Works matching DE "CHROMATIN"

Results: 5000

Chromatin remodeling in lymphocytic function and fate: the multifaceted roles of SWI/SNF complex.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1575857

By:

Miao, Renjie;
Liu, Yun;
Shen, Shuo;
Wang, Wenxin;
Wang, Shengjun

Publication type:

Article

Centromere-size reduction and chromatin state dynamics following intergenomic hybridization in cotton.

Published in:

PLoS Genetics, 2025, v. 21, n. 5, p. 1, doi. 10.1371/journal.pgen.1011689

By:

Han, Jinlei;
Hu, Guanjing;
Dai, Yan;
Zhang, Xin;
Tian, Jingjing;
Zhou, Jialiang;
Xu, Xinqi;
Chen, Qi;
Kou, Xiaobing;
Xu, Lei;
Wu, Xinyu;
Sun, Ziying;
Geng, Jiahui;
Li, Lin;
Qiu, Chenyu;
Mehari, Teame Gereziher;
Wang, Baohua;
Zhang, Hui;
Shen, Xinlian;
Xu, Zhenzhen

Publication type:

Article

The Role of Linker Histone Mutation in Oncogenesis: Molecular Mechanism and Structural Impact.

Published in:

Biocell, 2025, v. 49, n. 4, p. 519, doi. 10.32604/biocell.2025.061470

By:

Liu, Gege;
Zhang, Houfang;
Peng, Yunhui

Publication type:

Article

Selective interactions at pre-replication complexes categorize baseline and dormant origins.

Published in:

Nature Communications, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41467-025-59509-4

By:

Thakur, Bhushan L.;
Redon, Christophe E.;
Fu, Haiqing;
Sebastian, Robin;
Kusi, Nana A.;
Zhuang, Sophie Z.;
Pongor, Lorinc S.;
Bohr, Vilhelm A.;
Aladjem, Mirit I.

Publication type:

Article

The effect of mitoxantrone as an anticancer drug on hepatocytes nuclei and chromatin: Selective release of histone proteins.

Published in:

Indian Journal of Pharmacology, 2011, v. 43, n. 2, p. 187, doi. 10.4103/0253-7613.77362

By:

Hajihassan, Zahra;
Rabbani-Chadegani, Azra

Publication type:

Article

Quantitative nuclear texture features analysis confirms WHO classification 2004 for lung carcinomas.

Published in:

Modern Pathology, 2006, v. 19, n. 3, p. 453, doi. 10.1038/modpathol.3800541

By:

Schmid, Katharina;
Angerstein, Nina;
Geleff, Silvana;
Gschwendtner, Andreas

Publication type:

Article

Neuropathology.

Published in:: Modern Pathology, 2005, v. 18, p. 291A, doi. 10.1038/sj.modpathol.3800919
Publication type:: Article

Karyometry detects subvisual differences in chromatin organization state between cribriform and flat high-grade prostatic intraepithelial neoplasia.

Published in:

Modern Pathology, 2004, v. 17, n. 8, p. 928, doi. 10.1038/modpathol.3800142

By:

Montironi, Rodolfo;
Thompson, Deborah;
Scarpelli, Marina;
Mazzucchelli, Roberta;
Peketi, Prasanthi;
Hamilton, Peter W.;
Bostwick, David G.;
Bartels, Peter H.

Publication type:

Article

Grading of Atypia in Nevi: Correlation with Melanoma Risk.

Published in:

Modern Pathology, 2003, v. 16, n. 8, p. 764, doi. 10.1097/01.MP.0000082394.91761.E5

By:

Arumi-Uria, Montserrat;
McNutt, N. Scott;
Finnerty, Bridget

Publication type:

Article

Chromatin Modulatory Proteins and Olfactory Receptor Signaling in the Refinement and Maintenance of Fruitless Expression in Olfactory Receptor Neurons.

Published in:

PLoS Biology, 2016, v. 14, n. 4, p. 1, doi. 10.1371/journal.pbio.1002443

By:

Hueston, Catherine E.;
Olsen, Douglas;
Li, Qingyun;
Okuwa, Sumie;
Peng, Bo;
Wu, Jianni;
Volkan, Pelin Cayirlioglu

Publication type:

Article

Correction: Repressive LTR Nucleosome Positioning by the BAF Complex Is Required for HIV Latency.

Published in:

2015

By:

Rafati, Haleh;
Parra, Maribel;
Hakre, Shweta;
Moshkin, Yuri;
Verdin, Eric;
Mahmoudi, Tokameh

Publication type:

Correction Notice

The Chromatin Assembly Factor 1 Promotes Rad51-Dependent Template Switches at Replication Forks by Counteracting D-Loop Disassembly by the RecQ-Type Helicase Rqh1.

Published in:

PLoS Biology, 2014, v. 12, n. 10, p. 1, doi. 10.1371/journal.pbio.1001968

By:

Pietrobon, Violena;
Fréon, Karine;
Hardy, Julien;
Costes, Audrey;
Iraqui, Ismail;
Ochsenbein, Françoise;
Lambert, Sarah A.E.

Publication type:

Article

Pre-B Cell Receptor Signaling Induces Immunoglobulin κ Locus Accessibility by Functional Redistribution of Enhancer-Mediated Chromatin Interactions.

Published in:

PLoS Biology, 2014, v. 12, n. 2, p. 1, doi. 10.1371/journal.pbio.1001791

By:

Stadhouders, Ralph;
de Bruijn, Marjolein J. W.;
Rother, Magdalena B.;
Yuvaraj, Saravanan;
de Almeida, Claudia Ribeiro;
Kolovos, Petros;
Van Zelm, Menno C.;
van Ijcken, Wilfred;
Grosveld, Frank;
Soler, Eric;
Hendriks, Rudi W.

Publication type:

Article

Conservation and Divergence of Regulatory Strategies at Hox Loci and the Origin of Tetrapod Digits.

Published in:

PLoS Biology, 2014, v. 12, n. 1, p. 1, doi. 10.1371/journal.pbio.1001773

By:

Woltering, Joost M.;
Noordermeer, Daan;
Leleu, Marion;
Duboule, Denis

Publication type:

Article

The Epigenome of Evolving Drosophila Neo-Sex Chromosomes: Dosage Compensation and Heterochromatin Formation.

Published in:

PLoS Biology, 2013, v. 11, n. 11, p. 1, doi. 10.1371/journal.pbio.1001711

By:

Zhou, Qi;
Ellison, Christopher E.;
Kaiser, Vera B.;
Alekseyenko, Artyom A.;
Gorchakov, Andrey A.;
Bachtrog, Doris

Publication type:

Article

Deacetylation Ensures Timely Regulation of Flowering.

Published in:

PLoS Biology, 2013, v. 11, n. 9, p. 1, doi. 10.1371/journal.pbio.1001646

By:

Coombs, Amy

Publication type:

Article

Bursting with Randomness: A Simple Model for Stochastic Control of Gene Expression.

Published in:

PLoS Biology, 2013, v. 11, n. 8, p. 1, doi. 10.1371/journal.pbio.1001622

By:

Robinson, Richard

Publication type:

Article

Fbw7 Repression by Hes5 Creates a Feedback Loop That Modulates Notch-Mediated Intestinal and Neural Stem Cell Fate Decisions.

Published in:

PLoS Biology, 2013, v. 11, n. 6, p. 1, doi. 10.1371/journal.pbio.1001586

By:

Sancho, Rocio;
Blake, Sophia M.;
Tendeng, Christian;
Clurman, Bruce E.;
Lewis, Julian;
Behrens, Axel

Publication type:

Article

Transgenerational Propagation and Quantitative Maintenance of Paternal Centromeres Depends on Cid/Cenp-A Presence in Drosophila Sperm

Published in:

PLoS Biology, 2012, v. 10, n. 12, p. 1, doi. 10.1371/journal.pbio.1001434

By:

Raychaudhuri, Nitika;
Dubruille, Raphaelle;
Orsi, Guillermo A.;
Bagheri, Homayoun C.;
Loppin, Benjamin;
Lehner, Christian F.

Publication type:

Article

Genome-Wide RNA Polymerase II Profiles and RNA Accumulation Reveal Kinetics of Transcription and Associated Epigenetic Changes During Diurnal Cycles

Published in:

PLoS Biology, 2012, v. 10, n. 11, p. 1, doi. 10.1371/journal.pbio.1001442

By:

Le Martelot, Gwendal;
Canella, Donatella;
Symul, Laura;
Migliavacca, Eugenia;
Gilardi, Federica;
Liechti, Robin;
Martin, Olivier;
Harshman, Keith;
Delorenzi, Mauro;
Desvergne, Béatrice;
Herr, Winship;
Deplancke, Bart;
Schibler, Ueli;
Rougemont, Jacques;
Guex, Nicolas;
Hernandez, Nouria;
Naef, Felix

Publication type:

Article

Human-Specific Histone Methylation Signatures at Transcription Start Sites in Prefrontal Neurons

Published in:

PLoS Biology, 2012, v. 10, n. 11, p. 1, doi. 10.1371/journal.pbio.1001427

By:

Shulha, Hennady P.;
Crisci, Jessica L.;
Reshetov, Denis;
Tushir, Jogender S.;
Cheung, Iris;
Bharadwaj, Rahul;
Chou, Hsin-Jung;
Houston, Isaac B.;
Peter, Cyril J.;
Mitchell, Amanda C.;
Yao, Wei-Dong;
Myers, Richard H.;
Chen, Jiang-fan;
Preuss, Todd M.;
Rogaev, Evgeny I.;
Jensen, Jeffrey D.;
Weng, Zhiping;
Akbarian, Schahram

Publication type:

Article

Natural Selection Molds Genomic Insulator Elements

Published in:

PLoS Biology, 2012, v. 10, n. 11, p. 1, doi. 10.1371/journal.pbio.1001421

By:

Robinson, Richard

Publication type:

Article

Adaptive Evolution and the Birth of CTCF Binding Sites in the Drosophila Genome

Published in:

PLoS Biology, 2012, v. 10, n. 11, p. 1, doi. 10.1371/journal.pbio.1001420

By:

Ni, Xiaochun;
Zhang, Yong E.;
Nègre, Nicolas;
Chen, Sidi;
Long, Manyuan;
White, Kevin P.

Publication type:

Article

Systematic Dissection of Roles for Chromatin Regulators in a Yeast Stress Response.

Published in:

PLoS Biology, 2012, v. 10, n. 7, p. 1, doi. 10.1371/journal.pbio.1001369

By:

Weiner, Assaf;
Chen, Hsiuyi V.;
Chih Long Liu;
Rahat, Ayelet;
Klien, Avital;
Soares, Luis;
Gudipati, Mohanram;
Pfeffner, Jenna;
Regev, Aviv;
Buratowski, Stephen;
Pleiss, Jeffrey A.;
Friedman, Nir;
Rando, Oliver J.

Publication type:

Article

Hyphal Development in Candida albicans Requires Two Temporally Linked Changes in Promoter Chromatin for Initiation and Maintenance.

Published in:

PLoS Biology, 2011, v. 9, n. 7, p. 1, doi. 10.1371/journal.pbio.1001105

By:

Yang Lu;
Chang Su;
Allen Wang;
Haoping Liu

Publication type:

Article

Premitotic Assembly of Human CENPs -T and -W Switches Centromeric Chromatin to a Mitotic State.

Published in:

PLoS Biology, 2011, v. 9, n. 6, p. 1, doi. 10.1371/journal.pbio.1001082

By:

Prendergast, Lisa;
van Vuuren, Chelly;
Kaczmarczyk, Agnieszka;
Doering, Volker;
Hellwig, Daniela;
Quinn, Nadine;
Hoischen, Christian;
Diekmann, Stephan;
Sullivan, Kevin F.

Publication type:

Article

Evidence of Activity-Specific, Radial Organization of Mitotic Chromosomes in Drosophila.

Published in:

PLoS Biology, 2011, v. 9, n. 1, p. 1, doi. 10.1371/journal.pbio.1000574

By:

Strukov, Yuri G.;
Sural, Tûba H.;
Kuroda, Mitzi I.;
Sedat, John W.

Publication type:

Article

Co-Evolution of Transcriptional Silencing Proteins and the DNA Elements Specifying Their Assembly.

Published in:

PLoS Biology, 2010, v. 8, n. 11, p. 1, doi. 10.1371/journal.pbio.1000550

By:

Zill, Oliver A.;
Scannell, Devin;
Teytelman, Leonid;
Rine, Jasper

Publication type:

Article

The Role of Nucleosome Positioning in the Evolution of Gene Regulation.

Published in:

PLoS Biology, 2010, v. 8, n. 7, p. 1, doi. 10.1371/journal.pbio.1000414

By:

Tsankov, Alexander M.;
Thompson, Dawn Anne;
Socha, Amanda;
Regev, Aviv;
Rando, Oliver J.

Publication type:

Article

Roles for H2A.Z and Its Acetylation in GAL1 Transcription and Gene Induction, but Not GAL1-Transcriptional Memory.

Published in:

PLoS Biology, 2010, v. 8, n. 6, p. 1, doi. 10.1371/journal.pbio.1000401

By:

Halley, Jeffrey E.;
Kaplan, Tommy;
Wang, Alice Y.;
Kobor, Michael S.;
Rine, Jasper

Publication type:

Article

Spatial Epigenetic Control of Mono- and Bistable Gene Expression.

Published in:

PLoS Biology, 2010, v. 8, n. 3, p. 1, doi. 10.1371/journal.pbio.1000332

By:

Kelemen, János Z.;
Ratna, Prasuna;
Scherrer, Simone;
Becskei, Attila

Publication type:

Article

Global Regulator SATB1 Recruits β-Catenin and Regulates TH2 Differentiation in Wnt-Dependent Manner.

Published in:

PLoS Biology, 2010, v. 8, n. 1, p. 1, doi. 10.1371/journal.pbio.1000296

By:

Notani, Dimple;
Gottimukkala, Kamalvishnu P.;
Jayani, Ranveer S.;
Limaye, Amita S.;
Damle, Madhujit V.;
Mehta, Sameet;
Purbey, Prabhat Kumar;
Joseph, Jomon;
Galande, Sanjeev

Publication type:

Article

AGAMOUS Controls GIANT KILLER, a Multifunctional Chromatin Modifier in Reproductive Organ Patterning and Differentiation.

Published in:

PLoS Biology, 2009, v. 7, n. 11, p. 1, doi. 10.1371/journal.pbio.1000251

By:

Kian-Hong Ng;
Hao Yu;
Ito, Toshiro

Publication type:

Article

Misguided Transcriptional Elongation Causes Mixed Lineage Leukemia.

Published in:

PLoS Biology, 2009, v. 7, n. 11, p. 1, doi. 10.1371/journal.pbio.1000249

By:

Mueller, Dorothee;
García-Cuéllar, María-Paz;
Bach, Christian;
Buhl, Sebastian;
Maethner, Emanuel;
Slany, Robert K.

Publication type:

Article

Functional Anatomy of Polycomb and Trithorax Chromatin Landscapes in Drosophila Embryos.

Published in:

PLoS Biology, 2009, v. 7, n. 1, p. e1000013, doi. 10.1371/journal.pbio.1000013

By:

Leblanc, Benjamin;
Portoso, Manuela;
Jaschek, Rami;
Tolhuis, Bas;
Van Lohuizen, Maarten;
Tanay, Amos;
Cavalli, Giacomo

Publication type:

Article

Activator Control of Nucleosome Occupancy in Activation and Repression of Transcription.

Published in:

PLoS Biology, 2008, v. 6, n. 12, p. e317, doi. 10.1371/journal.pbio.0060317

By:

Bryant, Gene O.;
Prabhu, Vidya;
Floer, Monique;
Xin Wang;
Spagna, Dan;
Schreiber, David;
Ptashne, Mark

Publication type:

Article

PcG Proteins, DNA Methylation, and Gene Repression by Chromatin Looping.

Published in:

PLoS Biology, 2008, v. 6, n. 12, p. e306, doi. 10.1371/journal.pbio.0060306

By:

Tiwari, Vijay K.;
McGarvey, Kelly M.;
Licchesi, Julien D. F.;
Ohm, Joyce E.;
Herman, James G.;
Schbeler, Dirk;
Baylin, Stephen B.

Publication type:

Article

BEAF Regulates Cell-Cycle Genes through the Controlled Deposition of H3K9 Methylation Marks into Its Conserved Dual-Core Binding Sites.

Published in:

PLoS Biology, 2008, v. 6, n. 12, p. e327, doi. 10.1371/journal.pbio.0060327

By:

Emberly, Eldon;
Blattes, Roxane;
Schuettengruber, Bernd;
Hennion, Magali;
Nan Jiang;
Hart, Craig M.;
Käs, Emmanuel;
Cuvier, Olivier

Publication type:

Article

Loopy Chromatin Brings Distant DNA to Bear on Silencing Promoter Genes.

Published in:

PLoS Biology, 2008, v. 6, n. 12, p. e313, doi. 10.1371/journal.pbio.0060313

By:

Hoff, Mary

Publication type:

Article

The Nucleosome-Remodeling ATPase ISWI Is Regulated by Poly-ADP-Ribosylation.

Published in:

PLoS Biology, 2008, v. 6, n. 10, p. 2329, doi. 10.1371/journal.pbio.0060252

By:

Sala1, Anna;
La Rocca, Gaspare;
Burgio, Giosalba;
Kotova, Elena;
Di Gesù, Dario;
Collesano, Marianna;
Ingrassia, Antonia M. R.;
Tulin, Alexei V.;
Corona, Davide F. V.

Publication type:

Article

Coordinate Gene Regulation during Hematopoiesis Is Related to Genomic Organization.

Published in:

PLoS Biology, 2007, v. 5, n. 11, p. e309, doi. 10.1371/journal.pbio.0050309

By:

Kosak, Steven T.;
Scalzo, David;
Alworth, Sam V.;
Li, Fusheng;
Palmer, Stephanie;
Enver, Tariq;
Lee, James S. J.;
Groudine, Mark

Publication type:

Article

ISWI Regulates Higher-Order Chromatin Structure and Histone H1 Assembly In Vivo.

Published in:

PLoS Biology, 2007, v. 5, n. 9, p. e232, doi. 10.1371/journal.pbio.0050232

By:

Corona, Davide F. V.;
Siriaco, Giorgia;
Armstrong, Jennifer A.;
Snarskaya, Natalia;
McClymont, Stephanie A.;
Scott, Matthew P.;
Tamkun, John W.

Publication type:

Article

Tetrameric Structure of Centromeric Nucleosomes in Interphase Drosophila Cells.

Published in:

PLoS Biology, 2007, v. 5, n. 8, p. 1798, doi. 10.1371/journal.pbio.0050218

By:

Dalal, Yamini;
Wang, Hongda;
Lindsay, Stuart;
Henikoff, Steven

Publication type:

Article

H2A.Z-Mediated Localization of Genes at the Nuclear Periphery Confers Epigenetic Memory of Previous Transcriptional State.

Published in:

PLoS Biology, 2007, v. 5, n. 4, p. 0704, doi. 10.1371/journal.pbio.0050081

By:

Brickner, Donna Garvey;
Cajigas, Ivelisse;
Fondufe-Mittendorf, Yvonne;
Ahmed, Sara;
Pei-Chih Lee;
Widom, Jonathan;
Brickner, Jason H.

Publication type:

Article

Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles.

Published in:

PLoS Biology, 2007, v. 5, n. 1, p. 54, doi. 10.1371/journal.pbio.0050008

By:

Faith, Jeremiah J.;
Hayete, Boris;
Thaden, Joshua T.;
Mogno, Ilaria;
Wierzbowski, Jamey;
Cottarel, Guillaume;
Kasif, Simon;
Collins, James J.;
Gardner, Timothy S.

Publication type:

Article

Chromosomal Organization: Mingling with the Neighbors.

Published in:

PLoS Biology, 2006, v. 4, n. 5, p. e155, doi. 10.1371/journal.pbio.0040155

By:

Aten, Jacob A.;
Kanaar, Roland

Publication type:

Article

Interphase Chromosomes Mingle with Their Peers.

Published in:

PLoS Biology, 2006, v. 4, n. 5, p. e174, doi. 10.1371/journal.pbio.0040174

By:

Chanut, Françoise

Publication type:

Article

Polyglutamine Leads to Altered Chromatin Architecture and Neurodegeneration.

Published in:

PLoS Biology, 2006, v. 4, n. 3, p. 302, doi. 10.1371/journal.pbio.0040070

By:

Robinson, Richard

Publication type:

Article

Variant Histone H2A.Z Is Globally Localized to the Promoters of Inactive Yeast Genes and Regulates Nucleosome Positioning.

Published in:

PLoS Biology, 2005, v. 3, n. 12, p. e384, doi. 10.1371/journal.pbio.0030384

By:

Guillemette, Benoit;
Bataille, Alain R.;
Gevry, Nicolas;
Adam, Maryse;
Blanchette, Mathieu;
Robert, Francois;
Gaudreau, Luc

Publication type:

Article

A simplified chromatin dispersion (nuclear halo) assay for detecting DNA breakage induced by ionizing radiation and chemical agents.

Published in:

Biotechnic & Histochemistry, 2012, v. 87, n. 3, p. 208, doi. 10.3109/10520295.2011.604163

By:

Galaz-Leiva, S;
Pérez-Rodríguez, G;
Blázquez-Castro, A;
Stockert, JC

Publication type:

Article