Works matching DE "MAMMAL genomes"

Results: 224

Using telomeric chromosomal aberrations to evaluate clastogen-induced genomic instability in mammalian cells.

Published in:

Chromosome Research, 2020, v. 28, n. 3/4, p. 259, doi. 10.1007/s10577-020-09641-2

By:

Bolzán, Alejandro D.

Publication type:

Article

DIRECTION: a machine learning framework for predicting and characterizing DNA methylation and hydroxymethylation in mammalian genomes.

Published in:

Bioinformatics, 2017, v. 33, n. 19, p. 2986, doi. 10.1093/bioinformatics/btx316

By:

Pavlovic, Milos;
Ray, Pradipta;
Pavlovic, Kristina;
Kotamarti, Aaron;
Min Chen;
Zhang, Michael Q.

Publication type:

Article

PcircRNA_finder: a software for circRNA prediction in plants.

Published in:

Bioinformatics, 2016, v. 32, n. 22, p. 3528, doi. 10.1093/bioinformatics/btw496

By:

Li Chen;
Yongyi Yu;
Xinchen Zhang;
Chen Liu;
Chuyu Ye;
Longjiang Fan

Publication type:

Article

Transcriptional outcome of telomere signalling.

Published in:

Nature Reviews Genetics, 2014, v. 15, n. 7, p. 491, doi. 10.1038/nrg3743

By:

Ye, Jing;
Renault, Valérie M.;
Jamet, Karine;
Gilson, Eric

Publication type:

Article

OPTIMIZING CUSTOM-DESIGNED PRIMERS FOR COMPLETE MITOCHONDRIAL GENOME SEQUENCING WITH ILLUMINA® NEXTERA® XT SYSTEM AND CONFIRMATORY SANGER SEQUENCING.

Published in:

Genetics & Applications, 2024, p. 47

By:

Nejira, Handžić;
Lana, Salihefendić;
Dino, Pećar;
Selma, Durgut;
Ivana, Čeko;
Naida, Mulahuseinović;
Adna, Ašić;
Rijad, Konjhodžić

Publication type:

Article

DNA polymorphisms detected in MT-ATP6 and MT-ATP8 genes in the residents of Sarajevo Canton.

Published in:

Genetics & Applications, 2024, v. 8, n. 1, p. 1, doi. 10.31383/ga.vol8iss1ga07

By:

Handžić, Nejira;
Pećar, Dino;
Durgut, Selma;
Mulahuseinović, Naida;
Čeko, Ivana;
Izmirlija, Mirza;
Ašić, Adna;
Salihefendić, Lana;
Konjhodžić, Rijad

Publication type:

Article

Maternally Inherited Diabetes Mellitus Associated with a Novel m.15897G>A Mutation in Mitochondrial tRNA<sup>Thr</sup> Gene.

Published in:

Journal of Diabetes Research, 2020, p. 1, doi. 10.1155/2020/2057187

By:

Li, Ke;
Wu, Lijun;
Liu, Jianjiang;
Lin, Wei;
Qi, Qiang;
Zhao, Tianlan

Publication type:

Article

Characterization of microRNA and gene expression in the cochlea of an echolocating bat (Rhinolophus affinis).

Published in:

Ecology & Evolution (20457758), 2022, v. 12, n. 6, p. 1, doi. 10.1002/ece3.9025

By:

Li, Qianqian;
Chen, Wenli;
Mao, Xiuguang

Publication type:

Article

Mitochondrial Genomes of Mammals from the Brazilian Cerrado and Phylogenetic Considerations for the Orders Artiodactyla, Carnivora, and Chiroptera (Chordata: Mammalia).

Published in:

Life (2075-1729), 2024, v. 14, n. 12, p. 1597, doi. 10.3390/life14121597

By:

Pimentel, Luiz Guilherme Pereira;
Soares, Rafael Augusto Silva;
de Assis, Priscila Martins;
Batista da Silva, Iuri;
Rodrigues-Oliveira, Igor Henrique;
Rocha, Renan Rodrigues;
de Miranda, Vinícius Gonçalves;
Bassam, Laiena Luz;
Kavalco, Karine Frehner;
Menegídio, Fabiano Bezerra;
Garcia, Caroline;
Pasa, Rubens

Publication type:

Article

Microbial Danger Signals Control Transcriptional Induction of Distinct MHC Class I L Lineage Genes in Atlantic Salmon.

Published in:

Frontiers in Immunology, 2019, p. 1, doi. 10.3389/fimmu.2019.02425

By:

Svenning, Steingrim;
Gondek-Wyrozemska, Agata T.;
van der Wal, Yorick Andreas;
Robertsen, Børre;
Jensen, Ingvill;
Jørgensen, Jorunn B.;
Edholm, Eva-Stina

Publication type:

Article

Retrotransposons evolution and impact on lncRNA and protein coding genes in pigs.

Published in:

Mobile DNA, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1186/s13100-019-0161-8

By:

Chen, Cai;
Wang, Wei;
Wang, Xiaoyan;
Shen, Dan;
Wang, Saisai;
Wang, Yali;
Gao, Bo;
Wimmers, Klaus;
Mao, Jiude;
Li, Kui;
Song, Chengyi

Publication type:

Article

Hagfish genome reveals parallel evolution of 7SL RNA-derived SINEs.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00210-2

By:

Kojima, Kenji K.

Publication type:

Article

Transducer Cascades for Biological Literature-Based Discovery.

Published in:

Information (2078-2489), 2022, v. 13, n. 5, p. 262, doi. 10.3390/info13050262

By:

Maurel, Denis;
Chéry, Sandy;
Bidoit, Nicole;
Chatalic, Philippe;
Filali, Aziza;
Froidevaux, Christine;
Poupon, Anne

Publication type:

Article

Effects of mitoTALENs-Directed Double-Strand Breaks on Plant Mitochondrial Genomes.

Published in:

Genes, 2021, v. 12, n. 2, p. 153, doi. 10.3390/genes12020153

By:

Arimura, Shin-ichi;
Gualberto, José M.;
Molinier, Jean

Publication type:

Article

Unraveling the Genome-Wide Impact of Recombinant Baculovirus Infection in Mammalian Cells for Gene Delivery.

Published in:

Genes, 2020, v. 11, n. 11, p. 1306, doi. 10.3390/genes11111306

By:

Shin, Ha Youn;
Choi, Hanul;
Kim, Nahyun;
Park, Nayoung;
Kim, Heesun;
Kim, Jaebum;
Kim, Young Bong

Publication type:

Article

Exploring Mammalian Genome within Phase-Separated Nuclear Bodies: Experimental Methods and Implications for Gene Expression.

Published in:

Genes, 2019, v. 10, n. 12, p. 1049, doi. 10.3390/genes10121049

By:

Lesne, Annick;
Baudement, Marie-Odile;
Rebouissou, Cosette;
Forné, Thierry

Publication type:

Article

Molecular Processes Connecting DNA Methylation Patterns with DNA Methyltransferases and Histone Modifications in Mammalian Genomes.

Published in:

Genes, 2018, v. 9, n. 11, p. 566, doi. 10.3390/genes9110566

By:

Jeltsch, Albert;
Broche, Julian;
Bashtrykov, Pavel

Publication type:

Article

Function and Therapeutic Potential of Non-Coding RNA in Ameloblastoma.

Published in:

OncoTargets & Therapy, 2024, v. 17, p. 643, doi. 10.2147/OTT.S474038

By:

Huang, Xu;
Gu, Feihan;
Zhao, Mingyu;
Huang, Wenkai;
Han, Wenjia;
Chen, Ran;
Wang, Yuanyin

Publication type:

Article

Variation among human, veterinary and environmental Mycobacterium chelonae-abscessus complex isolates observed using core genome phylogenomic analysis, targeted gene comparison, and anti-microbial susceptibility patterns.

Published in:

PLoS ONE, 2019, v. 14, n. 3, p. 1, doi. 10.1371/journal.pone.0214274

By:

Fogelson, Susan B.;
Camus, Alvin C.;
Lorenz, W. Walter;
Vasireddy, Ravikiran;
Vasireddy, Sruthi;
Smith, Terry;
Brown-Elliott, Barbara A.;
Jr.Wallace, Richard J.;
Hasan, Nabeeh A.;
Reischl, Udo;
Sanchez, Susan

Publication type:

Article

RNA sequencing from human neutrophils reveals distinct transcriptional differences associated with chronic inflammatory states.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0128-7

By:

Kaiyu Jiang;
Xiaoyun Sun;
Yanmin Chen;
Yufeng Shen;
Jarvis, James N.

Publication type:

Article

The history of Old World camelids in the light of molecular genetics.

Published in:

Tropical Animal Health & Production, 2016, v. 48, n. 5, p. 905, doi. 10.1007/s11250-016-1032-7

By:

Burger, Pamela

Publication type:

Article

The Complete Mitochondrial Genome and Expression Profile of Mitochondrial Protein-Coding Genes in the Bisexual and Parthenogenetic Haemaphysalis longicornis.

Published in:

Frontiers in Physiology, 2019, p. 1, doi. 10.3389/fphys.2019.00982

By:

Wang, Tianhong;
Zhang, Shiqi;
Pei, Tingwei;
Yu, Zhijun;
Liu, Jingze

Publication type:

Article

Retention of the Native Epigenome in Purified Mammalian Chromatin.

Published in:

PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0133246

By:

Ehrensberger, Andreas H.;
Franchini, Don-Marc;
East, Philip;
George, Roger;
Matthews, Nik;
Maslen, Sarah L.;
Svejstrup, Jesper Q.

Publication type:

Article

GREAM: A Web Server to Short-List Potentially Important Genomic Repeat Elements Based on Over-/Under-Representation in Specific Chromosomal Locations, Such as the Gene Neighborhoods, within or across 17 Mammalian Species.

Published in:

PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0133647

By:

Chandrashekar, Darshan Shimoga;
Dey, Poulami;
Acharya, Kshitish K.

Publication type:

Article

Genome-Wide Specific Selection in Three Domestic Sheep Breeds.

Published in:

PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0128688

By:

Wang, Huihua;
Zhang, Li;
Cao, Jiaxve;
Wu, Mingming;
Ma, Xiaomeng;
Liu, Zhen;
Liu, Ruizao;
Zhao, Fuping;
Wei, Caihong;
Du, Lixin

Publication type:

Article

Comparative Genome Analyses Reveal Distinct Structure in the Saltwater Crocodile MHC.

Published in:

PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0114631

By:

Jaratlerdsiri, Weerachai;
Deakin, Janine;
Godinez, Ricardo M.;
Shan, Xueyan;
Peterson, Daniel G.;
Marthey, Sylvain;
Lyons, Eric;
McCarthy, Fiona M.;
Isberg, Sally R.;
Higgins, Damien P.;
Chong, Amanda Y.;
John, John St;
Glenn, Travis C.;
Ray, David A.;
Gongora, Jaime

Publication type:

Article

Local Duplication of Gonadotropin-Releasing Hormone (GnRH) Receptor before Two Rounds of Whole Genome Duplication and Origin of the Mammalian GnRH Receptor.

Published in:

PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0087901

By:

Sefideh, Fatemeh Ameri;
Moon, Mi Jin;
Yun, Seongsik;
Hong, Sung In;
Hwang, Jong-Ik;
Seong, Jae Young

Publication type:

Article

Kinetics of DNA methylation inheritance by the Dnmt1-including complexes during the cell cycle.

Published in:

Cell Division, 2012, v. 7, n. 1, p. 1, doi. 10.1186/1747-1028-7-5

By:

Hervouet, Eric;
Nadaradjane, Arulraj;
Gueguen, Marine;
Vallette, François M.;
Cartron, Pierre-François

Publication type:

Article

Extensive C->U transition biases in the genomes of a wide range of mammalian RNA viruses; potential associations with transcriptional mutations, damage- or host-mediated editing of viral RNA.

Published in:

PLoS Pathogens, 2021, v. 17, n. 6, p. 1, doi. 10.1371/journal.ppat.1009596

By:

Simmonds, Peter;
Ansari, M. Azim

Publication type:

Article

Prioritizing sequence variants in conserved non-coding elements in the chicken genome using chCADD.

Published in:

PLoS Genetics, 2020, v. 16, n. 9, p. 1, doi. 10.1371/journal.pgen.1009027

By:

Groß, Christian;
Bortoluzzi, Chiara;
de Ridder, Dick;
Megens, Hendrik-Jan;
Groenen, Martien A. M.;
Reinders, Marcel;
Bosse, Mirte

Publication type:

Article

Double-edged sword: The evolutionary consequences of the epigenetic silencing of transposable elements.

Published in:

2020

By:

Choi, Jae Young;
Lee, Yuh Chwen G.

Publication type:

Literature Review

Population genetic models of GERP scores suggest pervasive turnover of constrained sites across mammalian evolution.

Published in:

PLoS Genetics, 2020, v. 16, n. 5, p. 1, doi. 10.1371/journal.pgen.1008827

By:

Huber, Christian D.;
Kim, Bernard Y.;
Lohmueller, Kirk E.

Publication type:

Article

Deciphering the vascular labyrinth: role of microRNAs and candidate gene SNPs in brain AVM development – literature review.

Published in:

2020

By:

Florian, Ioan Alexandru;
Timiș, Teodora Larisa;
Ungureanu, Gheorghe;
Florian, Ioan Stefan;
Bălașa, Adrian;
Berindan-neagoe, Ioana

Publication type:

Literature Review

The mammalian molybdenum enzymes of mARC.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2015, v. 20, n. 2, p. 265, doi. 10.1007/s00775-014-1216-4

By:

Ott, Gudrun;
Havemeyer, Antje;
Clement, Bernd

Publication type:

Article

Complete mitochondrial genome of Tlacuatzin canescens (Grayish Mouse Opossum).

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 2, p. 283, doi. 10.3109/19401736.2015.1118081

By:

Pang, Xin

Publication type:

Article

Complete mitochondrial genome of the far eastern Myotis, Myotis bombinus (Chiroptera, Vespertilionidae).

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 2, p. 267, doi. 10.3109/19401736.2015.1118072

By:

Kim, Yoo-Kyung;
Park, Su-Gon;
Kim, Tae-Wook;
Park, Jun-Ho;
Adhikari, Pradeep;
Kim, Garam;
Park, Seon-Mi;
Lee, Jun-Won;
Oh, Dae-Ju;
Han, Sang-Hyun;
Oh, Hong-Shik

Publication type:

Article

Complete mitochondrial genome reveals the phylogenetic relationship of sable Martes zibellina linkouensis.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 2, p. 263, doi. 10.3109/19401736.2015.1118070

By:

Hua, Yan;
Xu, Yanchun;
Zhang, Wei;
Li, Bo

Publication type:

Article

Complete mitochondrial genome of the Ussuri white-toothed shrew Crocidura lasiura (Insectivora, Soricidae).

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 2, p. 216, doi. 10.3109/19401736.2015.1115848

By:

Kim, Tae-Wook;
Kim, Yoo-Kyung;
Oh, Dae-Ju;
Park, Jun-Ho;
Kim, Dongmin;
Adhikari, Pradeep;
Kim, Garam;
Park, Seon-Mi;
Lee, Jun-Won;
Jung, Yong-Hwan;
Oh, Hong-Shik;
Han, Sang-Hyun

Publication type:

Article

Whole mitochondrial genome sequence for an osteoarthritis model of Guinea pig (Caviidae; Cavia ).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 3915, doi. 10.3109/19401736.2014.987263

By:

Cui, Xin-gang;
Liu, Cheng-yao;
Wei, Bo;
Zhao, Wen-jian;
Zhang, Wen-feng

Publication type:

Article

Complete mitochondrial genome sequence and mutations of the hepatocellular carcinoma model inbred Sprague–Dawley strain.

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 3884, doi. 10.3109/19401736.2014.987246

By:

Zhang, Sheng-Hang;
Li, Dong-Liang;
Zhang, Zhi-Qiang;
Zhang, Xia;
Cai, Li-Rong

Publication type:

Article

Complete mitochondrial genome sequence and mutations of the rhinosinusitis model inbred C57BL/6 mice strain.

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4162, doi. 10.3109/19401736.2014.1003893

By:

Qiu, Yizhou;
Jiao, Xuzhang;
Li, Xiulian;
Yuan, Tiejun

Publication type:

Article

Whole mitochondrial genome sequence for an osteoarthritis model of spontaneous mice DBA/1 strain.

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4142, doi. 10.3109/19401736.2014.1003882

By:

Cui, Xin-Gang;
Wang, Fu;
Sun, Jian-Min;
Jiang, Zhen-Song;
Wang, Yan;
Yang, Xiao-Xia

Publication type:

Article

Mitochondrial genome of the Luchuan pig ( Sus scrofa ).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4139, doi. 10.3109/19401736.2014.1003881

By:

Zhang, Yanfang;
Xie, Zhixun;
Deng, Xianwen;
Xie, Zhiqin;
Liu, Jiabo;
Xie, Liji;
Luo, Sisi;
Huang, Li;
Huang, Jiaoling;
Zeng, Tingting;
Wang, Sheng

Publication type:

Article

Complete mitochondrial genome sequence and mutations of the myocardial ischemia model inbred Sprague–Dawley strain.

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4114, doi. 10.3109/19401736.2014.1003869

By:

Meng, Xing;
Pei, Hui;
Lan, Chao

Publication type:

Article

The complete sequence of the mitochondrial genome of Arctic fox ( Alopex lagopus ).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4095, doi. 10.3109/19401736.2014.1003860

By:

Yan, Shou-Qing;
Guo, Peng-Cheng;
Yue, Yuan;
Li, Wan-Hong;
Bai, Chun-Yan;
Li, Yu-Mei;
Sun, Jin-Hai;
Zhao, Zhi-Hui

Publication type:

Article

The complete mitochondrial genome of Shaannan White goat ( Capra hircus ).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4086, doi. 10.3109/19401736.2014.1003856

By:

Jia, Cunling;
Wei, Zehui

Publication type:

Article

Complete mitochondrial genome of the big-eared horseshoe bat Rhinolophus macrotis (Chiroptera, Rhinolophidae).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4078, doi. 10.3109/19401736.2014.1003852

By:

Zhang, Lin;
Sun, Keping;
Feng, Jiang

Publication type:

Article

Complete mitochondrial genome of a Wild Amur Moose ( Alces alces cameloides).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4061, doi. 10.3109/19401736.2014.1003843

By:

Yu, Yanze;
Feng, Yuan;
Wang, Hongcheng;
Yang, Yong;
Duan, Yubao;
Zhou, Zhengyan;
Zhang, Minghai

Publication type:

Article

The complete sequence of mitochondrial genome of Wuyi Black pig ( Sus Scrofa ).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 3, p. 1585, doi. 10.3109/19401736.2014.958680

By:

Xiao, Dingfu;
Hu, Xionggui;
Chen, Yuguang;
Gong, Zexiu;
Chen, Li

Publication type:

Article

Next-generation sequencing of the whole mitochondrial genome identifies novel and common variants in patients with psoriasis, type 2 diabetes mellitus and psoriasis with comorbid type 2 diabetes mellitus.

Published in:

Biomedical Reports, 2021, v. 14, n. 5, p. N.PAG, doi. 10.3892/br.2021.1417

By:

Alwehaidah, Materah Salem;
Al-Kafaji, Ghada;
Bakhiet, Moiz;
Alfadhli, Suad

Publication type:

Article