Works matching DE "RNA-RNA interactions"
Results: 65
Translational arrest by a prokaryotic signal recognition particle is mediated by RNA interactions.
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- Nature Structural & Molecular Biology, 2015, v. 22, n. 10, p. 767, doi. 10.1038/nsmb.3086
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- Article
Towards Long-Range RNA Structure Prediction in Eukaryotic Genes.
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- Genes, 2018, v. 9, n. 6, p. 302, doi. 10.3390/genes9060302
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- Article
Neighboring Gene Regulation by Antisense Long Non-Coding RNAs.
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- International Journal of Molecular Sciences, 2015, v. 16, n. 2, p. 3251, doi. 10.3390/ijms16023251
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- Article
Hunting the Needle in the Haystack: A Guide to Obtain Biologically Meaningful MicroRNA Targets.
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- International Journal of Molecular Sciences, 2014, v. 15, n. 11, p. 20266, doi. 10.3390/ijms151120266
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- Article
Affinity Purification of Binding miRNAs for Messenger RNA Fused with a Common Tag.
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- International Journal of Molecular Sciences, 2014, v. 15, n. 8, p. 14753, doi. 10.3390/ijms150814753
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- Article
Molecular Analysis of RNA-RNA Interactions between 5' and 3' Untranslated Regions during the Initiation of Translation of a Cardiovirulent and a Live-Attenuated Coxsackievirus B3 Strains.
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- International Journal of Molecular Sciences, 2013, v. 14, n. 3, p. 4525, doi. 10.3390/ijms14034525
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- Article
Limited Agreement of Independent RNAi Screens for Virus-Required Host Genes Owes More to False-Negative than False-Positive Factors.
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- PLoS Computational Biology, 2013, v. 9, n. 9, p. 1, doi. 10.1371/journal.pcbi.1003235
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- Article
Viral RNA switch mediates the dynamic control of flavivirus replicase recruitment by genome cyclization.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.17636
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- Article
A Comparative Study on Two GNRA-Tetraloop Receptors: 11-nt and IC3 Motifs1.
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- Journal of Biochemistry, 2001, v. 130, n. 2, p. 251, doi. 10.1093/oxfordjournals.jbchem.a002979
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- Article
Detecting RNA-RNA interactions in E. coli using a modified CLASH method.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3725-3
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- Article
RRDB: a comprehensive and non-redundant benchmark for RNA-RNA docking and scoring.
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- Bioinformatics, 2018, v. 34, n. 3, p. 453, doi. 10.1093/bioinformatics/btx615
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- Article
RIblast: an ultrafast RNA-RNA interaction prediction system based on a seed-and-extension approach.
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- Bioinformatics, 2017, v. 33, n. 17, p. 2666, doi. 10.1093/bioinformatics/btx287
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- Article
A comprehensive benchmark of RNA-RNA interaction prediction tools for all domains of life.
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- Bioinformatics, 2017, v. 33, n. 7, p. 988, doi. 10.1093/bioinformatics/btw728
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- Publication type:
- Article
An accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data.
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- Bioinformatics, 2017, v. 33, n. 2, p. 202, doi. 10.1093/bioinformatics/btw603
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- Publication type:
- Article
Prediction of conserved long-range RNA-RNA interactions in full viral genomes.
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- Bioinformatics, 2016, v. 32, n. 19, p. 2928, doi. 10.1093/bioinformatics/btw323
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- Publication type:
- Article
AccessFold: predicting RNA-RNA interactions with consideration for competing self-structure.
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- Bioinformatics, 2016, v. 32, n. 7, p. 1033, doi. 10.1093/bioinformatics/btv682
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- Publication type:
- Article
RIsearch: fast RNA–RNA interaction search using a simplified nearest-neighbor energy model.
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- Bioinformatics, 2012, v. 28, n. 21, p. 2738, doi. 10.1093/bioinformatics/bts519
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- Article
RILogo: visualizing RNA–RNA interactions.
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- Bioinformatics, 2012, v. 28, n. 19, p. 2523, doi. 10.1093/bioinformatics/bts461
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- Publication type:
- Article
miRcode: a map of putative microRNA target sites in the long non-coding transcriptome.
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- Bioinformatics, 2012, v. 28, n. 15, p. 2062, doi. 10.1093/bioinformatics/bts344
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- Publication type:
- Article
Posttranscriptional regulation of T helper cell fate decisions.
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- Journal of Cell Biology, 2018, v. 217, n. 8, p. 2615, doi. 10.1083/jcb.201708075
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- Article
Analyzing inhibition of BCL11A gene expression in K562 cells by RNAi.
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- Journal of BioScience & Biotechnology, 2013, v. 2, n. 2, p. 131
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- Article
Disruption of Specific RNA-RNA Interactions in a Double-Stranded RNA Virus Inhibits Genome Packaging and Virus Infectivity.
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- PLoS Pathogens, 2015, v. 11, n. 12, p. 1, doi. 10.1371/journal.ppat.1005321
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- Publication type:
- Article
A novel measurement of allele discrimination for assessment of allele-specific silencing by RNA interference.
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- Molecular Biology Reports, 2014, v. 41, n. 11, p. 7115, doi. 10.1007/s11033-014-3586-7
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- Article
Perspectives and Challenges of Cell-Penetrating Peptides in Effective siRNA Delivery.
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- Nano Life, 2014, v. 4, n. 4, p. -1, doi. 10.1142/S1793984414410165
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- Article
VfoldCPX Server: Predicting RNA-RNA Complex Structure and Stability.
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- PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0163454
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- Article
Comprehensive Transcriptome Analyses of the Fructose-Fed Syrian Golden Hamster Liver Provides Novel Insights into Lipid Metabolism.
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- PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0162402
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- Article
Retraction Note: RNAi targeting CXCR4 inhibits proliferation and invasion of esophageal carcinoma cells.
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- Diagnostic Pathology, 2019, v. 14, n. 1, p. N.PAG, doi. 10.1186/s13000-019-0828-y
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- Article
ASSA: Fast identification of statistically significant interactions between long RNAs.
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- Journal of Bioinformatics & Computational Biology, 2018, v. 16, n. 1, p. -1, doi. 10.1142/S0219720018400012
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- Article
Thiophenyl-substituted triazolyl-thione l-alanine: asymmetric synthesis, aggregation and biological properties.
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- Amino Acids, 2014, v. 46, n. 10, p. 2325, doi. 10.1007/s00726-014-1782-3
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- Article
tRNA Shifts the G-quadruplex-Hairpin Conformational Equilibrium in RNA towards the Hairpin Conformer.
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- Angewandte Chemie International Edition, 2016, v. 55, n. 46, p. 14315, doi. 10.1002/anie.201605431
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- Article
Principles of miRNA-mRNA interactions: beyond sequence complementarity.
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- Cellular & Molecular Life Sciences, 2015, v. 72, n. 16, p. 3127, doi. 10.1007/s00018-015-1922-2
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- Article
Distribution of Human Immunodeficiency Virus (HIV) Ribonucleic Acid in Cerebrospinal Fluid and Blood Is Linked to CD4/CD8 Ratio During Acute HIV.
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- 2018
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- Publication type:
- journal article
Structural relation matching: an algorithm to identify structural patterns into RNAs and their interactions.
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- Journal of Integrative Bioinformatics, 2021, v. 18, n. 2, p. 111, doi. 10.1515/jib-2020-0039
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- Article
Rotavirus Genomic RNA Complex Forms via Specific RNA-RNA Interactions: Disruption of RNA Complex Inhibits Virus Infectivity.
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- Viruses (1999-4915), 2017, v. 9, n. 7, p. 167, doi. 10.3390/v9070167
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- Article
Israeli Acute Paralysis Virus Infection Leads to an Enhanced RNA Interference Response and Not Its Suppression in the Bumblebee Bombus terrestris.
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- Viruses (1999-4915), 2016, v. 8, n. 12, p. 334, doi. 10.3390/v8120334
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- Article
Replication Cycle and Molecular Biology of the West Nile Virus.
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- Viruses (1999-4915), 2014, v. 6, n. 1, p. 13, doi. 10.3390/v6010013
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- Article
RNA-RNA interaction prediction using genetic algorithm.
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- Algorithms for Molecular Biology, 2014, v. 9, n. 1, p. 2, doi. 10.1186/1748-7188-9-17
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- Article
Host Recognition Responses of Western (Family: Chrysomelidae) Corn Rootworm Larvae to RNA Interference and Bt Corn.
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- Journal of Insect Science, 2017, v. 17, n. 2, p. 1, doi. 10.1093/jisesa/iex022
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- Article
Differential correlation analysis of glioblastoma reveals immune ceRNA interactions predictive of patient survival.
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- BMC Cancer, 2017, v. 17, p. 1, doi. 10.1186/s12859-017-1557-4
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- Publication type:
- Article
Interactive implementations of thermodynamics-based RNA structure and RNA–RNA interaction prediction approaches for example-driven teaching.
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- PLoS Computational Biology, 2018, v. 14, n. 8, p. 1, doi. 10.1371/journal.pcbi.1006341
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- Article
Modifications in small nuclear RNAs and their roles in spliceosome assembly and function.
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- Biological Chemistry, 2018, v. 399, n. 11, p. 1265, doi. 10.1515/hsz-2018-0205
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- Publication type:
- Article
Techniques and applications: RNAi 'off-targets' pathogen infection.
- Published in:
- Nature Reviews Microbiology, 2014, v. 12, n. 5, p. 314, doi. 10.1038/nrmicro3257
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- Publication type:
- Article
Identification of microRNA-mRNA interactions in atrial fibrillation using microarray expression profiles and bioinformatics analysis.
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- Molecular Medicine Reports, 2016, v. 13, n. 6, p. 4535, doi. 10.3892/mmr.2016.5106
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- Publication type:
- Article
Identification of the proliferative effect of Smad2 and 3 in the TGF β2/Smad signaling pathway using RNA interference in a glioma cell line.
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- Molecular Medicine Reports, 2015, v. 12, n. 2, p. 1824, doi. 10.3892/mmr.2015.3614
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- Publication type:
- Article
Effects of small interfering RNA interference of connexin 37 on subcutaneous gastric tumours in mice.
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- Molecular Medicine Reports, 2014, v. 10, n. 6, p. 2955, doi. 10.3892/mmr.2014.2609
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- Publication type:
- Article
Efficient Translation of Pelargonium line pattern virus RNAs Relies on a TED-Like 3´-Translational Enhancer that Communicates with the Corresponding 5´-Region through a Long-Distance RNA-RNA Interaction.
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- PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0152593
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- Publication type:
- Article
lncRNA-RNA Interactions across the Human Transcriptome.
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- PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0150353
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- Publication type:
- Article
Unusual Loop-Sequence Flexibility of the Proximal RNA Replication Element in EMCV.
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- PLoS ONE, 2011, v. 6, n. 9, p. 1, doi. 10.1371/journal.pone.0024818
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- Publication type:
- Article
Computational prediction of lncRNA-mRNA interactionsby integrating tissue specificity in human transcriptome.
- Published in:
- Biology Direct, 2017, v. 12, p. 1, doi. 10.1186/s13062-017-0183-4
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- Publication type:
- Article
New in silico approach to assessing RNA secondary structures with non-canonical base pairs.
- Published in:
- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0718-6
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- Publication type:
- Article