi
Publication type:
Article
STRATEGIES FOR TRANSCRIPTOME ANALYSIS IN NONMODEL PLANTS.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 267, doi. 10.3732/ajb.1100334
By:
- Ward, Judson A.;
- Ponnala, Lalit;
- Weber, Courtney A.
Publication type:
Article
DESIGNING A TRANSCRIPTOME NEXT-GENERATION SEQUENCING PROJECT FOR A NONMODEL PLANT SPECIES.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 257, doi. 10.3732/ajb.1100292
By:
- Strickler, Susan R.;
- Bombarely, Aureliano;
- Mueller, Lukas A.
Publication type:
Article
A COMPARISON OF STATISTICAL METHODS FOR DETECTING DIFFERENTIALLY EXPRESSED GENES FROM RNA-SEQ DATA.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 248, doi. 10.3732/ajb.1100340
By:
- Kvam, Vanessa M.;
- Peng Liu;
- Yaqing Si
Publication type:
Article
NEXT-GENERATION SEQUENCING-BASED TRANSCRIPTOMIC AND PROTEOMIC ANALYSIS OF THE COMMON REED, PHRAGMITES AUSTRALIS (POACEAE), REVEALS GENES INVOLVED IN INVASIVENESS AND RHIZOME SPECIFICITY.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 232, doi. 10.3732/ajb.1100429
By:
- Ruifeng He;
- Min-Jeong Kim;
- Nelson, William;
- Balbuena, Tiago S.;
- Kim, Ryan;
- Kramer, Robin;
- Crow, John A.;
- May, Greg D.;
- Thelen, Jay J.;
- Soderlund, Carol A.;
- Gang, David R.
Publication type:
Article
MINING ARABIDOPSIS THALIANA RNA-SEQ DATA WITH INTEGRATED GENOME BROWSER REVEALS STRESS-INDUCED ALTERNATIVE SPLICING OF THE PUTATIVE SPLICING REGULATOR SR45A.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 219, doi. 10.3732/ajb.1100355
By:
- Gulledge, Alyssa A.;
- Roberts, April D.;
- Vora, Hiral;
- Patel, Ketan;
- Loraine, Ann E.
Publication type:
Article
GENOMICS OF COMPOSITAE WEEDS: EST LIBRARIES, MICROARRAYS, AND EVIDENCE OF INTROGRESSION.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 209, doi. 10.3732/ajb.1100313
By:
- Zhao Lai;
- Kane, Nolan C.;
- Kozik, Alex;
- Hodgins, Kathryn A.;
- Dlugosch, Katrina M.;
- Barker, Michael S.;
- Matvienko, Marta;
- Qian Yu;
- Turner, Kathryn G.;
- Pearl, Stephanie Anne;
- Bell, Graeme D. M.;
- Yi Zou;
- Grassa, Chris;
- Guggisberg, Alessla;
- Adams, Keith L.;
- Anderson, James V.;
- Horvath, David P.;
- Kesseli, Richard V.;
- Burke, John M.;
- Michelmore, Richard W.
Publication type:
Article
USING NEXT-GENERATION SEQUENCING APPROACHES TO ISOLATE SIMPLE SEQUENCE REPEAT (SSR) LOCI IN THE PLANT SCIENCES.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 193, doi. 10.3732/ajb.1100394
By:
- Zalapa, Juan E.;
- Cuevas, Hugo;
- Huayu Zhu;
- Steffan, Shawn;
- Senalik, Douglas;
- Zeldin, Eric;
- McCown, Brent;
- Harbut, Rebecca;
- Simon, Philipp
Publication type:
Article
COVERAGE-BASED CONSENSUS CALLING (CBCC) OF SHORT SEQUENCE READS AND COMPARISON OF CBCC RESULTS TO IDENTIFY SNPs IN CHICKPEA (CICER ARIETINUM; FABACEAE), A CROP SPECIES WITHOUT A REFERENCE GENOME.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 186, doi. 10.3732/ajb.1100419
By:
- Azam, Sarwar;
- Thakur, Vivek;
- Ruperao, Pradeep;
- Shah, Trushar;
- Balaji, Jayashree;
- Amindala, Bhanuprakash;
- Farmer, Andrew D.;
- Studholme, David J.;
- May, Gregory D.;
- Edwards, David;
- Jones, Jonathan O. G.;
- Varshney, Rajeev K.
Publication type:
Article
APPLICATIONS OF NEXT-GENERATION SEQUENCING IN PLANT BIOLOGY.
Published in:
American Journal of Botany, 2012, v. 99, n. 2, p. 175, doi. 10.3732/ajb.1200020
By:
- Egan, Ashley N.;
- Schlueter, Jessica;
- Spooner, David M.
Publication type:
Article

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