Works matching DE "SMALL nuclear RNA"

Results: 409

It takes two to tangle: Prp24 and spliceosome assembly.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 6, p. 503, doi. 10.1038/nsmb.2838

By:

Pomeranz Krummel, Daniel A;
MacMillan, Andrew M

Publication type:

Article

Aberrantly expressed snoRNA, snRNA, piRNA and tRFs in canine melanoma.

Published in:

Veterinary & Comparative Oncology, 2020, v. 18, n. 3, p. 353, doi. 10.1111/vco.12558

By:

Rahman, Md. Mahfuzur;
Lai, Yu‐Chang;
Husna, Al Asmaul;
Chen, Hui‐Wen;
Tanaka, Yuiko;
Kawaguchi, Hiroaki;
Hatai, Hitoshi;
Miyoshi, Noriaki;
Nakagawa, Takayuki;
Fukushima, Ryuji;
Miura, Naoki

Publication type:

Article

Functional insights into the role of nuclear-retained long noncoding RNAs in gene expression control in mammalian cells.

Published in:

Chromosome Research, 2013, v. 21, n. 6/7, p. 695, doi. 10.1007/s10577-013-9391-7

By:

Singh, Deepak K.;
Prasanth, Kannanganattu V.

Publication type:

Article

Molecular versatility: the many faces and functions of noncoding RNA.

Published in:

2013

By:

Chadwick, Brian P.;
Scott, Kristin C.

Publication type:

Editorial

Genomic organization and comparative chromosome mapping of the U1 snRNA gene in cichlid fish, with an emphasis in Oreochromis niloticus.

Published in:

Chromosome Research, 2012, v. 20, n. 2, p. 279, doi. 10.1007/s10577-011-9271-y

By:

Cabral-de-Mello, D.;
Valente, G.;
Nakajima, R.;
Martins, C.

Publication type:

Article

Human genes for U2 small nuclear RNA map to a major adenovirus 12 modification site on chromosome 17.

Published in:

Nature, 1985, p. 115

By:

Lindgren, Valerie;
Ares Jr, Manuel;
Weiner, Alan M.;
Francke, Uta

Publication type:

Article

Pseudouridylation-mediated gene expression modulation.

Published in:

Biochemical Journal, 2024, v. 481, n. 1, p. 1, doi. 10.1042/BCJ20230096

By:

Chen, Jonathan L.;
Leeder, W.-Matthias;
Morais, Pedro;
Hironori Adachi;
Yi-Tao Yu

Publication type:

Article

snoStrip: a snoRNA annotation pipeline.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 115, doi. 10.1093/bioinformatics/btt604

By:

Bartschat, Sebastian;
Kehr, Stephanie;
Tafer, Hakim;
Stadler, Peter F.;
Hertel, Jana

Publication type:

Article

Spliceosomal snRNAs, the Essential Players in pre‐mRNA Processing in Eukaryotic Nucleus: From Biogenesis to Functions and Spatiotemporal Characteristics.

Published in:

Advanced Biology, 2024, v. 8, n. 7, p. 1, doi. 10.1002/adbi.202400006

By:

Su, Yuan;
Wu, Jiaming;
Chen, Wei;
Shan, Junling;
Chen, Dan;
Zhu, Guangyu;
Ge, Shengchao;
Liu, Yunfeng

Publication type:

Article

Overexpression of U1 snRNA induces decrease of U1 spliceosome function associated with Alzheimer’s disease.

Published in:

Journal of Neurogenetics, 2017, v. 31, n. 4, p. 337, doi. 10.1080/01677063.2017.1395425

By:

Cheng, Zhi;
Shang, Yingchun;
Gao, Shan;
Zhang, Tao

Publication type:

Article

RNA helicase UAP56 and the E3 ubiquitin ligase COP1 coordinately regulate alternative splicing to repress photomorphogenesis in Arabidopsis.

Published in:

Plant Cell, 2022, v. 34, n. 11, p. 4191, doi. 10.1093/plcell/koac235

By:

Li, Yang;
Du, Yanxin;
Huai, Junling;
Jing, Yanjun;
Lin, Rongcheng

Publication type:

Article

Phytophthora effector PSR1 hijacks the host pre-mRNA splicing machinery to modulate small RNA biogenesis and plant immunity.

Published in:

Plant Cell, 2022, v. 34, n. 9, p. 3443, doi. 10.1093/plcell/koac176

By:

Gui, Xinmeng;
Zhang, Peng;
Wang, Dan;
Ding, Zhan;
Wu, Xian;
Shi, Jinxia;
Shen, Qian-Hua;
Xu, Yong-Zhen;
Ma, Wenbo;
Qiao, Yongli

Publication type:

Article

The Arabidopsis cyclophilin CYP18-1 facilitates PRP18 dephosphorylation and the splicing of introns retained under heat stress.

Published in:

Plant Cell, 2022, v. 34, n. 6, p. 2383, doi. 10.1093/plcell/koac084

By:

Seung Hee Jo;
Hyun Ji Park;
Areum Lee;
Haemyeong Jung;
Jeong Mee Park;
Suk-Yoon Kwon;
Hyun-Soon Kim;
Hyo-Jun Lee;
Youn-Sung Kim;
Choonkyun Jung;
Hye Sun Cho

Publication type:

Article

Granting an Extension: Phosphorylation of the Pol II CTD Regulates mRNAs Produced by Read-Through from Small Nuclear RNAs.

Published in:

Plant Cell, 2017, v. 29, n. 12, p. 2957, doi. 10.1105/tpc.17.00901

By:

Mach, Jennifer

Publication type:

Article

Salt Stress and CTD PHOSPHATASE-LIKE4 Mediate the Switch between Production of Small Nuclear RNAs and mRNAs.

Published in:

Plant Cell, 2017, v. 29, n. 12, p. 3214, doi. 10.1105/tpc.17.00331

By:

Fukudome, Akihito;
Sun, Di;
Zhang, Xiuren;
Koiwa, Hisashi

Publication type:

Article

Proliferate at Your Own Risk: Ribosomal Stress and Regeneration.

Published in:

Plant Cell, 2017, v. 29, n. 10, p. 2318, doi. 10.1105/tpc.17.00782

By:

Salomé, Patrice A.

Publication type:

Article

Unexpected Structure of Plant Promoters.

Published in:

Plant Cell, 2014, v. 26, n. 7, p. 2726, doi. 10.1105/tpc.114.129239

By:

Eckardt, Nancy A.

Publication type:

Article

Twist of Fate: RID1, a DEAH-box RNA Helicase Involved in Pre-mRNA Splicing, Is Crucial for Development.

Published in:

Plant Cell, 2013, v. 25, n. 6, p. 1912, doi. 10.1105/tpc.113.250611

By:

Lockhart, Jennifer

Publication type:

Article

LSM Proteins Provide Accurate Splicing and Decay of Selected Transcripts to Ensure Normal Arabidopsis Development.

Published in:

Plant Cell, 2012, v. 24, n. 12, p. 4930, doi. 10.1105/tpc.112.103697

By:

Perea-Resa, Carlos;
Hernández-Verdeja, Tamara;
López-Cobollo, Rosa;
Castellano, María del Mar;
Salinas, Julio

Publication type:

Article

Arabidopsis Floral Initiator SKB1 Confers High Salt Tolerance by Regulating Transcription and Pre-mRNA Splicing through Altering Histone H4R3 and Small Nuclear Ribonucleoprotein LSM4 Methylation.

Published in:

Plant Cell, 2011, v. 23, n. 1, p. 396, doi. 10.1105/tpc.110.081356

By:

Zhang, Zhaoliang;
Zhang, Shupei;
Zhang, Ya;
Wang, Xin;
Li, Dan;
Li, Qiuling;
Yue, Minghui;
Li, Qun;
Zhang, Yu-e;
Xu, Yunyuan;
Xue, Yongbiao;
Chong, Kang;
Bao, Shilai

Publication type:

Article

Genetic alterations in 47 patients with a novel myelodysplastic syndrome diagnosis at a single center.

Published in:

Oncology Letters, 2019, v. 18, n. 5, p. 5077, doi. 10.3892/ol.2019.10853

By:

Zhao, Pan;
Qin, Jiayue;
Liu, Weiyi;
Quan, Richeng;
Xiao, Haiyan;
Liu, Chi;
Li, Liu;
Lv, Yan;
Zhu, Qianze;
Wang, Hongzhi;
Guo, Xiaoqing;
Wang, Juan;
Hu, Xiaomei

Publication type:

Article

A proposed method for the relative quantification of levels of circulating microRNAs in the plasma of gastric cancer patients.

Published in:

Oncology Letters, 2017, v. 13, n. 5, p. 3109, doi. 10.3892/ol.2017.5816

By:

SUÁREZ-ARRIAGA, MAYRA-CECILIA;
TORRES, JAVIER;
CAMORLINGA-PONCE, MARGARITA;
GÓMEZ-DELGADO, ALEJANDRO;
PIÑA-SÁNCHEZ, PATRICIA;
VALDEZ-SALAZAR, HILDA-ALICIA;
RIBAS-APARICIO, ROSA-MARÍA;
FUENTES-PANANÁ, EZEQUIEL M.;
RUIZ-TACHIQUÍN, MARTHA-EUGENIA

Publication type:

Article

Small RNAs in andrology: Small messengers with large perspectives.

Published in:

Andrology, 2023, v. 11, n. 4, p. 625, doi. 10.1111/andr.13417

By:

Almstrup, Kristian

Publication type:

Article

Noncoding RNA Regulation of Hormonal and Metabolic Systems in the Fruit Fly Drosophila.

Published in:

Metabolites (2218-1989), 2023, v. 13, n. 2, p. 152, doi. 10.3390/metabo13020152

By:

Chan, Ki-Kei;
Chan, Ting-Fung;
Bendena, William;
Hui, Jerome H. L.

Publication type:

Article

Regulation of Pre-mRNA Splicing: Indispensable Role of Post-Translational Modifications of Splicing Factors.

Published in:

Life (2075-1729), 2023, v. 13, n. 3, p. 604, doi. 10.3390/life13030604

By:

Kretova, Miroslava;
Selicky, Tomas;
Cipakova, Ingrid;
Cipak, Lubos

Publication type:

Article

Modulation of Small RNA Signatures by Astrocytes on Early Neurodegeneration Stages; Implications for Biomarker Discovery.

Published in:

Life (2075-1729), 2022, v. 12, n. 11, p. 1720, doi. 10.3390/life12111720

By:

López-Cepeda, Leonardo;
Castro, Juan David;
Aristizábal-Pachón, Andrés Felipe;
González-Giraldo, Yeimy;
Pinzón, Andrés;
Puentes-Rozo, Pedro J.;
González, Janneth

Publication type:

Article

An Efficient Genetic Transformation and CRISPR/Cas9-Based Genome Editing System for Moso Bamboo (Phyllostachys edulis).

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.822022

By:

Huang, Biyun;
Zhuo, Renying;
Fan, Huijin;
Wang, Yujun;
Xu, Jing;
Jin, Kangming;
Qiao, Guirong

Publication type:

Article

Dynamics of Small Non-coding RNA Profiles and the Intestinal Microbiome of High and Low Weight Chickens.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.916280

By:

Zhou, Hao;
Yang, Lingyu;
Ding, Jinmei;
Xu, Ke;
Liu, Jiajia;
Zhu, Wenqi;
Zhu, Jianshen;
He, Chuan;
Han, Chengxiao;
Qin, Chao;
Luo, Huaixi;
Chen, Kangchun;
Zheng, Yuming;
Honaker, Christa F.;
Zhang, Yan;
Siegel, Paul B.;
Meng, He

Publication type:

Article

A ribose world: current status and future challenges of plant RNA biology.

Published in:

Journal of Experimental Botany, 2023, v. 74, n. 7, p. 2203, doi. 10.1093/jxb/erad070

By:

Marquardt, Sebastian;
Manavella, Pablo Andrés

Publication type:

Article

Cloning and Functional Verification of Endogenous U6 Promoters for the Establishment of Efficient CRISPR/Cas9-Based Genome Editing in Castor (Ricinus communis).

Published in:

Genes, 2023, v. 14, n. 7, p. 1327, doi. 10.3390/genes14071327

By:

Kanai, Masatake;
Hikino, Kazumi;
Mano, Shoji

Publication type:

Article

Characterization and Optimization of Multiomic Single-Cell Epigenomic Profiling.

Published in:

Genes, 2023, v. 14, n. 6, p. 1245, doi. 10.3390/genes14061245

By:

Sandoval, Leticia;
Mohammed Ismail, Wazim;
Mazzone, Amelia;
Dumbrava, Mihai;
Fernandez, Jenna;
Munankarmy, Amik;
Lasho, Terra;
Binder, Moritz;
Simon, Vernadette;
Kim, Kwan Hyun;
Chia, Nicholas;
Lee, Jeong-Heon;
Weroha, S. John;
Patnaik, Mrinal;
Gaspar-Maia, Alexandre

Publication type:

Article

Positive Regulation of Splicing of Cellular and Viral mRNA by Intragenic RNA Elements That Activate the Stress Kinase PKR, an Antiviral Mechanism.

Published in:

Genes, 2023, v. 14, n. 5, p. 974, doi. 10.3390/genes14050974

By:

Kaempfer, Raymond

Publication type:

Article

Nucleotide Context Can Modulate Promoter Strength in Genes Transcribed by RNA Polymerase III.

Published in:

Genes, 2023, v. 14, n. 4, p. 802, doi. 10.3390/genes14040802

By:

Stasenko, Danil V.;
Tatosyan, Karina A.;
Borodulina, Olga R.;
Kramerov, Dmitri A.

Publication type:

Article

A Comprehensive Characterization of Small RNA Profiles by Massively Parallel Sequencing in Six Forensic Body Fluids/Tissue.

Published in:

Genes, 2022, v. 13, n. 9, p. 1530, doi. 10.3390/genes13091530

By:

Liu, Zhiyong;
Wang, Qiangwei;
Wang, Nana;
Zang, Yu;
Wu, Riga;
Sun, Hongyu

Publication type:

Article

Participation of TFIIIB Subunit Brf1 in Transcription Regulation in the Human Pathogen Leishmania major.

Published in:

Genes, 2021, v. 12, n. 2, p. 280, doi. 10.3390/genes12020280

By:

Florencio-Martínez, Luis E.;
Cano-Santiago, Andrés;
Mondragón-Rosas, Fabiola;
Gómez-García, Maricarmen;
Flores-Pérez, Carlos;
Román-Carraro, Fiordaliso C.;
Barocio-Rodríguez, Luis A.;
Manning-Cela, Rebeca G.;
Nepomuceno-Mejía, Tomás;
Martínez-Calvillo, Santiago;
Göringer, H. Ulrich

Publication type:

Article

Nucleotide Modifications Decrease Innate Immune Response Induced by Synthetic Analogs of snRNAs and snoRNAs.

Published in:

Genes, 2018, v. 9, n. 11, p. 531, doi. 10.3390/genes9110531

By:

Stepanov, Grigory;
Zhuravlev, Evgenii;
Shender, Victoria;
Nushtaeva, Anna;
Balakhonova, Evgenia;
Mozhaeva, Elena;
Kasakin, Marat;
Koval, Vladimir;
Lomzov, Alexander;
Pavlyukov, Marat;
Malyants, Irina;
Zhorov, Mikhail;
Kabilova, Tatyana;
Chernolovskaya, Elena;
Govorun, Vadim;
Kuligina, Elena;
Semenov, Dmitry;
Richter, Vladimir

Publication type:

Article

Emerging insights into the function and structure of the Integrator complex.

Published in:

Transcription (2154-1264), 2021, v. 12, n. 5, p. 251, doi. 10.1080/21541264.2022.2047583

By:

Pfleiderer, Moritz M.;
Galej, Wojciech P.

Publication type:

Article

Oxidative stress induces Ser 2 dephosphorylation of the RNA polymerase II CTD and premature transcription termination.

Published in:

Transcription (2154-1264), 2021, v. 12, n. 5, p. 277, doi. 10.1080/21541264.2021.2009421

By:

Yamazaki, Takashi;
Liu, Lizhi;
Manley, James L.

Publication type:

Article

CTCF regulates NELF, DSIF and P-TEFb recruitment during transcription.

Published in:

Transcription (2154-1264), 2015, v. 6, n. 5, p. 79, doi. 10.1080/21541264.2015.1095269

By:

Laitem, Clélia;
Zaborowska, Justyna;
Tellier, Michael;
Yamaguchi, Yuki;
Cao, Qingfu;
Egloff, Sylvain;
Handa, Hiroshi;
Murphy, Shona

Publication type:

Article

Coilin and Cajal bodies.

Published in:

Nucleus (1949-1034), 2023, v. 14, n. 1, p. 1, doi. 10.1080/19491034.2023.2256036

By:

Staněk, David

Publication type:

Article

Comparison of proteomic profiles from the testicular tissue of males with impaired and normal spermatogenesis.

Published in:

Systems Biology in Reproductive Medicine, 2021, v. 67, n. 2, p. 127, doi. 10.1080/19396368.2020.1846822

By:

Liang, Jiaying;
Zheng, Yichun;
Zeng, Weihong;
Chen, Liuqing;
Yang, Shaofen;
Du, Peng;
Wang, Yujiang;
Yu, Xingsu;
Zhang, Xiqian

Publication type:

Article

Limited differential expression of miRNAs and other small RNAs in LPS-stimulated human monocytes.

Published in:

PLoS ONE, 2019, v. 14, n. 3, p. 1, doi. 10.1371/journal.pone.0214296

By:

Lu, Daniel;
Yamawaki, Tracy;
Zhou, Hong;
Chou, Wen-Yu;
Chhoa, Mark;
Lamas, Edwin;
Escobar, Sabine S.;
Arnett, Heather A.;
Ge, Huanying;
Juan, Todd;
Wang, Songli;
Li, Chi-Ming

Publication type:

Article

Whole blood human transcriptome and virome analysis of ME/CFS patients experiencing post-exertional malaise following cardiopulmonary exercise testing.

Published in:

PLoS ONE, 2019, v. 14, n. 3, p. 1, doi. 10.1371/journal.pone.0212193

By:

Bouquet, Jerome;
Li, Tony;
Gardy, Jennifer L.;
Kang, Xiaoying;
Stevens, Staci;
Stevens, Jared;
VanNess, Mark;
Snell, Christopher;
Potts, James;
Miller, Ruth R.;
Morshed, Muhammad;
McCabe, Mark;
Parker, Shoshana;
Uyaguari, Miguel;
Tang, Patrick;
Steiner, Theodore;
Chan, Wee-Shian;
De Souza, Astrid-Marie;
Mattman, Andre;
Patrick, David M.

Publication type:

Article

ATRX loss induces multiple hallmarks of the alternative lengthening of telomeres (ALT) phenotype in human glioma cell lines in a cell line-specific manner.

Published in:

PLoS ONE, 2018, v. 13, n. 9, p. 1, doi. 10.1371/journal.pone.0204159

By:

Brosnan-Cashman, Jacqueline A.;
Yuan, Ming;
Graham, Mindy K.;
Rizzo, Anthony J.;
Myers, Kaylar M.;
Davis, Christine;
Zhang, Rebecca;
Esopi, David M.;
Raabe, Eric H.;
Eberhart, Charles G.;
Heaphy, Christopher M.;
Meeker, Alan K.

Publication type:

Article

Small nucleolar RNAs as new biomarkers in chronic lymphocytic leukemia.

Published in:

BMC Medical Genomics, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1755-8794-6-27

By:

Ronchetti, Domenica;
Mosca, Laura;
Cutrona, Giovanna;
Tuana, Giacomo;
Gentile, Massimo;
Fabris, Sonia;
Agnelli, Luca;
Ciceri, Gabriella;
Matis, Serena;
Massucco, Carlotta;
Colombo, Monica;
Reverberi, Daniele;
Grazia Recchia, Anna;
Bossio, Sabrina;
Negrini, Massimo;
Tassone, Pierfrancesco;
Morabito, Fortunato;
Ferrarini, Manlio;
Neri, Antonino

Publication type:

Article

The Critical Role of RNA m<sup>6</sup>A Methylation in Gliomas: Targeting the Hallmarks of Cancer.

Published in:

Cellular & Molecular Neurobiology, 2023, v. 43, n. 5, p. 1697, doi. 10.1007/s10571-022-01283-8

By:

Xu, Zhouhan;
Jiang, Jun;
Wang, Shun

Publication type:

Article

Aggregates of Small Nuclear Ribonucleic Acids ( snRNAs) in Alzheimer's Disease.

Published in:

Brain Pathology, 2014, v. 24, n. 4, p. 344, doi. 10.1111/bpa.12133

By:

Hales, Chadwick M.;
Dammer, Eric B.;
Diner, Ian;
Yi, Hong;
Seyfried, Nicholas T.;
Gearing, Marla;
Glass, Jonathan D.;
Montine, Thomas J.;
Levey, Allan I.;
Lah, James J.

Publication type:

Article

Single-Nucleus RNA-Sequencing Profiling of Mouse Lung Reduced Dissociation Bias and Improved Rare Cell-Type Detection Compared with Single-Cell RNA Sequencing.

Published in:

American Journal of Respiratory Cell & Molecular Biology, 2020, v. 63, n. 6, p. 739, doi. 10.1165/rcmb.2020-0095MA

By:

Koenitzer, Jeffrey R.;
Haojia Wu;
Atkinson, Jeffrey J.;
Brody, Steven L.;
Humphreys, Benjamin D.

Publication type:

Article

Nuclear factor erythroid 2-related factor 2 (NRF2) is a negative regulator of tissue plasminogen activator synthesis in cultured human vascular endothelial EA.hy926 cells.

Published in:

Journal of Toxicological Sciences, 2020, v. 45, n. 4, p. 237, doi. 10.2131/jts.45.237

By:

Tsutomu Takahashi;
Tsuyoshi Nakano;
Go Katoh;
Yo Shinoda;
Chika Yamamoto;
Eiko Yoshida;
Toshiyuki Kaji;
Yasuyuki Fujiwara

Publication type:

Article

Differential Expression of Small Non-Coding RNAs in Uterine Leiomyomas.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 4, p. 1688, doi. 10.3390/ijms26041688

By:

Chuang, Tsai-Der;
Ton, Nhu;
Rysling, Shawn;
Baghdasarian, Daniel;
Khorram, Omid

Publication type:

Article