Works matching DE "PLANT RNA"

Results: 576

IRGL-RRI: interpretable graph representation learning for plant RNA–RNA interaction discovery.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1617495

By:

Liao, Qingquan;
Liu, Xuchong;
Zhao, Wei;
Tong, Yu;
Xu, Fangzheng;
Liu, Xinxin;
Chen, Yifan

Publication type:

Article

The 6-kilodalton peptide 1 of the family Potyviridae : small in size but powerful in function.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1605199

By:

Yu, Liansheng;
Korxeelor, Xayvangye;
Wang, Ziyi;
Chang, Shuaifang;
Jiang, Xue;
Wu, Xiaoyun;
Cheng, Xiaofei

Publication type:

Article

Prevalence, genetic diversity, and molecular detection of the apple hammerhead viroid in Germany.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1592572

By:

Zikeli, Kerstin;
Berwarth, Constanze;
Born, Ute;
Leible, Thomas;
Jelkmann, Wilhelm;
Hagemann, Michael Helmut

Publication type:

Article

CRISPR-Cas13a as a next-generation tool for rapid and precise plant RNA virus diagnostics.

Published in:

Plant Methods, 2025, v. 21, n. 1, p. 1, doi. 10.1186/s13007-025-01401-9

By:

Karimi, Marzieh;
Ghorbani, Abozar;
Niazi, Ali;
Rostami, Mahsa;
Tahmasebi, Ahmad

Publication type:

Article

Comprehensive Analysis of Small RNA Modifications in Arabidopsis thaliana and Their Dynamics During Seed Germination.

Published in:

Metabolites (2218-1989), 2025, v. 15, n. 5, p. 319, doi. 10.3390/metabo15050319

By:

Jiang, Liu-Cheng;
Men, Meng;
Cui, Xuan-Jun;
Zeng, Ren-Jie;
Gu, Shu-Yi;
Feng, Tian;
Zeng, Chen;
Ye, Tiantian;
Xiong, Jun;
Yuan, Bi-Feng;
Feng, Yu-Qi

Publication type:

Article

Characterization of seed fatty acid accumulation in DELLA mutant lines of Arabidopsis.

Published in:

Plant Growth Regulation, 2013, v. 70, n. 1, p. 27, doi. 10.1007/s10725-012-9775-2

By:

Li, Zhilan;
Jiang, Yuxiao;
Hua, Shuijin;
Ren, Yun;
Jiang, Chiyu;
Zhou, Longhua;
Chen, Xiaoyang;
Jiang, Lixi

Publication type:

Article

Accumulation of the components of cyclic electron flow around photosystem I in C plants, with respect to the requirements for ATP.

Published in:

Photosynthesis Research, 2016, v. 129, n. 3, p. 261, doi. 10.1007/s11120-016-0251-0

By:

Ishikawa, Noriko;
Takabayashi, Atsushi;
Sato, Fumihiko;
Endo, Tsuyoshi

Publication type:

Article

Molecular characterization and transient expression in plants of a Mirabilis jalapa antiviral protein (MAP), and its use in functional studies.

Published in:

European Journal of Plant Pathology, 2022, v. 162, n. 2, p. 415, doi. 10.1007/s10658-021-02412-7

By:

khosroshahi, Taban Safarzadeh;
Canto, Tomas;
Rakhshandehroo, Farshad;
Salehi Jouzani, Gholamreza

Publication type:

Article

Molecular and functional characterization of the barley yellow striate mosaic virus genes encoding phosphoprotein, P3, P6 and P9.

Published in:

European Journal of Plant Pathology, 2021, v. 161, n. 1, p. 107, doi. 10.1007/s10658-021-02307-7

By:

Rabieifaradonbeh, Samira;
Afsharifar, Alireza;
Finetti-Sialer, Mariella M.

Publication type:

Article

The distribution and nucleotide sequences of chrysanthemum stunt viroid in dahlia fields in Japan and the effect of its infection on the growth of dahlias.

Published in:

European Journal of Plant Pathology, 2020, v. 156, n. 1, p. 245, doi. 10.1007/s10658-019-01883-z

By:

Asano, Shunsuke;
Yoshida, Kandai;
Naka, Terufumi;
Hirayama, Yoshihiko;
Matsushita, Yosuke

Publication type:

Article

Inter-laboratory comparison of four RT-PCR based methods for the generic detection of pospiviroids in tomato leaves and seeds.

Published in:

European Journal of Plant Pathology, 2016, v. 144, n. 3, p. 645, doi. 10.1007/s10658-015-0803-8

By:

Olivier, Thibaut;
Šveikauskas, Vaidevutis;
Demonty, Elisabeth;
Jonghe, Kris;
Gentit, Pascal;
Viršček-Marn, Mojca;
Grausgruber-Gröger, Sabine;
Morio, Sébastien;
Faggioli, Francesco;
Visage, Michèle;
Fauche, Frédéric;
Gusina, Maria;
Luigi, Marta;
Lasner, Helena;
Mavrič-Pleško, Irena

Publication type:

Article

Genetic variability among coat protein of Prune dwarf virus variants from different countries and different Prunus species.

Published in:

European Journal of Plant Pathology, 2014, v. 140, n. 4, p. 863, doi. 10.1007/s10658-014-0502-x

By:

Kalinowska, Elżbieta;
Mroczkowska, Karolina;
Paduch-Cichal, Elżbieta;
Chodorska, Maria

Publication type:

Article

Complete genome characterization of Sugarcane yellow leaf virus from India: Evidence for RNA recombination.

Published in:

European Journal of Plant Pathology, 2013, v. 135, n. 2, p. 335, doi. 10.1007/s10658-012-0090-6

By:

Chinnaraja, C.;
Viswanathan, R.;
Karuppaiah, R.;
Bagyalakshmi, K.;
Malathi, P.;
Parameswari, B.

Publication type:

Article

tasiRNAdb: a database of ta-siRNA regulatory pathways.

Published in:

Bioinformatics, 2014, v. 30, n. 7, p. 1045, doi. 10.1093/bioinformatics/btt746

By:

Zhang, Changqing;
Li, Guangping;
Zhu, Shinong;
Zhang, Shuo;
Fang, Jinggui

Publication type:

Article

Inferring the soybean (Glycine max) microRNA functional network based on target gene network.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 94, doi. 10.1093/bioinformatics/btt605

By:

Xu, Yungang;
Guo, Maozu;
Liu, Xiaoyan;
Wang, Chunyu;
Liu, Yang

Publication type:

Article

RNA-directed DNA methylation: an epigenetic pathway of increasing complexity.

Published in:

Nature Reviews Genetics, 2014, v. 15, n. 6, p. 394, doi. 10.1038/nrg3683

By:

Matzke, Marjori A.;
Mosher, Rebecca A.

Publication type:

Article

FUNCTIONAL GENOMIC PROFILING OF DROUGHT RESPONSIVE Micro-RNA IN WHEAT.

Published in:

Egyptian Journal of Genetics & Cytology, 2017, v. 46, n. 2, p. 363

By:

MORSY, Y. B.;
ABDEL-TAWAB, F. M.;
FAHMY, EMAN M.;
EISSA, HALA F.;
HASSANEIN, S. E.

Publication type:

Article

Association of a Potexvirus as a Causal Agent of Chlorotic Spots on Opuntia ficus-indica.

Published in:

Revista Mexicana de Fitopatología, 2015, v. 33, n. 1, p. 75

By:

Barrera, Berenice Alonso;
Aguilera, Gustavo Mora;
Ponce, Guadalupe Valdovinos;
Ochoa Martínez, Daniel Leobardo;
Leyva, Esteban Rodríguez

Publication type:

Article

Advances in Small RNA Regulation of Female Gametophyte Development in Flowering Plants.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1286, doi. 10.3390/plants14091286

By:

Liu, Yanfen;
He, Qing;
Su, Han;
Xi, Xinpeng;
Xu, Xiaoyuan;
Qin, Yuan;
Cai, Hanyang

Publication type:

Article

Transposon-Associated Small RNAs Involved in Plant Defense in Poplar.

Published in:

Plants (2223-7747), 2025, v. 14, n. 8, p. 1265, doi. 10.3390/plants14081265

By:

Long, Cui;
Du, Yuxin;
Guan, Yumeng;
Liu, Sijia;
Xie, Jianbo

Publication type:

Article

Trans-Kingdom RNA Dialogues: miRNA and milRNA Networks as Biotechnological Tools for Sustainable Crop Defense and Pathogen Control.

Published in:

Plants (2223-7747), 2025, v. 14, n. 8, p. 1250, doi. 10.3390/plants14081250

By:

Jia, Hui;
Li, Pan;
Li, Minye;
Liu, Ning;
Dong, Jingao;
Qu, Qing;
Cao, Zhiyan

Publication type:

Article

Viroids and Retrozymes: Plant Circular RNAs Capable of Autonomous Replication.

Published in:

Plants (2223-7747), 2025, v. 14, n. 1, p. 61, doi. 10.3390/plants14010061

By:

Lezzhov, Alexander A.;
Atabekova, Anastasia K.;
Chergintsev, Denis A.;
Lazareva, Ekaterina A.;
Solovyev, Andrey G.;
Morozov, Sergey Y.

Publication type:

Article

Development and Validation of One-Step Reverse Transcription-Droplet Digital PCR for Plum Pox Virus Detection and Quantification from Plant Purified RNA and Crude Extract.

Published in:

Plants (2223-7747), 2024, v. 13, n. 23, p. 3276, doi. 10.3390/plants13233276

By:

Bertinelli, Giorgia;
Tizzani, Lorenza;
Luigi, Marta;
Monticelli, Simona;
Ilardi, Vincenza

Publication type:

Article

Aggregation-Induced Emission Luminogens: A New Possibility for Efficient Visualization of RNA in Plants.

Published in:

Plants (2223-7747), 2024, v. 13, n. 5, p. 743, doi. 10.3390/plants13050743

By:

Yang, Zheng-Chao;
Zhao, Li-Xiang;
Sang, Yu-Qi;
Huang, Xin;
Lin, Xuan-Chen;
Yu, Zhi-Ming

Publication type:

Article

Small Talk: On the Possible Role of Trans-Kingdom Small RNAs during Plant–Virus–Vector Tritrophic Communication.

Published in:

Plants (2223-7747), 2023, v. 12, n. 6, p. 1411, doi. 10.3390/plants12061411

By:

Matsumura, Emilyn E.;
Kormelink, Richard

Publication type:

Article

A Viral Suppressor of RNA Silencing May Be Targeting a Plant Defence Pathway Involving Fibrillarin.

Published in:

Plants (2223-7747), 2022, v. 11, n. 15, p. 1903, doi. 10.3390/plants11151903

By:

Pérez-Cañamás, Miryam;
Taliansky, Michael;
Hernández, Carmen

Publication type:

Article

Plant Functional Genomics in A Few Days: Laser-Assisted Delivery of Double-Stranded RNA to Higher Plants.

Published in:

Plants (2223-7747), 2021, v. 10, n. 1, p. 93, doi. 10.3390/plants10010093

By:

Killiny, Nabil;
Gonzalez-Blanco, Pedro;
Gowda, Siddarame;
Martini, Xavier;
Etxeberria, Ed

Publication type:

Article

Dynamics and Functions of Stress Granules and Processing Bodies in Plants.

Published in:

Plants (2223-7747), 2020, v. 9, n. 9, p. 1122, doi. 10.3390/plants9091122

By:

Jang, Geng-Jen;
Jang, Jyan-Chyun;
Wu, Shu-Hsing

Publication type:

Article

Epigenetic Modifications: An Unexplored Facet of Exogenous RNA Application in Plants.

Published in:

Plants (2223-7747), 2020, v. 9, n. 6, p. 673, doi. 10.3390/plants9060673

By:

Dalakouras, Athanasios;
Papadopoulou, Kalliope K.

Publication type:

Article

Mechanisms of Plant Tolerance to RNA Viruses Induced by Plant-Growth-Promoting Microorganisms.

Published in:

Plants (2223-7747), 2019, v. 8, n. 12, p. 575, doi. 10.3390/plants8120575

By:

V, Maksimov I.;
V, Sorokan A.;
F, Burkhanova G.;
V, Veselova S.;
Yu, Alekseev V.;
Yu, Shein M.;
M, Avalbaev A.;
D, Dhaware P.;
T, Mehetre G.;
P, Singh B.;
M, Khairullin R.

Publication type:

Article

RNAi-Mediated Resistance Against Viruses in Perennial Fruit Plants.

Published in:

Plants (2223-7747), 2019, v. 8, n. 10, p. 359, doi. 10.3390/plants8100359

By:

Singh, Khushwant;
Dardick, Chris;
Kumar Kundu, Jiban

Publication type:

Article

Gene Regulation Mediated by microRNA-Triggered Secondary Small RNAs in Plants.

Published in:

Plants (2223-7747), 2019, v. 8, n. 5, p. 112, doi. 10.3390/plants8050112

By:

de Felippes, Felipe Fenselau

Publication type:

Article

Polyamines as Quality Control Metabolites Operating at the Post-Transcriptional Level.

Published in:

Plants (2223-7747), 2019, v. 8, n. 4, p. 109, doi. 10.3390/plants8040109

By:

Poidevin, Laetitia;
Unal, Dilek;
Belda-Palazón, Borja;
Ferrando, Alejandro

Publication type:

Article

Evolutionary Analysis of GH3 Genes in Six Oryza Species/Subspecies and Their Expression under Salinity Stress in Oryza sativa ssp. japonica.

Published in:

Plants (2223-7747), 2019, v. 8, n. 2, p. 30, doi. 10.3390/plants8020030

By:

Kong, Weilong;
Zhong, Hua;
Deng, Xiaoxiao;
Gautam, Mayank;
Gong, Ziyun;
Zhang, Yue;
Zhao, Gangqing;
Liu, Chang;
Li, Yangsheng

Publication type:

Article

Differential Expression Proteins Contribute to Race-Specific Resistant Ability in Rice (Oryza sativa L.).

Published in:

Plants (2223-7747), 2019, v. 8, n. 2, p. 29, doi. 10.3390/plants8020029

By:

Ma, Shiwei;
Lin, Shoukai;
Wang, Menglin;
Zou, Yang;
Tao, Huan;
Liu, Wei;
Zhang, Lina;
Liang, Kangjing;
Ai, Yufang;
He, Huaqin

Publication type:

Article

Phytophthora effector PSR1 hijacks the host pre-mRNA splicing machinery to modulate small RNA biogenesis and plant immunity.

Published in:

Plant Cell, 2022, v. 34, n. 9, p. 3443, doi. 10.1093/plcell/koac176

By:

Gui, Xinmeng;
Zhang, Peng;
Wang, Dan;
Ding, Zhan;
Wu, Xian;
Shi, Jinxia;
Shen, Qian-Hua;
Xu, Yong-Zhen;
Ma, Wenbo;
Qiao, Yongli

Publication type:

Article

Plant telomere biology: The green solution to the end-replication problem.

Published in:

Plant Cell, 2022, v. 34, n. 7, p. 2492, doi. 10.1093/plcell/koac122

By:

Shakirov, Eugene V.;
Chen, Julian J.-L.;
Shippen, Dorothy E.

Publication type:

Article

Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.

Published in:

Plant Cell, 2022, v. 34, n. 6, p. 2140, doi. 10.1093/plcell/koac067

By:

Xuan Du;
Zhenlin Yang;
Florez Ariza, Alfredo Jose;
Qian Wang;
Guohui Xie;
Sisi Li;
Jiamu Du

Publication type:

Article

RDR2 in maize: one-way road to double-stranded RNA.

Published in:

Plant Cell, 2022, v. 34, n. 6, p. 2104, doi. 10.1093/plcell/koac100

By:

Zicola, Johan

Publication type:

Article

Turnip Mosaic Virus Uses the SNARE Protein VTI11 in an Unconventional Route for Replication Vesicle Trafficking.

Published in:

Plant Cell, 2018, v. 30, n. 10, p. 2594, doi. 10.1105/tpc.18.00281

By:

Cabanillas, Daniel Garcia;
Jiang, Jun;
Movahed, Nooshin;
Germain, Hugo;
Yamaji, Yasuyuki;
Zheng, Huanquan;
Laliberté, Jean-François

Publication type:

Article

Blake C. Meyers.

Published in:

Plant Cell, 2018, v. 30, n. 7, p. 1375, doi. 10.1105/tpc.18.00461

By:

Harkess, Alex;
Frank, Margaret

Publication type:

Article

Loss of RNA-Directed DNA Methylation in Maize Chromomethylase and DDM1-Type Nucleosome Remodeler Mutants.

Published in:

Plant Cell, 2018, v. 30, n. 7, p. 1617, doi. 10.1105/tpc.18.00053

By:

Fu, Fang-Fang;
Dawe, R. Kelly;
Gent, Jonathan I.

Publication type:

Article

Revisiting Criteria for Plant MicroRNA Annotation in the Era of Big Data.

Published in:

Plant Cell, 2018, v. 30, n. 2, p. 272, doi. 10.1105/tpc.17.00851

By:

Axtell, Michael J.;
Meyers, Blake C.

Publication type:

Article

Salt Stress and CTD PHOSPHATASE-LIKE4 Mediate the Switch between Production of Small Nuclear RNAs and mRNAs.

Published in:

Plant Cell, 2017, v. 29, n. 12, p. 3214, doi. 10.1105/tpc.17.00331

By:

Fukudome, Akihito;
Sun, Di;
Zhang, Xiuren;
Koiwa, Hisashi

Publication type:

Article

More Than Window Dressing: Revealing 5-Methylcytocine Patterns That Decorate Arabidopsis RNA.

Published in:

Plant Cell, 2017, v. 29, n. 3, p. 425, doi. 10.1105/tpc.17.00026

By:

Lockhart, Jennifer

Publication type:

Article

DNA Methylation Influences the Expression of DICER-LIKE4 Isoforms, Which Encode Proteins of Alternative Localization and Function.

Published in:

Plant Cell, 2016, v. 28, n. 11, p. 2786, doi. 10.1105/tpc.16.00554

By:

Pumplin, Nathan;
Sarazin, Alexis;
Jullien, Pauline E.;
Bologna, Nicolas G.;
Oberlin, Stefan;
Voinnet, Olivier

Publication type:

Article

Reverse Transcriptase/RNA Maturase Protein MatR Is Required for the Splicing of Various Group II Introns in Brassicaceae Mitochondria.

Published in:

Plant Cell, 2016, v. 28, n. 11, p. 2805, doi. 10.1105/tpc.16.00398

By:

Sultan, Laure D.;
Mileshina, Daria;
Grewe, Felix;
Rolle, Katarzyna;
Abudraham, Sivan;
Głodowicz, Paweł;
Niazi, Adnan Khan;
Keren, Ido;
Shevtsov, Sofia;
Klipcan, Liron;
Barciszewski, Jan;
Mower, Jeffrey P.;
Dietrich, André;
Ostersetzer-Biran, Oren

Publication type:

Article

Global Analysis of Truncated RNA Ends Reveals New Insights into Ribosome Stalling in Plants.

Published in:

Plant Cell, 2016, v. 28, n. 10, p. 2398, doi. 10.1105/tpc.16.00295

By:

Hou, Cheng‐Yu;
Lee, Wen‐Chi;
Chou, Hsiao‐Chun;
Chen, Ai‐Ping;
Chou, Shu‐Jen;
Chen, Ho‐Ming

Publication type:

Article

Genome-Wide Mapping of Uncapped and Cleaved Transcripts Reveals a Role for the Nuclear mRNA Cap-Binding Complex in Cotranslational RNA Decay in Arabidopsis.

Published in:

Plant Cell, 2016, v. 28, n. 10, p. 2385, doi. 10.1105/tpc.16.00456

By:

Yu, Xiang;
Willmann, Matthew R.;
Anderson, Stephen J.;
Gregory, Brian D.

Publication type:

Article

Nucleolar Fibrillarin Protein Is Required for Helper Virus-Independent Long-Distance Trafficking of a Subviral Satellite RNA in Plants.

Published in:

Plant Cell, 2016, v. 28, n. 10, p. 2586, doi. 10.1105/tpc.16.00071

By:

Chang, Chih-Hao;
Hsu, Fu-Chen;
Lee, Shu-Chuan;
Lo, Yih-Shan;
Wang, Jiun-Da;
Shaw, Jane;
Taliansky, Michael;
Chang, Ban-Yang;
Hsu, Yau-Heiu;
Lin, Na-Sheng

Publication type:

Article