Works matching DE "GENOMICS"

Results: 5000

Genomic Landscape of Advanced Solid Tumors in Middle East and North Africa Using Circulating Tumor DNA in Routine Clinical Practice.

Published in:

Oncology, 2025, v. 103, n. 6, p. 508, doi. 10.1159/000541571

By:

Dawood, Shaheenah;
Sandhir, Nippun;
Akasheh, Marwan;
El Khoury, Maroun;
Otsmane, Sonia;
Alnassar, Muath;
Abulkhair, Omalkhair;
Farhat, Fadi;
Olsen, Steve

Publication type:

Article

Chromosome‐level genome assembly of Dendrothrips minowai and genomic analysis highlights distinct adaptations to high polyphenols in tea plants.

Published in:

Pest Management Science, 2025, v. 81, n. 7, p. 4143, doi. 10.1002/ps.8781

By:

Xiu, Chunli;
Zhao, Dehai;
Zhang, Jiahui;
Liu, Haitao;
Wang, Yusheng;
Liu, Hangwei;
Cai, Xiaoming;
Luo, Zongxiu;
Bian, Lei;
Fu, Nanxia;
Zhou, Li;
Chen, Zongmao;
Li, Zhaoqun

Publication type:

Article

Whole genome sequence analysis of a novel Streptomyces sp. BG6AG reveals its lipase production potential: optimization of the process through Taguchi experimental design.

Published in:

3 Biotech, 2025, v. 15, n. 7, p. 1, doi. 10.1007/s13205-025-04369-4

By:

Parwez, Zahra;
Behera, Subhransu Sekhar;
Panda, Ananta Narayan;
Gouda, Sudhansu Kumar;
Ray, Lopamudra

Publication type:

Article

RE: Comprehensive genome profiling for treatment decisions in patients with metastatic tumors: real-world evidence meta-analysis and registry data implementation Free.

Published in:

JNCI: Journal of the National Cancer Institute, 2025, v. 117, n. 6, p. 1283, doi. 10.1093/jnci/djaf079

By:

Yuan, Jing;
Yu, Jianxiong

Publication type:

Article

Comprehensive genome profiling for treatment decisions in patients with metastatic tumors: real-world evidence meta-analysis and registry data implementation Open Access.

Published in:

JNCI: Journal of the National Cancer Institute, 2025, v. 117, n. 6, p. 1117, doi. 10.1093/jnci/djaf015

By:

Zerdes, Ioannis;
Filis, Panagiotis;
Fountoukidis, Georgios;
El-Naggar, Ali Inan;
Kalofonou, Foteini;
D'Alessio, Antonio;
Pouptsis, Athanasios;
Foukakis, Theodoros;
Pentheroudakis, George;
Ahlgren, Johan;
Smith, Daniel;
Valachis, Antonios

Publication type:

Article

Modifiable risk factors and inflammation-related proteins in polymyalgia rheumatica: genome-wide meta-analysis and Mendelian randomization Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3012, doi. 10.1093/rheumatology/keae308

By:

Zhao, Sizheng Steven;
Mackie, Sarah L;
Larsson, Susanna C;
Burgess, Stephen;
Yuan, Shuai

Publication type:

Article

Genomic analysis association of tolerance to heat stress in subtropical Egyptian goats Raised in hot dry environment.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11748-x

By:

Aboul-Naga, Adel M.;
Alsamman, Alsamman M.;
Melak, Sherif;
Nassar, Ahmed E.;
Abdelsabour, Taha H.;
Gamal, Layaly;
Adley, Monica;
Elshafie, Mohmed H.

Publication type:

Article

Type III Secretion System-Mediated Induction of Systemic Resistance by Pseudomonas marginalis ORh26 Enhances Sugar Beet Defence Against Pseudomonas syringae pv. aptata.

Published in:

Plants (2223-7747), 2025, v. 14, n. 11, p. 1621, doi. 10.3390/plants14111621

By:

Nedeljković, Marija;
Mesaroš, Aleksandra;
Radosavljević, Marija;
Đorđević, Nikola;
Stanković, Slaviša;
Lozo, Jelena;
Atanasković, Iva

Publication type:

Article

Genome-Wide Identification and Expression Analysis of the LbDof Transcription Factor Family Genes in Lycium barbarum.

Published in:

Plants (2223-7747), 2025, v. 14, n. 11, p. 1567, doi. 10.3390/plants14111567

By:

Wang, Yuchang;
Wang, Hongrui;
Li, Weinan;
Dai, Guoli;
Chen, Jinhuan

Publication type:

Article

Comparative genomic analysis reveals the emergence and dissemination of different Salmonella enterica serovar Gallinarum biovar Gallinarum lineages in Brazil.

Published in:

Avian Pathology, 2025, v. 54, n. 4, p. 476, doi. 10.1080/03079457.2025.2458601

By:

Kipper, Diéssy;
Orsi, Renato Hohl;
de Souza Zanetti, Nathalie;
De Carli, Silvia;
Mascitti, Andrea Karoline;
Fonseca, André Salvador Kazantzi;
Ikuta, Nilo;
Wiedmann, Martin;
Lunge, Vagner Ricardo

Publication type:

Article

Navigating phylogenetic conflict and evolutionary inference in plants with target-capture data.

Published in:

Australian Systematic Botany, 2025, v. 38, n. 3, p. 1, doi. 10.1071/SB24011

By:

Joyce, E. M.;
Schmidt-Lebuhn, A. N.;
Orel, H. K.;
Nge, F. J.;
Anderson, B. M.;
Hammer, T. A.;
McLay, T. G. B.

Publication type:

Article

Genome-Wide Identification and Expression Analysis of Zona Pellucida (ZP) Gene Family in Cynoglossus semilaevis.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5346, doi. 10.3390/ijms26115346

By:

Zhang, Kaili;
Chen, Zhangfan;
Gao, Chengbin;
Li, Xihong;
Wang, Na;
Zhang, Min;
Yan, Haipeng;
Sha, Zhenxia;
Chen, Songlin

Publication type:

Article

Phage–Antibiotic Synergy Enhances Biofilm Eradication and Survival in a Zebrafish Model of Pseudomonas aeruginosa Infection.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5337, doi. 10.3390/ijms26115337

By:

Lin, Ling-Chun;
Tsai, Yu-Chuan;
Lin, Nien-Tsung

Publication type:

Article

Chromosome-Level Genome Assembly and Genomic Analysis of the Hybrid Grouper ShanHu (Epinephelus fuscoguttatus ♀ × Epinephelus polyphekadion ♂).

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5036, doi. 10.3390/ijms26115036

By:

Liu, Yiqun;
Mao, Yunxiang

Publication type:

Article

Characterization of the 172 SNPs Included in the ForenSeq™ DNA Signature Prep Kit in a Population from Northeast Italy.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5035, doi. 10.3390/ijms26115035

By:

Saccardo, Chiara;
De Leo, Domenico;
Turrina, Stefania

Publication type:

Article

Whole Genome Sequencing to Identify Novel Germline Fumarate Hydratase Mutation in Child With Bilateral Renal Cell Carcinoma.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 702, doi. 10.1111/cge.14723

By:

Kershaw, Christopher;
Demain, Leigh;
Baker, Eleanor;
Burghel, George;
Durkie, Miranda;
Forde, Claire;
Makin, Guy;
Cheesman, Edmund;
Warren, Anne;
Gokhale, David;
Schlecht, Helene;
Maher, Eamonn;
Oliveira, Pedro;
Woodward, Emma

Publication type:

Article

Whole-genome resequencing reveals positive selection and introgression signatures and genetic loci associated with early puberty traits in Chinese indigenous pigs.

Published in:

Genetics Selection Evolution, 2025, v. 57, n. 1, p. 1, doi. 10.1186/s12711-025-00975-1

By:

Cao, Minghao;
Yuan, Tiantian;
Li, Dong;
Wang, Yulong;
Zhang, Lin;
Sun, Jingchun;
Lv, Guangquan;
Ding, Rongrong;
Yu, Taiyong

Publication type:

Article

Primary pulmonary malignant melanoma with H3K27Me3 loss: A case report.

Published in:

2025

By:

Li, Houqiang;
Zheng, Lanqing;
Yu, Xunbin;
Chen, Linfeng;
Lv, Shanshan;
Chen, Xin

Publication type:

Case Study

Whole Genome Assembly, Annotation, and Comparative Genomic Analysis of Pandanus amaryllifolius.

Published in:

Plant Molecular Biology Reporter, 2025, v. 43, n. 2, p. 910, doi. 10.1007/s11105-024-01522-w

By:

Sidek, Norhafizah;
Tan, Boon Chin;
Mebus, Katharina;
Kikuchi, Shinji;
Teo, Chee How

Publication type:

Article

Analysis of clonal evolution in cancer: A computational perspective.

Published in:

Journal of Bioinformatics & Computational Biology, 2025, v. 23, n. 2, p. 1, doi. 10.1142/S0219720025310018

By:

Ribeiro, Paulo Henrique;
Simao, Adenilso

Publication type:

Article

Ancient genomes reveal the genetic structure and population interaction in the Central Plains of China during the Eastern Zhou Period.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1602625

By:

Wu, Xiyan;
Liu, Pengxiang;
Yan, Fei;
Jin, RongPeng;
Zhong, Canshuo;
Wang, Lin;
Chen, Ke;
Yang, Fan;
Nie, Linyi;
Liang, Jinteng;
Zhou, Yawei;
Ding, Baoxu

Publication type:

Article

Genomic insights into Kocuria : taxonomic revision and identification of five IAA-producing extremophiles.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1547983

By:

Li, Cong-Jian;
Jiang, Zhu-Ming;
Zhi, Xiao-Yang;
Chen, Hua-Hong;
Yu, Li-Yan;
Li, Guang-Fu;
Zhang, Yu-Qin

Publication type:

Article

Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications.

Published in:

AMB Express, 2025, v. 15, n. 1, p. 1, doi. 10.1186/s13568-025-01894-6

By:

Gallardo-Camarena, Marco V.;
Reverchon, Frédérique;
Méndez-Bravo, Alfonso;
Torres-Acosta, Mario A.;
Licona-Cassani, Cuauhtémoc

Publication type:

Article

Genomic Analysis Suggests That Mitonuclear Coevolution Proceeds Over Rapid Timescales in the Amazonian Pipra Manakin Complex.

Published in:

Molecular Ecology, 2025, v. 34, n. 12, p. 1, doi. 10.1111/mec.17802

By:

Nikelski, Ellen;
Weir, Jason T.

Publication type:

Article

SARS-COV-2 mutations in North Rift, Kenya.

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0325133

By:

Mbogori, Elius;
Thiongo, Kelvin;
Deng, Harrison Yunying;
Gikunyu, Caroline Wangui;
Cheriro, Winfrida;
Musyoki, Stanslaus;
Biegon, Richard;
Matoke-Muhia, Damaris;
Patel, Kirtika;
Liang, Binhua;
Songok, Elijah

Publication type:

Article

Two novel polyvalent phages: a promising approach for cross-order pathogen control in aquaculture.

Published in:

Virology Journal, 2025, v. 22, n. 1, p. 1, doi. 10.1186/s12985-025-02817-4

By:

Li, Chengcheng;
Yue, Yufei;
Yin, Rui;
Zhao, Jiulong;
Wang, Zengmeng;
Nair, Shailesh;
Zhang, Yongyu

Publication type:

Article

Genomic landscape of nosocomial Acinetobacter baumannii: A comprehensive analysis of the resistome, virulome, and mobilome.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-03246-7

By:

Pearl, Sara;
Anbarasu, Anand

Publication type:

Article

Variabilidad genética, estrés oxidativo e inflamación en poblaciones colombianas.

Published in:

Biomédica: Revista del Instituto Nacional de Salud, 2025, v. 45, n. 2, p. 244, doi. 10.7705/biomedica.7220

By:

Nicole Banguera, Dayan;
Giovanna Mejía, Lizeth;
Ramírez-Montano, Diana;
Perenguez-Verdugo, Marcela;
Castillo, Andrés

Publication type:

Article

Pairing between homologous sequences on the X and chromosome 3 in Drosophila male meiosis.

Published in:

Genetics, 2025, v. 230, n. 2, p. 1, doi. 10.1093/genetics/iyaf059

By:

Hylton, Christopher A;
Hansen, Katie;
Dean, John E Tomkiel

Publication type:

Article

Nature vs nurture.

Published in:

Dental Nursing, 2025, v. 21, n. 6, p. 294, doi. 10.12968/denn.2025.21.6.294

By:

Sultan, Michael

Publication type:

Article

Enhancing the discriminatory power of polygenic scores for ADHD and autism in clinical and non-clinical samples.

Published in:

Journal of Neurodevelopmental Disorders, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s11689-025-09620-w

By:

Li, James J.;
He, Quanfa;
Dorn, Stephen;
Wang, Zihang;
Lu, Qiongshi

Publication type:

Article

Transcriptional characterization of sepsis in a LPS porcine model.

Published in:

Molecular Genetics & Genomics, 2025, v. 300, n. 1, p. 1, doi. 10.1007/s00438-025-02261-7

By:

Neill, Ryan

Publication type:

Article

Intervention of machine learning in bladder cancer research using multi-omics datasets: systematic review on biomarker identification.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02734-6

By:

Kiruba, Blessy;
Narayan, P. S. Athul;
Raj, Badhari;
Raj, S. Rohieth;
Mathew, Sam George;
Lulu, Sudhakaran Sajitha;
Sundararajan, Vino

Publication type:

Article

利用全基因組定序技術揭示臺灣商用紅羽土雞的族群遺傳結構.

Published in:

Journal of the Chinese Society of Animal Science, 2024, v. 53, p. 223

By:

蕭雅芠;
魏恆巍;
蘇剛毅;
薛建智;
何玉珍;
楊泠泠;
王淑音;
張啟聖

Publication type:

Article

Transcriptomic Profiles and Functional Correlates of Cancer‐Related Fatigue: A Cross‐Sectional Study in Women Undergoing Cancer Treatment.

Published in:

European Journal of Cancer Care, 2025, v. 2025, p. 1, doi. 10.1155/ecc/1092518

By:

Kleckner, Amber S.;
Mocci, Evelina;
Clingan, Carin L.;
Youngblood, Shari M.;
Rosenblatt, Paula Y.;
Tkaczuk, Katherine H. R.;
Kleckner, Ian R.;
Dorsey, Susan G.;
Sahgal, Pranshu

Publication type:

Article

Identification of a Risk Allele at SLC41A3 and a Protective Allele HLA-DPB1*02:01 Associated with Sarcopenia in Japanese.

Published in:

Gerontology, 2025, v. 71, n. 5, p. 376, doi. 10.1159/000545298

By:

Furutani, Motoki;
Kimura, Tetsuaki;
Fukunaga, Koya;
Suganuma, Mutsumi;
Takemura, Marie;
Matsui, Yasumoto;
Satake, Shosuke;
Nakano, Yukiko;
Mushiroda, Taisei;
Niida, Shumpei;
Ozaki, Kouichi;
Hosoyama, Tohru;
Shigemizu, Daichi

Publication type:

Article

Building Nucleosome Positioning Maps: Discovering Hidden Gems.

Published in:

WIREs: Computational Molecular Science, 2025, v. 15, n. 3, p. 1, doi. 10.1002/wcms.70029

By:

Masoudi‐Sobhanzadeh, Yosef;
Rahman, Anisur;
Li, Shuxiang;
Bazmi, Saman;
Kumar, Sushant;
Panchenko, Anna R.

Publication type:

Article

FM3VCF: A software library for accelerating the loading of large VCF files in genotype data analyses.

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0324430

By:

Zuo, Zhen;
Li, Mingliang;
Li, Qi;
Li, Zhuo;
Liu, Defu;
Ye, Guanshi;
Tang, You

Publication type:

Article

Investigating Determinants of Pathogenicity of Carbapenemase–Producing Enterobacterales.

Published in:

2025

By:

Temkin, Elizabeth;
Carmeli, Yehuda

Publication type:

Letter to the Editor

Genomic Epidemiology of Fluoroquinolone-Resistant Strains of Shigella sonnei and Shigella flexneri in the Iberian Peninsula From 2015 to 2022.

Published in:

Journal of Infectious Diseases, 2025, v. 231, n. 5, p. 1176, doi. 10.1093/infdis/jiae596

By:

Jacqueline, Camille;
Minetti, Corrado;
Fernandez, Sara Monzon;
Silveira, Leonor;
Plaza, Isabel Cuesta De La;
Pista, Ângela;
Herrera-Leon, Silvia

Publication type:

Article

Genomic Analysis of Global Mycobacterium abscessus Isolates Reveals Ongoing Evolution of Drug Resistance–Associated Genes.

Published in:

Journal of Infectious Diseases, 2025, v. 231, n. 5, p. 1150, doi. 10.1093/infdis/jiae580

By:

Yang, Tingting;
Beach, Kylie E;
Zhu, Chendi;
Gan, Mingyu;
Wang, Wenli;
Zhou, Hongjuan;
Peng, Lijun;
Wang, Shanshan;
Cai, Long;
Li, Weimin;
Davis, Jordan B;
Cicchetti, Nico;
Slechta, E Susan;
Barker, Adam;
Shakir, Salika M;
Carey, Allison F;
Liu, Qingyun

Publication type:

Article

The added value of metagenomic next-generation sequencing in central nervous system infections: a systematic review of case reports.

Published in:

Infection, 2025, v. 53, n. 3, p. 831, doi. 10.1007/s15010-025-02502-2

By:

Birkeland, Kira Waagner;
Mostert, Laurence;
Claas, Eric C.J.;
Aamot, Hege Vangstein;
Demuyser, Thomas

Publication type:

Article

Targeted next-generation sequencing - a promising approach in the diagnosis of Mycobacterium tuberculosis and drug resistance.

Published in:

Infection, 2025, v. 53, n. 3, p. 967, doi. 10.1007/s15010-024-02411-w

By:

Wu, Xiaocui;
Tan, Guangkun;
Sun, Chunlei;
Wang, Yang;
Yang, Jinghui;
Wu, Chunqiu;
Hu, Chaohui;
Yu, Fangyou

Publication type:

Article

Host-parasite coevolution leads to underwater respiratory adaptations in extreme diving insects, seal lice (Lepidophthirus macrorhini).

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08306-2

By:

Leonardi, María Soledad;
Latorre-Estivalis, Jose M.;
Crespo, José E.;
da Rocha Fernandes, Gabriel;
Schwaha, Thomas;
Blüml, Valentin;
Ebmer, David;
Soto, Florencia A.;
Olivera, Paula;
Lazzari, Claudio R.

Publication type:

Article

The PeachSNP170K array facilitates insights into a large-scale population relatedness and genetic impacts on citrate content and flowering time.

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08144-2

By:

Xu, Yaoguang;
Yu, Yang;
Qi, Xinpeng;
Zhang, Qi;
Guan, Jiantao;
Zhang, Zhengquan;
Wei, Jianhua;
Xie, Hua

Publication type:

Article

Isolation and characterization of methicillin-resistant Staphylococcus aureus phage SPB against MRSA planktonic cells and biofilm.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1554182

By:

Ma, Lan;
Liu, Yingyu;
Zheng, Xiaofeng;
Zheng, Baili;
Cheng, Yaling;
Cai, Yuxuan;
Li, Yongchao;
Zhang, Wei

Publication type:

Article

A novel oncogene, leucine-rich repeat protein 1, mediates hypoxia-induced hepatocellular carcinoma progression.

Published in:

Functional & Integrative Genomics, 2025, v. 25, n. 1, p. 1, doi. 10.1007/s10142-025-01626-w

By:

Tao, Li;
Guo, Yixian;
Liu, Runkun;
Lv, Meng;
Wang, Yufeng

Publication type:

Article

Chromosome-level genome assembly and anticoagulant protein annotation of the buffalo leech Hirudinaria bpling (Hirudinea: Hirudinidae).

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11690-y

By:

Khan, Muhammad Salabat;
Müller, Christian;
Zhou, Baozhen

Publication type:

Article

5 个猪种 DKK2 基因结构变异 DKK2-I1-sv89 的多态性研究.

Published in:

Journal of Henan Agricultural Sciences, 2025, v. 54, n. 4, p. 129, doi. 10.15933/j.cnki.1004-3268.2025.04.013

By:

龙菊烟;
卢圣菲;
田姣;
牛熙;
陈霞;
黄世会;
冉雪琴;
王嘉福

Publication type:

Article

Genomic landscape and homologous recombination repair deficiency signature in stage I-III and de novo stage IV primary breast cancers.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyaf089

By:

Jeon, June E;
Chen, Kuei-Ting;
Madison, Russell;
Schrock, Alexa B;
Sokol, Ethan;
Levy, Mia A;
Rozenblit, Mariya;
Huang, Richard S P;
Pusztai, Lajos

Publication type:

Article