Works matching DE "PROTEIN-protein interactions"

Results: 5000

Genomic insights about the effect of sodium-glucose cotransporter 2 inhibitors: a systematic review.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1571032

By:

Saravana Kumar, Pavitraa;
Chidambaram, Yogapriya;
Shree Devi, G.;
Venkatesan, Vettriselvi;
Sankaran, Ramesh;
Senguttuvan, Nagendra Boopathy;
Sadagopan, Thanikachalam;
Prabhakaran, Dorairaj

Publication type:

Article

c-di-GMP does not bind H-NS, nor inhibits H-NS binding DNA.

Published in:

2025

By:

Wang, Jiayu;
Wei, Hehan;
Xia, Bin

Publication type:

Letter

Crystallographic fragment screening reveals ligand hotspots in TRIM21 PRY-SPRY domain.

Published in:

Communications Chemistry, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42004-025-01574-3

By:

Kim, Yeojin;
Lučić, Aleksandar;
Lenz, Christopher;
Farges, Frederic;
Schwalm, Martin P.;
Saxena, Krishna;
Hanke, Thomas;
Marples, Peter G.;
Aschenbrenner, Jasmin C.;
Fearon, Daren;
von Delft, Frank;
Krämer, Andreas;
Knapp, Stefan

Publication type:

Article

Bioinformatics insights into transcriptomic biomarkers for atopic dermatitis.

Published in:

Journal of Research in Pharmacy, 2025, v. 29, n. 3, p. 892, doi. 10.12991/jrespharm.1693724

By:

ADIKUSUMA, Wirawan;
MUGIYANTO, Eko;
IRHAM, Lalu Muhammad;
FIRDAYANI, Firdayani;
LISTIANA, Shelvi;
IRESHA, Muthia Rahayu;
MASYITA, Ayu;
MAZAYA, Maulida;
ALFIAN, Riza

Publication type:

Article

基于网络药理学与分子对接探究黄芪调节鸡免疫功能的作用机理.

Published in:

Feed Research, 2025, v. 48, n. 8, p. 85, doi. 10.13557/j.cnki.issn1002-2813.2025.08.015

By:

杜颖;
王紫琪;
段蘅烜;
王宝相;
韦春波

Publication type:

Article

Network architecture of transcriptomic stress responses in zebrafish embryos.

Published in:

PLoS Computational Biology, 2025, v. 21, n. 6, p. 1, doi. 10.1371/journal.pcbi.1013164

By:

Beine, Kaylee;
Feugere, Lauric;
Turner, Alexander P.;
Wollenberg Valero, Katharina C.

Publication type:

Article

基于网络药理学探讨参苓白术散治疗肿瘤恶病质的作用机制.

Published in:

Journal of Pharmaceutical Practice & Service, 2025, v. 43, n. 5, p. 242, doi. 10.12206/j.issn.2097-2024.202208115

By:

柯刚;
董清科;
肖世容;
奔萬;
李荣;
汪代杰

Publication type:

Article

基于网络药理学和分子对接的骨力胶囊治疗骨关节炎作用机制研究.

Published in:

Evaluation & Analysis of Drug-Use in Hospitals of China / Zhongguo Yiyuan Yongyao Pingjia yu Fenxi, 2025, v. 25, n. 5, p. 517, doi. 10.14009/j.issn.1672-2124.2025.05.002

By:

杨思昀;
王郝嘉;
张景媛;
张繁芹;
李嘉琪;
乔川琪;
周纪颖;
柴克燕;
刘書麒;
吴嘉瑞

Publication type:

Article

AIM2-Driven Inflammation in Periodontitis: Mechanisms and Systemic Implications.

Published in:

Journal of Inflammation Research, 2025, v. 18, p. 6983, doi. 10.2147/JIR.S505907

By:

Fan, Zhen;
Chen, Rui;
Xie, Xiaomei;
Chen, Zhifeng;
Yang, Dan;
Hao, Chunbo;
Wang, Shan

Publication type:

Article

Large Yellow Croaker (Pseudosciaena crocea, Richardson) E2F4, a Cyclin-Dependent Transcription Factor, Forms a Heterodimer with DP1.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5343, doi. 10.3390/ijms26115343

By:

Cai, Xiaohui;
Chen, Honglin;
Fang, Jing;
Xu, Meijuan;
Chen, Meijuan;
Qi, Qiancheng;
Xu, Peng;
Hanington, Patrick C.;
Wu, Xinzhong

Publication type:

Article

Explainability of Protein Deep Learning Models.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5255, doi. 10.3390/ijms26115255

By:

Fazel, Zahra;
de Souza, Camila P. E.;
Golding, G. Brian;
Ilie, Lucian

Publication type:

Article

Hyaluronan: An Architect and Integrator for Cancer and Neural Diseases.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5132, doi. 10.3390/ijms26115132

By:

Hsu, Che-Yu;
Nguyen-Tran, Hieu-Huy;
Chen, Yu-An;
Lee, Kuan-Ting;
Juang, Tzong-Yuan;
Chiang, Ming-Fu;
Liu, Shin-Yi;
Chang, Nan-Shan

Publication type:

Article

The Role of Helicobacter pylori Heat Shock Proteins in Gastric Diseases' Pathogenesis.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5065, doi. 10.3390/ijms26115065

By:

Manna, Olga Maria;
Caruso Bavisotto, Celeste;
Gratie, Melania Ionelia;
Damiani, Provvidenza;
Tomasello, Giovanni;
Cappello, Francesco

Publication type:

Article

Sex alters thyroid hormone's effect on protein O-GlcNAcylation in the aged mouse heart.

Published in:

BMC Molecular & Cell Biology, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12860-025-00543-x

By:

Olson, Aaron K.;
Zhu, Wei Zhong;
Ledee, Dolena

Publication type:

Article

Extracellular vesicles in TDP-43 proteinopathies: pathogenesis and biomarker potential.

Published in:

Molecular Neurodegeneration, 2025, v. 20, n. 1, p. 1, doi. 10.1186/s13024-025-00859-4

By:

Dellar, Elizabeth R.;
Nikel, Lara;
Fowler, Stephanie;
Vahsen, Björn F.;
Dafinca, Ruxandra;
Feneberg, Emily;
Talbot, Kevin;
Turner, Martin R.;
Thompson, Alexander G.

Publication type:

Article

Proteomic alterations in the cortex and hippocampus of APP/PS1 mice: insights into potential mechanisms of Alzheimer's disease.

Published in:

Journal of Chinese Pharmaceutical Sciences, 2025, v. 34, n. 5, p. 443, doi. 10.5246/jcps.2025.05.034

By:

Hongyan Yin;
Sihan You;
Jiayi Zhang;
Luyao Sun;
Jinmeng Cao;
Xinxing Liu;
Shuang Li;
Chunyan Guo

Publication type:

Article

First Transcriptome Analysis of Hepatoblastoma in Brazil: Unraveling the Pivotal Role of Noncoding RNAs and Metabolic Pathways.

Published in:

Biochemical Genetics, 2025, v. 63, n. 3, p. 1974, doi. 10.1007/s10528-024-10764-y

By:

Aguiar, Talita Ferreira Marques;
Rivas, Maria Prates;
de Andrade Silva, Edson Mario;
Pires, Sara Ferreira;
Dangoni, Gustavo Dib;
Macedo, Taiany Curdulino;
Defelicibus, Alexandre;
Barros, Bruna Durães de Figueiredo;
Novak, Estela;
Cristofani, Lilian Maria;
Odone, Vicente;
Cypriano, Monica;
de Toledo, Silvia Regina Caminada;
da Cunha, Isabela Werneck;
da Costa, Cecilia Maria Lima;
Carraro, Dirce Maria;
Tojal, Israel;
de Oliveira Mendes, Tiago Antonio;
Krepischi, Ana Cristina Victorino

Publication type:

Article

شناسایی ژنهای هاب کلیدی مرتبط با سلولهای بنیادی سرطان سینه به منظور غلبه بر مقاومت به درمان.

Published in:

Iranian South Medical Journal, 2024, v. 27, n. 5, p. 394, doi. 10.61186/ismj.27.5.394

By:

مبینا خورشیدی;
حامد منوچهری;
مهدی عالیخانی;
مریم عزت زاده او

Publication type:

Article

Identification of Key Mitochondrial Autophagy-Related Genes in Fetal Growth Restriction.

Published in:

International Journal of Women's Health, 2025, v. 17, p. 1249, doi. 10.2147/IJWH.S510947

By:

Yao, Yanru;
Lei, Gang;
Pan, Guangxin;
Xiong, Guoping;
Shen, Jian

Publication type:

Article

Evidence from a Comprehensive Bioinformatics Analysis Point to Possible Therapeutic Targets for Vitiligo.

Published in:

Clinical, Cosmetic & Investigational Dermatology, 2025, v. 18, p. 1281, doi. 10.2147/CCID.S523231

By:

Wang, Yingwei;
Yao, Tao;
Lin, Yunlu;
Wu, Jianming

Publication type:

Article

Role of the SAF-A/HNRNPU SAP domain in X chromosome inactivation, nuclear dynamics, transcription, splicing, and cell proliferation.

Published in:

PLoS Genetics, 2025, v. 21, n. 6, p. 1, doi. 10.1371/journal.pgen.1011719

By:

Sharp, Judith A.;
Sparago, Emily;
Thomas, Rachael;
Alimenti, Kaitlyn;
Wang, Wei;
Blower, Michael D.

Publication type:

Article

Enhanced Protein Complex Detection Using Square Clustering Coefficient.

Published in:

Soft Computing - A Fusion of Foundations, Methodologies & Applications, 2025, v. 29, n. 7, p. 3627, doi. 10.1007/s00500-025-10615-x

By:

Mirzaee, Parimah;
Moghaddam Charkari, Nasrollah;
Roayaei, Mehdy

Publication type:

Article

Advances in DNA repair systems in human diseases and emerging therapeutic opportunities.

Published in:

Minerva Biotechnology & Biomolecular Research, 2025, v. 37, n. 2, p. 59, doi. 10.23736/S2724-542X.25.03280-8

By:

FAGOONEE, Sharmila;
WEISKIRCHEN, Ralf

Publication type:

Article

The MFα signal sequence in yeast-based protein secretion: challenges and innovations'.

Published in:

Applied Microbiology & Biotechnology, 2025, v. 109, n. 1, p. 1, doi. 10.1007/s00253-025-13532-z

By:

Merkaš, Magdalena;
Grujicic, Nina;
Geier, Martina;
Glieder, Anton;
Emmerstorfer-Augustin, Anita

Publication type:

Article

Searching for protein partners of short-chain 3-hydroxyacyl-CoA dehydrogenase (SCHAD) reveals keratin 8 as a novel candidate for interaction in pancreatic β-cells.

Published in:

BMC Molecular & Cell Biology, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12860-025-00544-w

By:

Velasco, Kelly;
Torsvik, Janniche;
St-Louis, Johanna L.;
Baghestani, Sarah;
Silvander, Jonas S. G.;
Kulkarni, Rohit N.;
Toivola, Diana M.;
Molven, Anders

Publication type:

Article

Mediators of the causal associations between protein ratios and ischemic stroke: a two-step Mendelian randomization study.

Published in:

Neurological Research, 2025, v. 47, n. 6, p. 504, doi. 10.1080/01616412.2025.2487867

By:

Tan, Haozhou;
Chen, Hao;
Yan, Han;
Li, Fangfang;
Yao, Yang;
Li, Ying;
Feng, Qian

Publication type:

Article

Whole exome sequencing and bioinformatics reveal PMAIP1 and PDGFRL as immune-related gene markers in follicular thyroid carcinoma.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1509245

By:

Wang, Haobo;
Shang, Fangjian;
Jiang, Xia;
Li, Zhongxin;
Li, Dongyun;
Zhou, Chuanmin;
Pang, Bo;
Kang, Longfei;
Liu, Bo;
Zhao, Zengren

Publication type:

Article

The ascent of AKAPs, from architectural elements to kinase anchors: a perspective.

Published in:

Biochemical Journal, 2025, v. 482, n. 10, p. 485, doi. 10.1042/BCJ20253085

By:

Falcone, Jerome I.;
Scott, John D.

Publication type:

Article

Sequence rules for a long SPOP-binding degron required for protein ubiquitylation.

Published in:

Biochemical Journal, 2025, v. 482, n. 10, p. 583, doi. 10.1042/BCJ20253041

By:

Makhlouf, Linda;
Mishra, Mukul;
Makhlouf, Hannah;
Manfield, Iain;
Busino, Luca;
Zeqiraj, Elton

Publication type:

Article

TRIM19 enhances the chemosensitivity of endometrial cancer by regulating the TBX2/NRF2 axis.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02717-7

By:

Ding, Ning;
Li, Yujiao;
Yu, Xiaohui

Publication type:

Article

The third intracellular loop of Drosophila Lilipod is required for protein function in vivo and can mediate protein-protein interactions in vitro.

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0325326

By:

Roy, Merin Vellooparambil;
Neal, Scott J.;
Pignoni, Francesca

Publication type:

Article

Genome-wide identification of bHLH transcription factors related to plant development and abiotic stress response in sand rice (Agriophyllum squarrosum (L.) Moq.)).

Published in:

Genetica, 2025, v. 153, n. 1, p. 1, doi. 10.1007/s10709-025-00238-3

By:

Zhang, Ruizhen;
Cui, Xiaoyun;
Li, Xiaofeng;
Zhao, Pengshan

Publication type:

Article

The Relationship between Wheat Protein Conformation and Rheological Properties.

Published in:

Journal of Chinese Institute of Food Science & Technology / Zhongguo Shipin Xuebao, 2025, v. 25, n. 4, p. 523, doi. 10.16429/j.1009-7848.2025.04.044

By:

DONG Ziyan;
FAN Zhen;
LEI Junjie;
GUO Boli;
ZHANG Bo

Publication type:

Article

Effects of Oat β-Glucan Combined with Ultrasonic Treatment on Gel Properties of Fish Myofibrillar Protein at Low-salt Concentration.

Published in:

Journal of Chinese Institute of Food Science & Technology / Zhongguo Shipin Xuebao, 2025, v. 25, n. 4, p. 53, doi. 10.16429/j.1009-7848.2025.04.006

By:

ZHAO Honglei;
HE Xueli;
XU Yongxia;
LI Xuepeng;
YI Shumin;
LI Jianrong

Publication type:

Article

Structural analysis of full-length human transmembrane protein 94 argues against its classification as a P-type Mg<sup>2+</sup> ATPase.

Published in:

Cell Discovery, 2025, v. 11, n. 1, p. 1, doi. 10.1038/s41421-025-00806-z

By:

Li, Yuqi;
Cong, Ye;
Lou, Xinyao;
Li, Weiping;
Wang, Runhao;
Gong, Mingyu;
Xiao, Jiaxian;
Qian, Dandan;
Yan, Chuangye;
Gong, Deshun

Publication type:

Article

Integrated Computational/Experimental Identification, Phosphorylation and Stapling of an Intramolecular Auto-Inhibitory Helical Segment C-Terminal to Breast Cancer Her2 Kinase Domain.

Published in:

Journal of Computational Biophysics & Chemistry, 2025, v. 24, n. 10, p. 1403, doi. 10.1142/S2737416525500292

By:

Dong, Min;
Huang, Weiwei

Publication type:

Article

Metformin as a modulator of mitochondria-mediated antiviral innate immunity: Insights from molecular docking analysis.

Published in:

Medicine Science, 2025, v. 14, n. 2, p. 472, doi. 10.5455/medscience.2025.02.039

By:

Nalkiran, Ihsan;
Nalkiran, Hatice Sevim

Publication type:

Article

The solute carrier superfamily interactome.

Published in:

Molecular Systems Biology, 2025, v. 21, n. 6, p. 632, doi. 10.1038/s44320-025-00109-1

By:

Frommelt, Fabian;
Ladurner, Rene;
Goldmann, Ulrich;
Wolf, Gernot;
Ingles-Prieto, Alvaro;
Lineiro-Retes, Eva;
Gelová, Zuzana;
Hopp, Ann-Katrin;
Christodoulaki, Eirini;
Teoh, Shao Thing;
Leippe, Philipp;
Santini, Brianda L;
Rebsamen, Manuele;
Lindinger, Sabrina;
Serrano, Iciar;
Onstein, Svenja;
Klimek, Christoph;
Barbosa, Barbara;
Pantielieieva, Anastasiia;
Dvorak, Vojtech

Publication type:

Article

Spatial proteomics in translational and clinical research.

Published in:

Molecular Systems Biology, 2025, v. 21, n. 6, p. 526, doi. 10.1038/s44320-025-00101-9

By:

Horvath, Peter;
Coscia, Fabian

Publication type:

Article

Comprehensive Analysis of the Active Components and Mechanisms of Panax notoginseng in Steroid-associated Necrosis of Femoral Head Using UHPLC-QE-MS, Network Pharmacology, and Molecular Dynamics Simulations.

Published in:

Natural Product Communications, 2025, v. 20, n. 5, p. 1, doi. 10.1177/1934578X251340455

By:

Han, Jie;
Shang, Kebin;
Peng, Qinglin;
Wu, Yu kun;
Wu, Yachao;
Nong, Bin

Publication type:

Article

Conserved domains and structural motifs that differentiate closely related Rex1 and Rex3 DEDDh exoribonucleases are required for their function in yeast.

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0321120

By:

Daniels, Peter W.;
Kelly, Sophie;
Tebbs, Iwan J.;
Mitchell, Phil

Publication type:

Article

ERCnet: Phylogenomic Prediction of Interaction Networks in the Presence of Gene Duplication Open Access.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 5, p. 1, doi. 10.1093/molbev/msaf089

By:

Forsythe, Evan S;
Gatts, Tony C;
Lane, Linnea E;
deRoux, Chris;
Berggren, Monica J;
Rehmann, Elizabeth A;
Zak, Emily N;
Bartel, Trinity;
L'Argent, Luna A;
Sloan, Daniel B

Publication type:

Article

Fluorescent reporter mouse models for genome editing: choices and challenges.

Published in:

Mammalian Genome, 2025, v. 36, n. 2, p. 372, doi. 10.1007/s00335-024-10079-8

By:

Walkey, Christopher J.

Publication type:

Article

CHCHD4 Oxidoreductase Activity: A Comprehensive Analysis of the Molecular, Functional, and Structural Properties of Its Redox-Regulated Substrates.

Published in:

Molecules, 2025, v. 30, n. 10, p. 2117, doi. 10.3390/molecules30102117

By:

Balasco, Nicole;
Modjtahedi, Nazanine;
Monti, Alessandra;
Ruvo, Menotti;
Vitagliano, Luigi;
Doti, Nunzianna

Publication type:

Article

Non-Canonical Inter-Protein Interactions of Key Proteins Belonging to Cytokinin Signaling Pathways.

Published in:

Plants (2223-7747), 2025, v. 14, n. 10, p. 1485, doi. 10.3390/plants14101485

By:

Savelieva, Ekaterina M.;
Arkhipov, Dmitry V.;
Kozinova, Anna V.;
Romanov, Georgy A.;
Lomin, Sergey N.

Publication type:

Article

Characterization, Expression Profile Analysis, and Functional Prediction of UGP Gene Family in Dendrocalamus brandisii.

Published in:

Plants (2223-7747), 2025, v. 14, n. 10, p. 1458, doi. 10.3390/plants14101458

By:

Li, He;
Wu, Chongyang;
Li, Xiangyi;
Xu, Junlei;
Cheng, Zhanchao;
Gao, Jian

Publication type:

Article

Bioinformatics-Assisted Discovery of Antioxidant Cyclic Peptides from Corn Gluten Meal.

Published in:

Foods, 2025, v. 14, n. 10, p. 1709, doi. 10.3390/foods14101709

By:

Liu, Hongcheng;
Sun, Tong;
Gao, He;
Liu, Xiaolong;
Zhang, Shanshan;
Liu, Tingting;
Wang, Dawei;
Fan, Hongxiu;
Zhang, Yanrong

Publication type:

Article

Author Correction: A unique and biocompatible corneal collagen crosslinking in vivo.

Published in:

2025

By:

Gulzar, Ayesha;
Kaleli, Humeyra N.;
Köseoğlu, Gülsüm D.;
Hasanreisoğlu, Murat;
Yıldız, Ayşe;
Şahin, Afsun;
Kizilel, Seda

Publication type:

Correction Notice

Molecular Mechanisms of Protein Aggregation in ALS-FTD: Focus on TDP-43 and Cellular Protective Responses.

Published in:

Cells (2073-4409), 2025, v. 14, n. 10, p. 680, doi. 10.3390/cells14100680

By:

Verde, Enza Maria;
Secco, Valentina;
Ghezzi, Andrea;
Mandrioli, Jessica;
Carra, Serena

Publication type:

Article

Structural and Functional Analysis of the Human IQSEC2 S1474Qfs*133 Mutation.

Published in:

Biomolecules (2218-273X), 2025, v. 15, n. 5, p. 635, doi. 10.3390/biom15050635

By:

Israel, Yonat;
Lowenkamp, Aaron;
Shokhen, Michael;
Netser, Shai;
Wagner, Shlomo;
Zarowin, Joseph;
Orth, Shaun;
Borisov, Veronika;
Lache, Orit;
Levy, Nina S.;
Levy, Andrew P.

Publication type:

Article