Works matching DE "RETROTRANSPOSONS"

Results: 931

miR-128 represses L1 retrotransposition by binding directly to L1 RNA.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 10, p. 824, doi. 10.1038/nsmb.3090

By:

Hamdorf, Matthias;
Idica, Adam;
Zisoulis, Dimitrios G;
Gamelin, Lindsay;
Martin, Charles;
Sanders, Katie J;
Pedersen, Irene M

Publication type:

Article

The Microprocessor controls the activity of mammalian retrotransposons.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1173, doi. 10.1038/nsmb.2658

By:

Heras, Sara R;
Macias, Sara;
Plass, Mireya;
Fernandez, Noemí;
Cano, David;
Eyras, Eduardo;
Garcia-Perez, José L;
Cáceres, Javier F

Publication type:

Article

Chromatin signatures and retrotransposon profiling in mouse embryos reveal regulation of LINE-1 by RNA.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 3, p. 332, doi. 10.1038/nsmb.2495

By:

Fadloun, Anas;
Le Gras, Stéphanie;
Jost, Bernard;
Ziegler-Birling, Céline;
Takahashi, Hazuki;
Gorab, Eduardo;
Carninci, Piero;
Torres-Padilla, Maria-Elena

Publication type:

Article

Trim24-repressed VL30 retrotransposons regulate gene expression by producing noncoding RNA.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 3, p. 339, doi. 10.1038/nsmb.2496

By:

Herquel, Benjamin;
Ouararhni, Khalid;
Martianov, Igor;
Le Gras, Stéphanie;
Ye, Tao;
Keime, Céline;
Lerouge, Thierry;
Jost, Bernard;
Cammas, Florence;
Losson, Régine;
Davidson, Irwin

Publication type:

Article

Capsid transfer of the retrotransposon Copia controls structural synaptic plasticity in Drosophila.

Published in:

PLoS Biology, 2025, v. 23, n. 2, p. 1, doi. 10.1371/journal.pbio.3002983

By:

M'Angale, P. Githure;
Lemieux, Adrienne;
Liu, Yumeng;
Wang, Shuhao;
Zinter, Max;
Alegre, Gimena;
Simkin, Alfred;
Budnik, Vivian;
Kelch, Brian A.;
Thomson, Travis

Publication type:

Article

Spliced integrated retrotransposed element (SpIRE) formation in the human genome.

Published in:

PLoS Biology, 2018, v. 16, n. 3, p. 1, doi. 10.1371/journal.pbio.2003067

By:

Larson, Peter A.;
Moldovan, John B.;
Jasti, Naveen;
Kidd, Jeffrey M.;
Beck, Christine R.;
Moran, John V.

Publication type:

Article

LTR retrotransposons and highly informative ISSRs in combination are potential markers for genetic fidelity testing of tissue culture-raised plants in sugarcane.

Published in:

Molecular Breeding, 2019, v. 39, n. 2, p. N.PAG, doi. 10.1007/s11032-019-0931-5

By:

Shingote, Prashant R.;
Amitha Mithra, S. V.;
Sharma, Pratima;
Devanna, Navadagi B.;
Arora, Kirti;
Holkar, Somnath K.;
Khan, Suhail;
Singh, J.;
Kumar, Sanjeev;
Sharma, T. R.;
Solanke, Amolkumar U.

Publication type:

Article

An LTR retrotransposon insertion was the cause of world's first low erucic acid Brassica rapa oilseed cultivar.

Published in:

Molecular Breeding, 2019, v. 39, n. 1, p. 1, doi. 10.1007/s11032-018-0916-9

By:

Fukai, Eigo;
Karim, Md. Masud;
Shea, Daniel J.;
Tonu, Nazmoon Naher;
Falk, Kevin C.;
Funaki, Taketo;
Okazaki, Keiichi

Publication type:

Article

The columnar mutation (' Co gene') of apple ( Malus × domestica) is associated with an integration of a Gypsy-like retrotransposon.

Published in:

Molecular Breeding, 2014, v. 33, n. 4, p. 863, doi. 10.1007/s11032-013-0001-3

By:

Otto, Dominik;
Petersen, Romina;
Brauksiepe, Bastienne;
Braun, Peter;
Schmidt, Erwin

Publication type:

Article

Development of DNA markers for identifying chrysanthemum cultivars generated by ion-beam irradiation.

Published in:

Molecular Breeding, 2013, v. 31, n. 3, p. 729, doi. 10.1007/s11032-012-9808-6

By:

Shirao, Tsukasa;
Ueno, Kei-ichiro;
Abe, Tomoko;
Matsuyama, Tomoki

Publication type:

Article

Unravelling genome dynamics in Arabidopsis synthetic auto and allopolyploid species.

Published in:

Biologia Plantarum, 2015, v. 59, n. 4, p. 661, doi. 10.1007/s10535-015-0536-8

By:

Bento, M.;
Tomás, D.;
Viegas, W.;
Silva, M.

Publication type:

Article

Correction to: Transposable Elements Activity is Positively Related to Rate of Speciation in Mammals.

Published in:

Journal of Molecular Evolution, 2018, v. 86, n. 5, p. 311, doi. 10.1007/s00239-018-9850-z

By:

Ricci, Marco;
Peona, Valentina;
Guichard, Etienne;
Taccioli, Cristian;
Boattini, Alessio

Publication type:

Article

The Distribution of Miniature Impala Elements and SIX Genes in the Fusarium Genus is Suggestive of Horizontal Gene Transfer.

Published in:

Journal of Molecular Evolution, 2017, v. 85, n. 1/2, p. 14, doi. 10.1007/s00239-017-9801-0

By:

van Dam, Peter;
Rep, Martijn

Publication type:

Article

Patterns of Evolutionary Trajectories and Domestication History within the Genus Hordeum Assessed by REMAP Markers.

Published in:

Journal of Molecular Evolution, 2017, v. 84, n. 2/3, p. 116, doi. 10.1007/s00239-016-9779-z

By:

Bonchev, Georgi;
Dusinský, Roman;
Hauptvogel, Pavol;
Švec, Miroslav

Publication type:

Article

Genomic Landscape of Long Terminal Repeat Retrotransposons (LTR-RTs) and Solo LTRs as Shaped by Ectopic Recombination in Chicken and Zebra Finch.

Published in:

Journal of Molecular Evolution, 2016, v. 82, n. 6, p. 251, doi. 10.1007/s00239-016-9741-0

By:

Ji, Yanzhu;
DeWoody, J. Andrew

Publication type:

Article

Low Levels of LTR Retrotransposon Deletion by Ectopic Recombination in the Gigantic Genomes of Salamanders.

Published in:

Journal of Molecular Evolution, 2015, v. 80, n. 2, p. 120, doi. 10.1007/s00239-014-9663-7

By:

Frahry, Matthew;
Sun, Cheng;
Chong, Rebecca;
Mueller, Rachel

Publication type:

Article

Abnormal DLK1/MEG3 imprinting correlates with decreased HERV-K methylation after assisted reproduction and preimplantation genetic diagnosis.

Published in:

Stress: The International Journal on the Biology of Stress, 2013, v. 16, n. 6, p. 689, doi. 10.3109/10253890.2013.817554

By:

Dimitriadou, Eftychia;
Noutsopoulos, Dimitrios;
Markopoulos, Georgios;
Vlaikou, Angeliki-Maria;
Mantziou, Stefania;
Traeger-Synodinos, Joanne;
Kanavakis, Emmanouel;
Chrousos, George P.;
Tzavaras, Theodore;
Syrrou, Maria

Publication type:

Article

An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons.

Published in:

Nature, 2014, v. 516, n. 7530, p. 242, doi. 10.1038/nature13760

By:

Jacobs, Frank M. J.;
Greenberg, David;
Nguyen, Ngan;
Haeussler, Maximilian;
Katzman, Sol;
Paten, Benedict;
Ewing, Adam D.;
Salama, Sofie R.;
Haussler, David

Publication type:

Article

Neuroscience: Hopping DNA linked to schizophrenia.

Published in:: Nature, 2014, v. 507, n. 7490, p. 11, doi. 10.1038/507011f
Publication type:: Article

Tnt1 retrotransposon as an efficient tool for development of an insertional mutant collection of Lotus japonicus.

Published in:

In Vitro Cellular & Developmental Biology Plant, 2016, v. 52, n. 3, p. 338, doi. 10.1007/s11627-016-9768-3

By:

Iantcheva, Anelia;
Revalska, Miglena;
Zehirov, Grigor;
Boycheva, Irina;
Magne, Kevin;
Radkova, Mariana;
Ratet, Pascal;
Vassileva, Valya

Publication type:

Article

Retrotransposons and Telomeres.

Published in:

Biochemistry (00062979), 2023, v. 88, n. 11, p. 1739, doi. 10.1134/S0006297923110068

By:

Kalmykova, Alla I.;
Sokolova, Olesya A.

Publication type:

Article

How to become your own worst enemy.

Published in:

Nature Immunology, 2013, v. 14, n. 4, p. 315, doi. 10.1038/ni.2571

By:

Voinnet, Olivier

Publication type:

Article

RNA-mediated interference and reverse transcription control the persistence of RNA viruses in the insect model Drosophila.

Published in:

Nature Immunology, 2013, v. 14, n. 4, p. 396, doi. 10.1038/ni.2542

By:

Goic, Bertsy;
Vodovar, Nicolas;
Mondotte, Juan A;
Monot, Clément;
Frangeul, Lionel;
Blanc, Hervé;
Gausson, Valérie;
Vera-Otarola, Jorge;
Cristofari, Gael;
Saleh, Maria-Carla

Publication type:

Article

Cancer cells, on your histone marks, get SET DB1, silence retrotransposons, and go!

Published in:

Journal of Cell Biology, 2017, v. 216, n. 11, p. 3429, doi. 10.1083/jcb.201710068

By:

Robbez-Masson, Luisa;
Tie, Christopher H. C.;
Rowe, Helen M.

Publication type:

Article

Silencing of retrotransposons by SET DB1 inhibits the interferon response in acute myeloid leukemia.

Published in:

Journal of Cell Biology, 2017, v. 216, n. 11, p. 3535, doi. 10.1083/jcb.201612160

By:

Cuellar, Trinna L.;
Herzner, Anna-Maria;
Xiaotian Zhang;
Goyal, Yogesh;
Watanabe, Colin;
Friedman, Brad A.;
Janakiraman, Vasantharajan;
Durinck, Steffen;
Stinson, Jeremy;
Arnott, David;
Cheung, Tommy K.;
Chaudhuri, Subhra;
Modrusan, Zora;
Doerr, Jonas Martin;
Classon, Marie;
Haley, Benjamin

Publication type:

Article

Coloring biology in grape skin: a prospective strategy for molecular farming.

Published in:

Physiologia Plantarum, 2018, v. 164, n. 4, p. 429, doi. 10.1111/ppl.12822

By:

Jinggui Fang;
Le Guan;
Xin Sun;
Jogaiah, Sudisha;
Abdelrahman, Mostafa

Publication type:

Article

Telomere Biology--Insights into an Intriguing Phenomenon.

Published in:

Cells (2073-4409), 2017, v. 6, n. 2, p. 15, doi. 10.3390/cells6020015

By:

Venkatesan, Shriram;
Khaw, Aik Kia;
Hande, Manoor Prakash

Publication type:

Article

What Can Long Terminal Repeats Tell Us About the Age of LTR Retrotransposons, Gene Conversion and Ectopic Recombination?

Published in:

Frontiers in Plant Science, 2020, v. 11, p. 1, doi. 10.3389/fpls.2020.00644

By:

Jedlicka, Pavel;
Lexa, Matej;
Kejnovsky, Eduard

Publication type:

Article

Loss of copy numbers of retrotransposons (HERVK) on chromosome 7p11.2 impacts EGFR (Epidermal Growth Factor Receptor)‐induced phenotypes for platinum sensitivity and long‐term survival in ovarian cancer—A study from the OVCAD consortium.

Published in:

International Journal of Cancer, 2024, v. 155, n. 5, p. 934, doi. 10.1002/ijc.34976

By:

Fromhage, Gesa;
Obermayr, Eva;
Bednarz‐Knoll, Natalia;
Van Gorp, Toon;
Welsch, Eva;
Polterauer, Stephan;
Braicu, Elena Ioana;
Mahner, Sven;
Sehouli, Jalid;
Vergote, Ignace;
Concin, Nicole;
Kurtz, Stefan;
Steinbiss, Sascha;
Torge, Antje;
Zeillinger, Robert;
Wölber, Linn;
Brandt, Burkhard

Publication type:

Article

Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39344-1

By:

Li, Zhengyi;
Xu, Haiyan;
Li, Jiaqun;
Xu, Xiao;
Wang, Junjiao;
Wu, Danya;
Zhang, Jiateng;
Liu, Juan;
Xue, Ziwei;
Zhan, Guankai;
Tan, Bobby Cheng Peow;
Chen, Di;
Chan, Yun-Shen;
Ng, Huck Hui;
Liu, Wanlu;
Hsu, Chih-Hung;
Zhang, Dan;
Shen, Yang;
Liang, Hongqing

Publication type:

Article

Template-jumping prime editing enables large insertion and exon rewriting in vivo.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39137-6

By:

Zheng, Chunwei;
Liu, Bin;
Dong, Xiaolong;
Gaston, Nicholas;
Sontheimer, Erik J.;
Xue, Wen

Publication type:

Article

MIR retrotransposons link the epigenome and the transcriptome of coding genes in acute myeloid leukemia.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34211-x

By:

Telonis, Aristeidis G.;
Yang, Qin;
Huang, Hsuan-Ting;
Figueroa, Maria E.

Publication type:

Article

Human reproduction is regulated by retrotransposons derived from ancient Hominidae-specific viral infections.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28105-1

By:

Xiang, Xinyu;
Tao, Yu;
DiRusso, Jonathan;
Hsu, Fei-Man;
Zhang, Jinchun;
Xue, Ziwei;
Pontis, Julien;
Trono, Didier;
Liu, Wanlu;
Clark, Amander T.

Publication type:

Article

Specific Patterns in Correlations of Super-Short Tandem Repeats (SSTRs) with G+C Content, Genic and Intergenic Regions, and Retrotransposons on All Human Chromosomes.

Published in:

Genes, 2024, v. 15, n. 1, p. 33, doi. 10.3390/genes15010033

By:

Henn, Lukas;
Sievers, Aaron;
Hausmann, Michael;
Hildenbrand, Georg

Publication type:

Article

Homoplasy of Retrotransposon Insertions in Toothed Whales.

Published in:

Genes, 2023, v. 14, n. 9, p. 1830, doi. 10.3390/genes14091830

By:

Doronina, Liliya;
Ogoniak, Lynn;
Schmitz, Jürgen

Publication type:

Article

Retrotransposon Insertion Polymorphisms (RIPs) in Pig Reproductive Candidate Genes.

Published in:

Genes, 2022, v. 13, n. 8, p. 1359, doi. 10.3390/genes13081359

By:

Du, Zhanyu;
D'Alessandro, Enrico;
Asare, Emmanuel;
Zheng, Yao;
Wang, Mengli;
Chen, Cai;
Wang, Xiaoyan;
Song, Chengyi

Publication type:

Article

Recently Integrated Alu Elements in Capuchin Monkeys: A Resource for Cebus / Sapajus Genomics.

Published in:

Genes, 2022, v. 13, n. 4, p. 572, doi. 10.3390/genes13040572

By:

Storer, Jessica M.;
Walker, Jerilyn A.;
Rockwell, Catherine E.;
Mores, Grayce;
Beckstrom, Thomas O.;
Orkin, Joseph D.;
Melin, Amanda D.;
Phillips, Kimberley A.;
Roos, Christian;
Batzer, Mark A.

Publication type:

Article

DARTS: An Algorithm for Domain-Associated Retrotransposon Search in Genome Assemblies.

Published in:

Genes, 2022, v. 13, n. 1, p. 9, doi. 10.3390/genes13010009

By:

Biryukov, Mikhail;
Ustyantsev, Kirill

Publication type:

Article

Factors Regulating the Activity of LINE1 Retrotransposons.

Published in:

Genes, 2021, v. 12, n. 10, p. 1562, doi. 10.3390/genes12101562

By:

Protasova, Maria Sergeevna;
Andreeva, Tatiana Vladimirovna;
Rogaev, Evgeny Ivanovich

Publication type:

Article

Suggested Absence of Horizontal Transfer of Retrotransposons between Humans and Domestic Mammal Species.

Published in:

Genes, 2021, v. 12, n. 8, p. 1223, doi. 10.3390/genes12081223

By:

Wanner, Nicole M.;
Faulk, Christopher

Publication type:

Article

Role of the Non-Canonical RNAi Pathway in the Antifungal Resistance and Virulence of Mucorales.

Published in:

Genes, 2021, v. 12, n. 4, p. 586, doi. 10.3390/genes12040586

By:

Cánovas-Márquez, José Tomás;
Navarro-Mendoza, María Isabel;
Pérez-Arques, Carlos;
Lax, Carlos;
Tahiri, Ghizlane;
Pérez-Ruiz, José Antonio;
Lorenzo-Gutiérrez, Damaris;
Calo, Silvia;
López-García, Sergio;
Navarro, Eusebio;
Nicolás, Francisco Esteban;
Garre, Victoriano;
Murcia, Laura

Publication type:

Article

A Survey of Transposon Landscapes in the Putative Ancient Asexual Ostracod Darwinula stevensoni.

Published in:

Genes, 2021, v. 12, n. 3, p. 401, doi. 10.3390/genes12030401

By:

Schön, Isa;
Rodriguez, Fernando;
Dunn, Matthew;
Martens, Koen;
Shribak, Michael;
Arkhipova, Irina R.;
Ivics, Zoltan

Publication type:

Article

InpactorDB: A Classified Lineage-Level Plant LTR Retrotransposon Reference Library for Free-Alignment Methods Based on Machine Learning.

Published in:

Genes, 2021, v. 12, n. 2, p. 190, doi. 10.3390/genes12020190

By:

Orozco-Arias, Simon;
Jaimes, Paula A.;
Candamil, Mariana S.;
Jiménez-Varón, Cristian Felipe;
Tabares-Soto, Reinel;
Isaza, Gustavo;
Guyot, Romain;
Grzebelus, Dariusz

Publication type:

Article

Existence of Bov-B LINE Retrotransposons in Snake Lineages Reveals Recent Multiple Horizontal Gene Transfers with Copy Number Variation.

Published in:

Genes, 2020, v. 11, n. 11, p. 1241, doi. 10.3390/genes11111241

By:

Puinongpo, Weerada;
Singchat, Worapong;
Petpradub, Supaporn;
Kraichak, Ekaphan;
Nunome, Mitsuo;
Laopichienpong, Nararat;
Thongchum, Ratchaphol;
Intarasorn, Thanphong;
Sillapaprayoon, Siwapech;
Indananda, Chantra;
Muangmai, Narongrit;
Suntrarachun, Sunutcha;
Baicharoen, Sudarath;
Chanhome, Lawan;
Peyachoknagul, Surin;
Srikulnath, Kornsorn

Publication type:

Article

R2 and Non-Site-Specific R2-Like Retrotransposons of the German Cockroach, Blattella germanica.

Published in:

Genes, 2020, v. 11, n. 10, p. 1202, doi. 10.3390/genes11101202

By:

Zagoskina, Arina;
Firsov, Sergei;
Lazebnaya, Irina;
Lazebny, Oleg;
Mukha, Dmitry V.

Publication type:

Article

The Genome of Blue-Capped Cordon-Bleu Uncovers Hidden Diversity of LTR Retrotransposons in Zebra Finch.

Published in:

Genes, 2019, v. 10, n. 4, p. 301, doi. 10.3390/genes10040301

By:

Boman, Jesper;
Frankl-Vilches, Carolina;
da Silva dos Santos, Michelly;
de Oliveira, Edivaldo H. C.;
Gahr, Manfred;
Suh, Alexander

Publication type:

Article

New Insights into Long Terminal Repeat Retrotransposons in Mulberry Species.

Published in:

Genes, 2019, v. 10, n. 4, p. 285, doi. 10.3390/genes10040285

By:

Ma, Bi;
Kuang, Lulu;
Xin, Youchao;
He, Ningjia

Publication type:

Article

Genome-Wide Identification and Analysis of High-Copy-Number LTR Retrotransposons in Asian Pears.

Published in:

Genes, 2019, v. 10, n. 2, p. 156, doi. 10.3390/genes10020156

By:

Jiang, Shuang;
Wang, Xiaoqing;
Shi, Chunhui;
Luo, Jun

Publication type:

Article

Specific LTR-Retrotransposons Show Copy Number Variations between Wild and Cultivated Sunflowers.

Published in:

Genes, 2018, v. 9, n. 9, p. 433, doi. 10.3390/genes9090433

By:

Mascagni, Flavia;
Vangelisti, Alberto;
Giordani, Tommaso;
Cavallini, Andrea;
Natali, Lucia

Publication type:

Article

TERribly Difficult: Searching for Telomerase RNAs in Saccharomycetes.

Published in:

Genes, 2018, v. 9, n. 8, p. 372, doi. 10.3390/genes9080372

By:

Waldl, Maria;
Thiel, Bernhard C.;
Ochsenreiter, Roman;
Wolfinger, Michael T.;
Stadler, Peter F.;
Holzenleiter, Alexander;
de Araujo Oliveira, João Victor;
Walter, Maria Emília M. T.

Publication type:

Article