Works matching DE "VIRAL genomes"

Results: 4080

Characteristics of the gut virome in patients with premalignant colorectal adenoma.

Published in:

Journal of Translational Medicine, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12967-025-06404-7

By:

Zhang, Pan;
Tuo, Xiaofeng;
Jiang, Jiong;
Zhang, Yue;
Zhao, Juhui;
Deng, Chengzhao;
Zhao, Gang;
Cheng, Yan;
Song, Lingqin;
Yang, Yan;
Guo, Ruochun;
Zhang, Huan;
Zhao, Hongli;
Ma, Shiyang;
Li, Lu;
Shi, Haitao

Publication type:

Article

Characterization of an Emerging Recombinant Duck Circovirus in Northern Vietnam, 2023–2024.

Published in:

Viruses (1999-4915), 2025, v. 17, n. 5, p. 732, doi. 10.3390/v17050732

By:

Dong, Hieu Van;
Trinh, Dai Quang;
Tran, Giang Huong Thi;
Vu, Thanh Thi;
Nguyen, Thinh Hung Ba;
Rattanasrisomporn, Amonpun;
Bui, Dao Anh Tran;
Rattanasrisomporn, Jatuporn

Publication type:

Article

The Junction Between nsp1β and nsp2 in the Porcine Reproductive and Respiratory Syndrome Virus Genome Is a New Site for the Insertion and Expression of Foreign Genes.

Published in:

Viruses (1999-4915), 2025, v. 17, n. 5, p. 656, doi. 10.3390/v17050656

By:

Xiao, Changguang;
Lin, Yafang;
Zhang, Hailong;
Li, Zongjie;
Liu, Ke;
Li, Beibei;
Shao, Donghua;
Qiu, Yafeng;
Ma, Zhiyong;
Wei, Jianchao

Publication type:

Article

The Impact of EPAC2 -Associated Junction Plakoglobin on Respiratory Syncytial Virus Infection.

Published in:

Viruses (1999-4915), 2025, v. 17, n. 5, p. 627, doi. 10.3390/v17050627

By:

Takle, Chaitra A.;
Choi, Eun-Jin;
Choi, Eun Seok;
Deepak, Devang;
Khatkar, Kashish;
Choi, Jong Min;
Zhang, Ke;
Jung, Sung Yun;
Wang, Tian;
Wu, Wenzhe;
Bao, Xiaoyong

Publication type:

Article

Activity of novel virus families infecting soil nitrifiers is concomitant with host niche differentiation.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae205

By:

Lee, Sungeun;
Hazard, Christina;
Nicol, Graeme W

Publication type:

Article

Tailless and filamentous prophages are predominant in marine Vibrio.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae202

By:

Steensen, Kerrin;
Séneca, Joana;
Bartlau, Nina;
Yu, Xiaoqian A;
Hussain, Fatima A;
Polz, Martin F

Publication type:

Article

Adaptation strategies of giant viruses to low-temperature marine ecosystems.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae162

By:

Buscaglia, Marianne;
Iriarte, José Luis;
Schulz, Frederik;
Díez, Beatriz

Publication type:

Article

Globally distributed bacteriophage genomes reveal mechanisms of tripartite phage–bacteria–coral interactions.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae132

By:

Wallace, Bailey A;
Varona, Natascha S;
Hesketh-Best, Poppy J;
Stiffler, Alexandra K;
Silveira, Cynthia B

Publication type:

Article

Large-scale single-virus genomics uncovers hidden diversity of river water viruses and diversified gene profiles.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae124

By:

Nishikawa, Yohei;
Wagatsuma, Ryota;
Tsukada, Yuko;
Chia-ling, Lin;
Chijiiwa, Rieka;
Hosokawa, Masahito;
Takeyama, Haruko

Publication type:

Article

Hypermutation by intersegmental transfer of APOBEC3G cytidine deaminase.

Published in:

Nature Structural & Molecular Biology, 2008, v. 15, n. 10, p. 1059, doi. 10.1038/nsmb.1495

By:

Nowarski, Roni;
Britan-Rosich, Elena;
Shiloach, Tamar;
Kotler, Moshe

Publication type:

Article

Viral evolution: Variation in the gut virome.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 9, p. 596, doi. 10.1038/nrmicro3092

By:

Hofer, Ursula

Publication type:

Article

Viral evolution: It takes two genomes.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 2, p. 70, doi. 10.1038/nrmicro2952

By:

Kåhrström, Christina Tobin

Publication type:

Article

Why do RNA viruses recombine?

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 8, p. 617, doi. 10.1038/nrmicro2614

By:

Simon-Loriere, Etienne;
Holmes, Edward C.

Publication type:

Article

Virus evolution: how far does the double β-barrel viral lineage extend?

Published in:

Nature Reviews Microbiology, 2008, v. 6, n. 12, p. 941, doi. 10.1038/nrmicro2033

By:

Krupovič, Mart;
Bamford, Dennis H.

Publication type:

Article

Virus trafficking – learning from single-virus tracking.

Published in:

Nature Reviews Microbiology, 2007, v. 5, n. 3, p. 197, doi. 10.1038/nrmicro1615

By:

Brandenburg, Boerries;
Zhuang, Xiaowei

Publication type:

Article

Round and round for Dengue.

Published in:

Nature Reviews Microbiology, 2006, v. 4, n. 10, p. 722, doi. 10.1038/nrmicro1507

By:

Jones, Susan

Publication type:

Article

Opinion: Viral metagenomics.

Published in:

Nature Reviews Microbiology, 2005, v. 3, n. 6, p. 504, doi. 10.1038/nrmicro1163

By:

Edwards, Robert A.;
Rohwer, Forest

Publication type:

Article

What human sperm RNA-Seq tells us about the microbiome.

Published in:

Journal of Assisted Reproduction & Genetics, 2020, v. 37, n. 2, p. 359, doi. 10.1007/s10815-019-01672-x

By:

Swanson, Grace M.;
Moskovtsev, Sergey;
Librach, Clifford;
Pilsner, J. Richard;
Goodrich, Robert;
Krawetz, Stephen A.

Publication type:

Article

Study of Translation and Replication of the Marburg Virus System Constructed Based on the Viral Genome.

Published in:

Doklady Biochemistry & Biophysics, 2002, v. 383, n. 1-6, p. 108, doi. 10.1023/A:1015383618008

By:

Kachko, A. V.;
Sorokin, A. V.;
Belanov, E. F.;
Ivanova, A. V.;
Bukreyev, A. A.;
Collins, P.;
Netesov, S. V.

Publication type:

Article

Multiple Genetic Differences between the Monkeypox and Variola Viruses.

Published in:

Doklady Biochemistry & Biophysics, 2002, v. 384, n. 1-6, p. 143, doi. 10.1023/A:1016016013042

By:

Shchelkunov, S. N.;
Totmenin, A. V.;
Safronov, P. F.;
Gutorov, V. V.;
Ryazankina, V;
Petrov, N. A.;
Babkin, I. V.;
Uvarova, E. A.;
Mikheev, M. V.;
Sisler, J. R.;
Esposito, J. J.;
Jahrling, P. B.;
Moss, B.;
Sandakhchiev, L. S.

Publication type:

Article

Self-Assembly of Measles Virus Nucleocapsid-like Particles: Kinetics and RNA Sequence Dependence.

Published in:

Angewandte Chemie, 2016, v. 128, n. 32, p. 9502, doi. 10.1002/ange.201602619

By:

Milles, Sigrid;
Jensen, Malene Ringkjøbing;
Communie, Guillaume;
Maurin, Damien;
Schoehn, Guy;
Ruigrok, Rob W. H.;
Blackledge, Martin

Publication type:

Article

Whole-Genome Sequencing of a Single Viral Species from a Highly Heterogeneous Sample.

Published in:

Angewandte Chemie, 2015, v. 127, n. 47, p. 14191, doi. 10.1002/ange.201507047

By:

Han, Hee‐Sun;
Cantalupo, Paul G.;
Rotem, Assaf;
Cockrell, Shelley K.;
Carbonnaux, Martial;
Pipas, James M.;
Weitz, David A.

Publication type:

Article

Shedding new light on viral photosynthesis.

Published in:

Photosynthesis Research, 2015, v. 126, n. 1, p. 71, doi. 10.1007/s11120-014-0057-x

By:

Puxty, Richard;
Millard, Andrew;
Evans, David;
Scanlan, David

Publication type:

Article

Recombination, phylogenetic insights and co-existence dynamics of begomoviruses and satellite DNAs: implications for tomato viral disease management.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-025-10499-y

By:

Naveen, Murugesan;
Shanmugam, Pagalahalli Sankaran;
Srinivasan, Ramasamy;
Shanthi, Mookiah;
Murugan, Marimuthu;
Sivagnanapazham, Kathiresan;
Angappan, Kathithachalam;
Oliva, Ricardo;
Karthikeyan, Gandhi;
Boopathi, Narayanan Manikanda

Publication type:

Article

Newly designed amplicons-based method for near-full-length genome (NFLG) sequencing of HIV-1 group M recombinant forms.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-025-10470-x

By:

Moscona, Roy;
Wagner, Tali;
Geva, Miranda;
Bucris, Efrat;
Erster, Oran;
Zuckerman, Neta S.;
Mor, Orna

Publication type:

Article

Characterization of the viral genome of Omicron variants of SARS-CoV-2 circulating in Tripura, a remote frontier state in Northeastern India.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-10048-z

By:

Chakrabarti, Ankan;
Majumder, Saikat;
Sarkar, Apurba;
Majumdar, Tapan

Publication type:

Article

Evaluation of human papillomavirus type 16 viral load and genome physical status in Iranian women with cervical disease.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-09397-6

By:

Setayeshi, Shadi;
Hasanzadeh, Ali;
Yahyapour, Yousef;
Alizadeh, Ahad;
Ghorbani, Hossein;
Nokhostin, Fahimeh;
Bagheri, Meghdad;
Sadeghi, Farzin

Publication type:

Article

Impact of the topology of viral RNAs on their encapsulation by virus coat proteins.

Published in:

Journal of Biological Physics, 2013, v. 39, n. 2, p. 289, doi. 10.1007/s10867-013-9307-y

By:

Schoot, Paul;
Zandi, Roya

Publication type:

Article

The icosahedral RNA virus as a grotto: organizing the genome into stalagmites and stalactites.

Published in:

Journal of Biological Physics, 2013, v. 39, n. 2, p. 163, doi. 10.1007/s10867-013-9312-1

By:

Harvey, Stephen;
Zeng, Yingying;
Heitsch, Christine

Publication type:

Article

Strongly correlated electrostatics of viral genome packaging.

Published in:

Journal of Biological Physics, 2013, v. 39, n. 2, p. 247, doi. 10.1007/s10867-013-9301-4

By:

Nguyen, Toan

Publication type:

Article

Molecular characterization of the garlic virus B genome and evidence of allexivirus recombination.

Published in:

European Journal of Plant Pathology, 2019, v. 153, n. 1, p. 307, doi. 10.1007/s10658-018-1534-4

By:

Celli, Marcos G.;
Perotto, Maria C.;
Luciani, Cecilia E.;
Pozzi, Elizabeth A.;
Conci, Vilma C.

Publication type:

Article

Genome characterization and distribution of Taro bacilliform CH virus on taro in Hawaii, USA.

Published in:

European Journal of Plant Pathology, 2018, v. 150, n. 4, p. 1107, doi. 10.1007/s10658-017-1353-z

By:

Yanan Wang;
Borth, Wayne B.;
Green, James C.;
Hamim, Islam;
Keqiang Cao;
Hu, John S.;
Melzer, Michael J.

Publication type:

Article

Correction to: Genome characterization and distribution of Taro bacilliform CH virus on taro in Hawaii, USA.

Published in:

2018

By:

Wang, Yanan;
Borth, Wayne B.;
Green, James C.;
Hamim, Islam;
Cao, Keqiang;
Hu, John S.;
Melzer, Michael J.

Publication type:

Erratum

Molecular characterization of two divergent variants of sugarcane bacilliform viruses infecting sugarcane in China.

Published in:

European Journal of Plant Pathology, 2016, v. 145, n. 2, p. 375, doi. 10.1007/s10658-015-0851-0

By:

Sun, Sheng-Ren;
Damaj, Mona;
Alabi, Olufemi;
Wu, Xiao-Bin;
Erik Mirkov, T.;
Fu, Hua-Ying;
Chen, Ru-Kai;
Gao, San-Ji

Publication type:

Article

Association mapping resolving the major loci Scmv2 conferring resistance to sugarcane mosaic virus in maize.

Published in:

European Journal of Plant Pathology, 2016, v. 145, n. 2, p. 385, doi. 10.1007/s10658-015-0852-z

By:

Li, Zhimin;
Chen, Jiafa;
Han, Liping;
Wen, Jingjing;
Chen, Gengshen;
Li, Huimin;
Wang, Yongxia;
Zhao, Rongbing;
Zhang, Xuecai;
Xia, Zongliang;
Yan, Jianbing;
Wu, Jianyu;
Ding, Junqiang

Publication type:

Article

Analysis of the coat protein gene of Indian Potato virus X isolates for identification of strain groups and determination of the complete genome sequence of two isolates.

Published in:

European Journal of Plant Pathology, 2016, v. 145, n. 2, p. 447, doi. 10.1007/s10658-016-0858-1

By:

Jeevalatha, Arjunan;
Kaundal, Priyanka;
Kumar, Ravinder;
Raigond, Baswaraj;
Gupta, Mohit;
Kumar, Ashwani;
Sharma, Sanjeev;
Sagar, Vinay;
Nagesh, Mandadi;
Singh, Bir

Publication type:

Article

Complete genomic sequence of a Pineapple mealybug wilt- associated virus-1 from Hainan Island, China.

Published in:

European Journal of Plant Pathology, 2015, v. 141, n. 3, p. 611, doi. 10.1007/s10658-014-0545-z

By:

Yu, Naitong;
Luo, Zhiwen;
Fan, Hongyan;
Zhang, Zhili;
Li, Xianghong;
Wang, Jianhua;
Liu, Zhixin;
He, Fan

Publication type:

Article

Identification of a group of Mus dunni endogenous virus-like endogenous retroviruses from the C57BL/6J mouse genome: proviral genomes, strain distribution, expression characteristics, and genomic integration profile.

Published in:

Chromosome Research, 2012, v. 20, n. 7, p. 859, doi. 10.1007/s10577-012-9322-z

By:

Lee, Kang-Hoon;
You, Ri-Na;
Greenhalgh, David;
Cho, Kiho

Publication type:

Article

Medicinal chemistry strategies toward host targeting antiviral agents.

Published in:

Medicinal Research Reviews, 2020, v. 40, n. 5, p. 1519, doi. 10.1002/med.21664

By:

Ji, Xingyue;
Li, Zhuorong

Publication type:

Article

Significant Differences in Planktonic Virus Communities Between "Cellular Fraction" (0.22 ~ 3.0 µm) and "Viral Fraction" (< 0.22 μm) in the Ocean.

Published in:

Microbial Ecology, 2023, v. 86, n. 2, p. 825, doi. 10.1007/s00248-022-02167-6

By:

Zhao, Jiulong;
Wang, Zengmeng;
Li, Chengcheng;
Shi, Tongmei;
Liang, Yantao;
Jiao, Nianzhi;
Zhang, Yongyu

Publication type:

Article

Quantifying Ostreid Herpesvirus (OsHV-1) Genome Copies and Expression during Transmission.

Published in:

Microbial Ecology, 2012, v. 63, n. 3, p. 596, doi. 10.1007/s00248-011-9937-1

By:

Burge, Colleen;
Friedman, Carolyn

Publication type:

Article

A distinct subgroup of cardiomyopathy patients characterized by transcriptionally active cardiotropic erythrovirus and altered cardiac gene expression.

Published in:

Basic Research in Cardiology, 2013, v. 108, n. 5, p. 1, doi. 10.1007/s00395-013-0372-y

By:

Kuhl, U.;
Lassner, D.;
Dorner, A.;
Rohde, M.;
Escher, F.;
Seeberg, B.;
Hertel, E.;
Tschope, C.;
Skurk, C.;
Gross, U. M.;
Schultheiss, H.-P.;
Poller, W.

Publication type:

Article

Virus entry paradigms.

Published in:

Amino Acids, 2011, v. 41, n. 5, p. 1147, doi. 10.1007/s00726-009-0363-3

By:

Kalia, Manjula;
Jameel, Shahid

Publication type:

Article

Gimme shelter: three-dimensional architecture of the endoplasmic reticulum, the replication site of grapevine Pinot gris virus.

Published in:

Functional Plant Biology, 2021, v. 48, n. 10, p. 1074, doi. 10.1071/FP21084

By:

Pagliari, Laura;
Tarquini, Giulia;
Loschi, Alberto;
Buoso, Sara;
Kapun, Gregor;
Ermacora, Paolo;
Musetti, Rita

Publication type:

Article

Identifying SARS-CoV-2 antiviral compounds by screening for small molecule inhibitors of nsp14/ nsp10 exoribonuclease.

Published in:

Biochemical Journal, 2021, v. 478, n. 13, p. 2445, doi. 10.1042/BCJ20210198

By:

Canal, Berta;
McClure, Allison W.;
Curran, Joseph F.;
Wu, Mary;
Ulferts, Rachel;
Weissmann, Florian;
Jingkun Zeng;
Bertolin, Agustina P.;
Milligan, Jennifer C.;
Basu, Souradeep;
Drury, Lucy S.;
Deegan, Tom D.;
Fujisawa, Ryo;
Roberts, Emma L.;
Basier, Clovis;
Labib, Karim;
Beale, Rupert;
Howell, Michael;
Diffley, John F. X.

Publication type:

Article

A novel polyubiquitin chain linkage formed by viral Ubiquitin is resistant to host deubiquitinating enzymes.

Published in:

Biochemical Journal, 2020, v. 477, n. 12, p. 2193, doi. 10.1042/BCJ20200289

By:

Negi, Hitendra;
Reddy, Pothula Purushotham;
Vengayil, Vineeth;
Patole, Chhaya;
Laxman, Sunil;
Das, Ranabir

Publication type:

Article

Türkiye'de Varroa Akarlarında Lake Sinai Virus (LSV)' un İlk Tespiti.

Published in:

Veterinary Sciences & Practices, 2022, v. 17, n. 1, p. 16, doi. 10.54614/VetSciPract.2022.1040020

By:

ÇAĞIRGAN, Abdurrahman Anıl;
KAPLAN, Murat;
PEKMEZ, Kemal;
ARSLAN, Fatih

Publication type:

Article

QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data.

Published in:

Bioinformatics, 2018, v. 34, n. 1, p. 163, doi. 10.1093/bioinformatics/btx402

By:

Skums, Pavel;
Zelikovsky, Alex;
Singh, Rahul;
Gussler, Walker;
Dimitrova, Zoya;
Knyazev, Sergey;
Mandric, Igor;
Ramachandran, Sumathi;
Campo, David;
Jha, Deeptanshu

Publication type:

Article

ViPTree: the viral proteomic tree server.

Published in:

Bioinformatics, 2017, v. 33, n. 15, p. 2379, doi. 10.1093/bioinformatics/btx157

By:

Yosuke Nishimura;
Takashi Yoshida;
Megumi Kuronishi;
Hideya Uehara;
Hiroyuki Ogata;
Susumu Goto

Publication type:

Article

Prediction of conserved long-range RNA-RNA interactions in full viral genomes.

Published in:

Bioinformatics, 2016, v. 32, n. 19, p. 2928, doi. 10.1093/bioinformatics/btw323

By:

Fricke, Markus;
Marz, Manja

Publication type:

Article