Works matching DE "BACTERIAL RNA"

Results: 293

The conserved noncoding RNA ModT coordinates growth and virulence in Clostridioides difficile.

Published in:

PLoS Biology, 2024, v. 22, n. 12, p. 1, doi. 10.1371/journal.pbio.3002948

By:

Lenče, Tina;
Sulzer, Johannes;
Andress, Kilian;
Gribling-Burrer, Anne-Sophie;
Lamm-Schmidt, Vanessa;
Barquist, Lars;
Smyth, Redmond P.;
Faber, Franziska

Publication type:

Article

Pseudomonas sihuiensis sp. nov., isolated from a forest soil in South China.

Published in:

Antonie van Leeuwenhoek, 2014, v. 105, n. 4, p. 781, doi. 10.1007/s10482-014-0134-3

By:

Wu, Min;
Wen, Junlin;
Chang, Ming;
Yang, Guiqin;
Zhou, Shungui

Publication type:

Article

Zhizhongheella caldifontis gen. nov., sp. nov., a novel member of the family Comamonadaceae.

Published in:

Antonie van Leeuwenhoek, 2014, v. 105, n. 4, p. 755, doi. 10.1007/s10482-014-0131-6

By:

Dong, Lei;
Ming, Hong;
Liu, Lan;
Zhou, En-Min;
Yin, Yi-Rui;
Duan, Yan-Yan;
Nie, Guo-Xing;
Feng, Hui-Geng;
Li, Wen-Jun

Publication type:

Article

Roseovarius gaetbuli sp. nov., a novel alphaproteobacterium isolated from a tidal flat sediment.

Published in:

Antonie van Leeuwenhoek, 2014, v. 105, n. 4, p. 723, doi. 10.1007/s10482-014-0127-2

By:

Park, Sooyeon;
Park, Ja-Min;
Kang, Chul-Hyung;
Yoon, Jung-Hoon

Publication type:

Article

Roseovarius albus sp. nov., a new Alphaproteobacterium isolated from the Mediterranean Sea.

Published in:

Antonie van Leeuwenhoek, 2014, v. 105, n. 4, p. 671, doi. 10.1007/s10482-014-0121-8

By:

Lucena, Teresa;
Ruvira, María;
Macián, M.;
Pujalte, María;
Arahal, David

Publication type:

Article

Pseudoxanthomonas gei sp. nov., a novel endophytic bacterium isolated from the stem of Geum aleppicum.

Published in:

Antonie van Leeuwenhoek, 2014, v. 105, n. 4, p. 653, doi. 10.1007/s10482-014-0119-2

By:

Zhang, Lei;
Wei, Linfang;
Zhu, Lingfang;
Li, Changfu;
Wang, Yao;
Shen, Xihui

Publication type:

Article

NAD captureSeq indicates NAD as a bacterial cap for a subset of regulatory RNAs.

Published in:

Nature, 2015, v. 519, n. 7543, p. 374, doi. 10.1038/nature14020

By:

Cahová, Hana;
Winz, Marie-Luise;
Höfer, Katharina;
Nübel, Gabriele;
Jäschke, Andres

Publication type:

Article

Effect of 8-Oxo-1,N<sup>6</sup>-Ethenoadenine Derivatives on the Activity of RNA Polymerases from SARS-CoV-2 and Escherichia coli.

Published in:

Biochemistry (00062979), 2024, v. 89, n. 12/13, p. 2263, doi. 10.1134/S0006297924120149

By:

Petushkov, Ivan V.;
Aralov, Andrey V.;
Ivanov, Igor A.;
Baranov, Mikhail S.;
Zatsepin, Timofey S.;
Kulbachinskiy, Andrey V.

Publication type:

Article

Advances in engineered trans-acting regulatory RNAs and their application in bacterial genome engineering.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 6, p. 819, doi. 10.1007/s10295-019-02160-y

By:

Ahmed, Waqas;
Hafeez, Mian Abdul;
Ahmed, Rais

Publication type:

Article

Discovery, properties, and biosynthesis of pseudouridimycin, an antibacterial nucleoside-analog inhibitor of bacterial RNA polymerase.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 3/4, p. 335, doi. 10.1007/s10295-018-2109-2

By:

Maffioli, Sonia I.;
Sosio, Margherita;
Ebright, Richard H.;
Donadio, Stefano

Publication type:

Article

An Optimized Workflow for the Discovery of New Antimicrobial Compounds Targeting Bacterial RNA Polymerase Complex Formation.

Published in:

Antibiotics (2079-6382), 2022, v. 11, n. 10, p. N.PAG, doi. 10.3390/antibiotics11101449

By:

Caputo, Alessia;
Sartini, Sara;
Levati, Elisabetta;
Minato, Ilaria;
Elisi, Gian Marco;
Di Stasi, Adriana;
Guillou, Catherine;
Goekjian, Peter G.;
Garcia, Pierre;
Gueyrard, David;
Bach, Stéphane;
Comte, Arnaud;
Ottonello, Simone;
Rivara, Silvia;
Montanini, Barbara

Publication type:

Article

A Riboswitch-Driven Era of New Antibacterials.

Published in:

Antibiotics (2079-6382), 2022, v. 11, n. 9, p. 1243, doi. 10.3390/antibiotics11091243

By:

Giarimoglou, Nikoleta;
Kouvela, Adamantia;
Maniatis, Alexandros;
Papakyriakou, Athanasios;
Zhang, Jinwei;
Stamatopoulou, Vassiliki;
Stathopoulos, Constantinos

Publication type:

Article

Staphylococcus aureus RnpA Inhibitors: Computational-Guided Design, Synthesis and Initial Biological Evaluation.

Published in:

Antibiotics (2079-6382), 2021, v. 10, n. 4, p. 438, doi. 10.3390/antibiotics10040438

By:

Suigo, Lorenzo;
Chojnacki, Michaelle;
Zanotto, Carlo;
Sebastián-Pérez, Victor;
Morghen, Carlo De Giuli;
Casiraghi, Andrea;
Dunman, Paul M.;
Valoti, Ermanno;
Straniero, Valentina

Publication type:

Article

Novel Aspects of Polynucleotide Phosphorylase Function in Streptomyces.

Published in:

Antibiotics (2079-6382), 2018, v. 7, n. 1, p. 25, doi. 10.3390/antibiotics7010025

By:

Jones, George H.

Publication type:

Article

Preclinical Development of a Novel Zika Virus-like Particle Vaccine in Combination with Tetravalent Dengue Virus-like Particle Vaccines.

Published in:

Vaccines, 2024, v. 12, n. 9, p. 1053, doi. 10.3390/vaccines12091053

By:

Rothen, Dominik A.;
Dutta, Sudip Kumar;
Krenger, Pascal S.;
Pardini, Alessandro;
Vogt, Anne-Cathrine S.;
Josi, Romano;
Lieknina, Ilva;
Osterhaus, Albert D. M. E.;
Mohsen, Mona O.;
Vogel, Monique;
Martina, Byron;
Tars, Kaspars;
Bachmann, Martin F.

Publication type:

Article

ارزیابی بیان ژنهای اکسیدکنندۀ آهن و گوگرد در باکتری سولفوباسیلوس ترموسولفیدواکسیدانس تحتتأثیر شاخصهای مؤثر در فرایند آبشویۀ میکروبی.

Published in:

Biological Journal of Microorganism, 2020, v. 9, n. 35, p. 17, doi. 10.22108/BJM.2020.120297.1246

By:

کووووورر حورمحا&;
فووورخ رخبخوووم;
احاوووود م ووووو;
محاووود هاشووو آ

Publication type:

Article

Molecular diagnosis of Strongyloides stercoralis among transplant candidates.

Published in:

Transplant Infectious Disease, 2018, v. 20, n. 4, p. 1, doi. 10.1111/tid.12909

By:

Paula, Fabiana M.;
Malta, Fernanda M.;
Marques, Priscilla D.;
Melo, Gessica B.;
Corral, Marcelo A.;
Gottardi, Maiara;
Pinho, João R. R.;
Gonçalves, Elenice M. N.;
Castilho, Vera L. P.;
Pierrotti, Ligia C.;
Abdala, Edson;
Costa, Silvia F.;
Chieffi, Pedro P.;
Gryschek, Ronaldo C. B.

Publication type:

Article

Engineering RNA polymerase to construct biotechnological host strains of cyanobacteria.

Published in:

Physiologia Plantarum, 2024, v. 176, n. 2, p. 1, doi. 10.1111/ppl.14263

By:

Turunen, Otso;
Saleem, Tayyab;
Kurkela, Juha;
Kallio, Pauli;
Tyystjärvi, Taina

Publication type:

Article

Real-Time Assessment of Intracellular Metabolites in Single Cells through RNA-Based Sensors.

Published in:

Biomolecules (2218-273X), 2023, v. 13, n. 5, p. 765, doi. 10.3390/biom13050765

By:

Ortega, Alvaro Darío

Publication type:

Article

Host A-to-I RNA editing signatures in intracellular bacterial and single-strand RNA viral infections.

Published in:

Frontiers in Immunology, 2023, v. 14, p. 01, doi. 10.3389/fimmu.2023.1121096

By:

Zhi-Yuan Wei;
Zhi-Xin Wang;
Jia-Huan Li;
Yan-Shuo Wen;
Di Gao;
Shou-Yue Xia;
Yu-Ning Li;
Xu-Bin Pan;
Yan-Shan Liu;
Yun-Yun Jin;
Jian-Huan Chen

Publication type:

Article

Bacteroides fragilis outer membrane vesicles preferentially activate innate immune receptors compared to their parent bacteria.

Published in:

Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.970725

By:

Gilmore, William J.;
Johnston, Ella L.;
Bitto, Natalie J.;
Zavan, Lauren;
O'Brien-Simpson, Neil;
Hill, Andrew F.;
Kaparakis-Liaskos, Maria

Publication type:

Article

Bacteroides fragilis outer membrane vesicles preferentially activate innate immune receptors compared to their parent bacteria.

Published in:

Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.970725

By:

Gilmore, William J.;
Johnston, Ella L.;
Bitto, Natalie J.;
Zavan, Lauren;
O'Brien-Simpson, Neil;
Hill, Andrew F.;
Kaparakis-Liaskos, Maria

Publication type:

Article

High‐risk Stage III colon cancer patients identified by a novel five‐gene mutational signature are characterized by upregulation of IL‐23A and gut bacterial translocation of the tumor microenvironment.

Published in:

International Journal of Cancer, 2020, v. 146, n. 7, p. 2027, doi. 10.1002/ijc.32775

By:

Ge, Weiting;
Hu, Hanguang;
Cai, Wen;
Xu, Jinhong;
Hu, Wangxiong;
Weng, Xingyue;
Qin, Xin;
Huang, Yanqin;
Han, Weidong;
Hu, Yeting;
Yu, Jiekai;
Zhang, Wufeng;
Ye, Sisi;
Qi, Lina;
Huang, Pingjie;
Chen, Lirong;
Ding, Kefeng;
Wang, Li Dong;
Zheng, Shu

Publication type:

Article

Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32079-5

By:

Lisitskaya, Lidiya;
Shin, Yeonoh;
Agapov, Aleksei;
Olina, Anna;
Kropocheva, Ekaterina;
Ryazansky, Sergei;
Aravin, Alexei A.;
Esyunina, Daria;
Murakami, Katsuhiko S.;
Kulbachinskiy, Andrey

Publication type:

Article

Author Correction: Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity.

Published in:

2022

By:

Lisitskaya, Lidiya;
Shin, Yeonoh;
Agapov, Aleksei;
Olina, Anna;
Kropocheva, Ekaterina;
Ryazansky, Sergei;
Aravin, Alexei A.;
Esyunina, Daria;
Murakami, Katsuhiko S.;
Kulbachinskiy, Andrey

Publication type:

Correction Notice

Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32079-5

By:

Lisitskaya, Lidiya;
Shin, Yeonoh;
Agapov, Aleksei;
Olina, Anna;
Kropocheva, Ekaterina;
Ryazansky, Sergei;
Aravin, Alexei A.;
Esyunina, Daria;
Murakami, Katsuhiko S.;
Kulbachinskiy, Andrey

Publication type:

Article

Modulation of Bacterial sRNAs Activity by Epigenetic Modifications: Inputs from the Eukaryotic miRNAs.

Published in:

Genes, 2019, v. 10, n. 1, p. 22, doi. 10.3390/genes10010022

By:

Felden, Brice;
Gilot, David

Publication type:

Article

The Tangled Tree: A Radical New History of Life.

Published in:

Journal of the Association of Genetic Technologists, 2020, v. 46, n. 2, p. 104

By:

Lawce, Helen

Publication type:

Article

Gut microbiota profiles in feces and paired tumor and non-tumor tissues from Colorectal Cancer patients. Relationship to the Body Mass Index.

Published in:

PLoS ONE, 2023, v. 18, n. 10, p. 1, doi. 10.1371/journal.pone.0292551

By:

Tesolato, Sofía;
Ortega-Hernández, Adriana;
Gómez-Garre, Dulcenombre;
Claver, Paula;
De Juan, Carmen;
De la Serna, Sofía;
Paz, Mateo;
Domínguez-Serrano, Inmaculada;
Dziakova, Jana;
Rivera, Daniel;
Torres, Antonio;
Iniesta, Pilar

Publication type:

Article

Chronic osteoarthritis caused by Propionibacterium australiense infection in a captive sand gazelle.

Published in:

Journal of Veterinary Diagnostic Investigation, 2024, v. 36, n. 6, p. 816, doi. 10.1177/10406387241263329

By:

King, Emily M.;
Wilson, James M.;
Hostnik, Eric T.;
Bapodra, Priya;
Junge, Randall E.;
Niehaus, Andrew J.;
Durgam, Sushmitha S.;
Schreeg, Megan E.

Publication type:

Article

Studies on Trueperella pyogenes isolated from an okapi (Okapia johnstoni) and a royal python (Python regius).

Published in:

BMC Veterinary Research, 2020, v. 16, p. 1, doi. 10.1186/s12917-020-02508-y

By:

Ahmed, Marwa F. E.;
Alssahen, Mazen;
Lämmler, Christoph;
Eisenberg, Tobias;
Plötz, Madeleine;
Abdulmawjood, Amir

Publication type:

Article

Application of CRISPR-Based Human and Bacterial Ribosomal RNA Depletion for SARS-CoV-2 Shotgun Metagenomic Sequencing.

Published in:

American Journal of Clinical Pathology, 2023, v. 159, n. 2, p. 111, doi. 10.1093/ajcp/aqac135

By:

Cerón, Stacey;
Clemons, Nathan C;
Bredow, Benjamin von;
Yang, Shangxin

Publication type:

Article

Distinctive Gut Microbiota Alteration Is Associated with Poststroke Functional Recovery: Results from a Prospective Cohort Study.

Published in:

Neural Plasticity, 2021, p. 1, doi. 10.1155/2021/1469339

By:

Dang, Yini;
Zhang, Xintong;
Zheng, Yu;
Yu, Binbin;
Pan, Dijia;
Jiang, Xiaomin;
Yan, Chengjie;
Yu, Qiuyu;
Lu, Xiao

Publication type:

Article

Opportunities for Riboswitch Inhibition by Targeting Co-Transcriptional RNA Folding Events.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 19, p. 10495, doi. 10.3390/ijms251910495

By:

Stephen, Christine;
Palmer, Danea;
Mishanina, Tatiana V.

Publication type:

Article

Extensive Expression of the Virulome Related to Antibiotic Genotyping in Nosocomial Strains of Klebsiella pneumoniae.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 19, p. 14754, doi. 10.3390/ijms241914754

By:

Paniagua-Contreras, Gloria Luz;
Bautista-Cerón, Areli;
Morales-Espinosa, Rosario;
Delgado, Gabriela;
Vaca-Paniagua, Felipe;
Díaz-Velásquez, Clara Estela;
de la Cruz-Montoya, Aldo Hugo;
García-Cortés, Luis Rey;
Sánchez-Yáñez, María Patricia;
Monroy-Pérez, Eric

Publication type:

Article

RNA Regulatory Networks 2.0.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 10, p. 9001, doi. 10.3390/ijms24109001

By:

Enguita, Francisco J.;
Leitão, Ana Lúcia;
Mattick, John S.

Publication type:

Article

Differences in Bacterial Small RNAs in Stool Samples from Hypercholesterolemic and Normocholesterolemic Subjects.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 8, p. 7213, doi. 10.3390/ijms24087213

By:

Morales, Cristian;
Arias-Carrasco, Raul;
Maracaja-Coutinho, Vinicius;
Seron, Pamela;
Lanas, Fernando;
Salazar, Luis A.;
Saavedra, Nicolás

Publication type:

Article

Ligand-Based Drug Design of Novel Antimicrobials against Staphylococcus aureus by Targeting Bacterial Transcription.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 1, p. 339, doi. 10.3390/ijms24010339

By:

Ye, Jiqing;
Yang, Xiao;
Ma, Cong

Publication type:

Article

Antibacterial Peptide NP-6 Affects Staphylococcus aureus by Multiple Modes of Action.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 14, p. 7812, doi. 10.3390/ijms23147812

By:

Hou, Xiaoyan;
Li, Jianlong;
Tang, Huaqiao;
Li, Qingye;
Shen, Guanghui;
Li, Shanshan;
Chen, Anjun;
Peng, Zixin;
Zhang, Yu;
Li, Chaowei;
Zhang, Zhiqing

Publication type:

Article

Close Related Drug-Resistance Beijing Isolates of Mycobacterium tuberculosis Reveal a Different Transcriptomic Signature in a Murine Disease Progression Model.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 9, p. 5157, doi. 10.3390/ijms23095157

By:

Cerezo-Cortés, María Irene;
Rodríguez-Castillo, Juan Germán;
Mata-Espinosa, Dulce Adriana;
Bini, Estela Isabel;
Barrios-Payan, Jorge;
Zatarain-Barrón, Zyanya Lucia;
Anzola, Juan Manuel;
Cornejo-Granados, Fernanda;
Ochoa-Leyva, Adrian;
Del Portillo, Patricia;
Murcia, Martha Isabel;
Hernández-Pando, Rogelio

Publication type:

Article

The Plasmid pEX18Gm Indirectly Increases Caenorhabditis elegans Fecundity by Accelerating Bacterial Methionine Synthesis.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 9, p. 5003, doi. 10.3390/ijms23095003

By:

Guo, Rui;
Li, Gen;
Lu, Leilei;
Sun, Shan;
Liu, Ting;
Li, Mengsha;
Zheng, Yong;
Walhout, Albertha J. M.;
Wu, Jun;
Li, Huixin

Publication type:

Article

Merging the Versatile Functionalities of Boronic Acid with Peptides.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 23, p. 12958, doi. 10.3390/ijms222312958

By:

Tan, Yahong;
Wu, Junjie;
Song, Lulu;
Zhang, Mengmeng;
Hipolito, Christopher John;
Wu, Changsheng;
Wang, Siyuan;
Zhang, Youming;
Yin, Yizhen

Publication type:

Article

A Novel Non-Coding RNA CsiR Regulates the Ciprofloxacin Resistance in Proteus vulgaris by Interacting with emrB mRNA.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 19, p. 10627, doi. 10.3390/ijms221910627

By:

Zhang, Hongyang;
Song, Tongzhen;
Qin, Chuhan;
Xu, Haijin;
Qiao, Mingqiang

Publication type:

Article

Differential Chromosome- and Plasmid-Borne Resistance of Escherichia coli hfq Mutants to High Concentrations of Various Antibiotics.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 16, p. 8886, doi. 10.3390/ijms22168886

By:

Gaffke, Lidia;
Kubiak, Krzysztof;
Cyske, Zuzanna;
Węgrzyn, Grzegorz

Publication type:

Article

Extracytoplasmic Function σ Factors as Tools for Coordinating Stress Responses.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 8, p. 3900, doi. 10.3390/ijms22083900

By:

de Dios, Rubén;
Santero, Eduardo;
Reyes-Ramírez, Francisca

Publication type:

Article

Extracellular RNAs in Bacterial Infections: From Emerging Key Players on Host-Pathogen Interactions to Exploitable Biomarkers and Therapeutic Targets.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 24, p. 9634, doi. 10.3390/ijms21249634

By:

Pita, Tiago;
Feliciano, Joana R.;
Leitão, Jorge H.

Publication type:

Article

RNA-Sequencing Analyses of Small Bacterial RNAs and their Emergence as Virulence Factors in Host-Pathogen Interactions.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 5, p. 1627, doi. 10.3390/ijms21051627

By:

Diallo, Idrissa;
Provost, Patrick

Publication type:

Article

The modular architecture of sigma factors in cyanobacteria: a framework to assess their diversity and understand their evolution.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10415-x

By:

Gevin, Marine;
Latifi, Amel;
Talla, Emmanuel

Publication type:

Article

Reflections on an inflection: From virology to parasitology guided by POLARIS.

Published in:

PLoS Pathogens, 2018, v. 14, n. 6, p. 1, doi. 10.1371/journal.ppat.1006941

By:

Vaidya, Akhil B.

Publication type:

Article

A Two-State Model for the Dynamics of the Pyrophosphate Ion Release in Bacterial RNA Polymerase.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 4, p. 1, doi. 10.1371/journal.pcbi.1003020

By:

Da, Lin-Tai;
Avila, Fátima Pardo;
Wang, Dong;
Huang, Xuhui

Publication type:

Article