Works matching Epistasis

Results: 4208

Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity.

Published in:

BioData Mining, 2015, v. 8, p. 1, doi. 10.1186/s13040-015-0077-x

By:

De, Rishika;
Ting Hu;
Moore, Jason H.;
Gilbert-Diamond, Diane

Publication type:

Article

Functional dyadicity and heterophilicity of gene-gene interactions in statistical epistasis networks.

Published in:

BioData Mining, 2015, v. 8, p. 1, doi. 10.1186/s13040-015-0062-4

By:

Ting Hu;
Andrew, Angeline S.;
Karagas, Margaret R.;
Moore, Jason H.

Publication type:

Article

Mechanistic causes of sign epistasis and its applications.

Published in:

Frontiers in Genetics, 2024, p. 01, doi. 10.3389/fgene.2024.1366917

By:

Jinqiu Zhang;
Feiyu Chen;
Xianghua Li

Publication type:

Article

Evolutionary footprint of epistasis.

Published in:

PLoS Computational Biology, 2018, v. 14, n. 9, p. 1, doi. 10.1371/journal.pcbi.1006426

By:

Pedruzzi, Gabriele;
Barlukova, Ayuna;
Rouzine, Igor M.

Publication type:

Article

Genomic prediction with epistasis models: on the marker-coding-dependent performance of the extended GBLUP and properties of the categorical epistasis model (CE).

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-016-1439-1

By:

Martini, Johannes W. R.;
Ning Gao;
Cardoso, Diercles F.;
Wimmer, Valentin;
Erbe, Malena;
Cantet, Rodolfo J. C.;
Simianer, Henner

Publication type:

Article

Epistasis Analysis Goes Genome-Wide.

Published in:

PLoS Genetics, 2017, v. 13, n. 2, p. 1, doi. 10.1371/journal.pgen.1006558

By:

Zhang, Jianzhi

Publication type:

Article

Shared Information between Residues Is Sufficient to Detect Pairwise Epistasis in a Protein.

Published in:

2016

By:

Gupta, Aditi;
Adami, Christoph

Publication type:

Opinion

Epistasis and Entropy.

Published in:

PLoS Genetics, 2016, v. 12, n. 12, p. 1, doi. 10.1371/journal.pgen.1006322

By:

Crona, Kristina

Publication type:

Article

Survival of the Curviest: Noise-Driven Selection for Synergistic Epistasis.

Published in:

PLoS Genetics, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pgen.1006003

By:

Wilkins, Jon F.;
McHale, Peter T.;
Gervin, Joshua;
Lander, Arthur D.

Publication type:

Article

Long-Range Epistasis Mediated by Structural Change in a Model of Ligand Binding Proteins.

Published in:

PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0166739

By:

Nelson, Erik D.;
Grishin, Nick V.

Publication type:

Article

Detecting epistasis with the marginal epistasis test in genetic mapping studies of quantitative traits.

Published in:

PLoS Genetics, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pgen.1006869

By:

Crawford, Lorin;
Zeng, Ping;
Mukherjee, Sayan;
Zhou, Xiang

Publication type:

Article

PERSPECTIVE: SIGN EPISTASIS AND GENETIC CONSTRAINT ON EVOLUTIONARY TRAJECTORIES.

Published in:

Evolution, 2005, v. 59, n. 6, p. 1165, doi. 10.1554/04-272

By:

Weinreich, Daniel M.;
Watson, Richard A.;
Lin Chao;
Harrison, R.

Publication type:

Article

Epistasis in genomic and survival data of cancer patients.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pcbi.1005626

By:

Matlak, Dariusz;
Szczurek, Ewa

Publication type:

Article

High-order epistasis shapes evolutionary trajectories.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 5, p. 1, doi. 10.1371/journal.pcbi.1005541

By:

Sailer, Zachary R.;
Harms, Michael J.

Publication type:

Article

SimHOEPI: A resampling simulator for generating single nucleotide polymorphism data with a high‐order epistasis model.

Published in:

Quantitative Biology, 2024, v. 12, n. 2, p. 197, doi. 10.1002/qub2.42

By:

Li, Yahan;
Cai, Xinrui;
Shang, Junliang;
Zhang, Yuanyuan;
Liu, Jin‐Xing

Publication type:

Article

Synergistic epistasis and alternative hypotheses.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 6, p. 1400, doi. 10.1111/j.1420-9101.2004.00755.x

By:

Trouve, S.;
Ding, A.;
Goudet, J.

Publication type:

Article

Evidence for epistasis: reply to Trouveet al.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 6, p. 1402, doi. 10.1111/j.1420-9101.2004.00803.x

By:

Ebert, D.;
Salathé, P.;
Kawecki, T. J.

Publication type:

Article

Epistasis affecting litter size in mice.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 3, p. 593, doi. 10.1111/j.1420-9101.2004.00702.x

By:

Peripato, A. C.;
De Brito, R. A.;
Matioli, S. A.;
L. S. Pletscher, S. A.;
Vaughn, T. T.;
Cheveaud, J. M.

Publication type:

Article

A gene's eye view of epistasis, selection and speciation.

Published in:

Journal of Evolutionary Biology, 2002, v. 15, n. 3, p. 337, doi. 10.1046/j.1420-9101.2002.00413.x

By:

Wade, M. J

Publication type:

Article

Detection of epistasis through triple test cross (TTC) analysis in maize (Zea mays L.).

Published in:

Journal of Applied & Natural Science, 2017, v. 9, n. 4, p. 2496, doi. 10.31018/jans.v9i4.1560

By:

Pavan, R.;
Gangappa, E.;
Ramesh, S.;
Rao, A. Mohan;
Shailaja, Hittalmani

Publication type:

Article

On the relationship between epistasis and genetic variance heterogeneity.

Published in:

Journal of Experimental Botany, 2017, v. 68, n. 20, p. 5431, doi. 10.1093/jxb/erx283

By:

Forsberg, Simon K. G.;
Carlborg, Örjan

Publication type:

Article

FDHE-IW: A Fast Approach for Detecting High-Order Epistasis in Genome-Wide Case-Control Studies.

Published in:

Genes, 2018, v. 9, n. 9, p. 435, doi. 10.3390/genes9090435

By:

Tuo, Shouheng

Publication type:

Article

A robustness study of parametric and nonparametric tests in model-based multifactor dimensionality reduction for epistasis detection.

Published in:

BioData Mining, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1756-0381-6-9

By:

Mahachie John, Jestinah M.;
Van Lishout, François;
Gusareva, Elena S.;
Van Steen, Kristel

Publication type:

Article

Additive and Epistasis Effects of Quantitative Trait Loci for Plant Height and Its Components in Single Segment Substitution Lines of Rice

Published in:

Acta Agronomica Sinica / Zuowu Xuebao, 2009, v. 35, n. 1, p. 48, doi. 10.1016/S1875-2780(08)60054-1

By:

ZHAO, Fang-Ming;
ZHANG, Gui-Quan;
ZENG, Rui-Zhen;
YANG, Zeng-Lin;
ZHU, Hai-Tao;
ZHONG, Bing-Qiang;
LIN, Ying-Hua;
HE, Guang-Hua

Publication type:

Article

Mapping QTLs with digenic epistasis under multiple environments and predicting heterosis based on QTL effects.

Published in:

Theoretical & Applied Genetics, 2007, v. 115, n. 3, p. 325, doi. 10.1007/s00122-007-0564-7

By:

Yong-Ming Gao;
Jun Zhu

Publication type:

Article

Genetic basis and mapping of the resistance to Rice yellow mottle virus. III. Analysis of QTL efficiency in introgressed progenies confirmed the hypothesis of complementary epistasis between two resistance QTLs.

Published in:

Theoretical & Applied Genetics, 2001, v. 103, n. 6/7, p. 1084, doi. 10.1007/s001220100642

By:

Ahmadi, N.;
Albar, L.;
Pressoir, G.;
Pinel, A.;
Fargette, D.;
Ghesquière, A.

Publication type:

Article

Shadows of complexity: what biological networks reveal about epistasis and pleiotropy.

Published in:

2009

By:

Tyler, Anna L.;
Asselbergs, Folkert W.;
Williams, Scott M.;
Moore, Jason H.

Publication type:

Essay

Two-Stage Genome-Wide Search for Epistasis with Implementation to Recombinant Inbred Lines (RIL) Populations.

Published in:

PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0115680

By:

Goldstein, Pavel;
Korol, Abraham B.;
Reiner-Benaim, Anat

Publication type:

Article

Association Mapping for Epistasis and Environmental Interaction of Yield Traits in 323 Cotton Cultivars under 9 Different Environments.

Published in:

PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0095882

By:

Jia, Yinhua;
Sun, Xiwei;
Sun, Junling;
Pan, Zhaoe;
Wang, Xiwen;
He, Shoupu;
Xiao, Songhua;
Shi, Weijun;
Zhou, Zhongli;
Pang, Baoyin;
Wang, Liru;
Liu, Jianguang;
Ma, Jun;
Du, Xiongming;
Zhu, Jun

Publication type:

Article

wtest: an integrated R package for genetic epistasis testing.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 9, p. 1, doi. 10.1186/s12920-019-0638-9

By:

Sun, Rui;
Xia, Xiaoxuan;
Chong, Ka Chun;
Zee, Benny Chung-Ying;
Wu, William Ka Kei;
Wang, Maggie Haitian

Publication type:

Article

Clinical Implications of Digenic Inheritance and Epistasis in Primary Immunodeficiency Disorders.

Published in:

Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2017.01965

By:

Ameratunga, Rohan;
Woon, See-Tarn;
Bryant, Vanessa L.;
Steele, Richard;
Slade, Charlotte;
Leung, Euphemia Yee;
Lehnert, Klaus

Publication type:

Article

Genomic Prediction of Genotypic Effects with Epistasis and Environment Interactions for Yield-Related Traits of Rapeseed (Brassica napus L.).

Published in:

Frontiers in Genetics, 2017, v. 8, p. 1, doi. 10.3389/fgene.2017.00015

By:

Xiang Luo;
Yi Ding;
Linzhong Zhang;
Yao Yue;
Snyder, John H.;
Chaozhi Ma;
Jun Zhu

Publication type:

Article

A survey about methods dedicated to epistasis detection.

Published in:

Frontiers in Genetics, 2015, p. 1, doi. 10.3389/fgene.2015.00285

By:

Niel, Clément;
Sinoquet, Christine;
Dina, Christian;
Rocheleau, Ghislain;
Jingyi Jessica Li;
Xiaodan Fan

Publication type:

Article

Estimating directional epistasis.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00198

By:

Le Rouzic, Arnaud

Publication type:

Article

Estimating directional epistasis.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00198

By:

Le Rouzic, Arnaud

Publication type:

Article

Prediction of complex traits based on the epistasis of multiple haplotypes.

Published in:

Journal of Human Genetics, 2007, v. 52, n. 5, p. 456, doi. 10.1007/s10038-007-0140-7

By:

Kung-Hao Liang;
Ying-Jye Wu

Publication type:

Article

Reverse Pathway Genetic Approach Identifies Epistasis in Autism Spectrum Disorders.

Published in:

PLoS Genetics, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pgen.1006516

By:

Mitra, Ileena;
Lavillaureix, Alinoë;
Yeh, Erika;
Traglia, Michela;
Tsang, Kathryn;
Bearden, Carrie E.;
Rauen, Katherine A.;
Weiss, Lauren A.

Publication type:

Article

Functional Regression Models for Epistasis Analysis of Multiple Quantitative Traits.

Published in:

PLoS Genetics, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pgen.1005965

By:

Zhang, Futao;
Xie, Dan;
Liang, Meimei;
Xiong, Momiao

Publication type:

Article

Hybrid Breakdown Caused by Epistasis-Based Recessive Incompatibility in a Cross of Rice (Oryza sativa L.).

Published in:

Journal of Heredity, 2015, v. 106, n. 1, p. 113, doi. 10.1093/jhered/esu065

By:

KAZUKI MATSUBARA;
EIJI YAMAMOTO;
RITSUKO MIZOBUCHI;
JUN-ICHI YONEMARU;
TOSHIO YAMAMOTO;
HIROSHI KATO;
MASAHIRO YANO

Publication type:

Article

Mitochondrial Recombination Reveals Mito--Mito Epistasis in Yeast.

Published in:

Genetics, 2018, v. 209, n. 1, p. 307, doi. 10.1534/genetics.117.300660

By:

Wolters, John F.;
Charron, Guillaume;
Gaspary, Alec;
Landry, Christian R.;
Fiumera, Anthony C.;
Fiumera, Heather L.

Publication type:

Article

Weak Epistasis May Drive Adaptation in Recombining Bacteria.

Published in:

Genetics, 2018, v. 208, n. 3, p. 1247, doi. 10.1534/genetics.117.300662

By:

Arnold, Brian J.;
Gutmann, Michael U.;
Grad, Yonatan H.;
Sheppard, Samuel K.;
Corander, Jukka;
Lipsitch, Marc;
Hanage, William P.

Publication type:

Article

Additive Phenotypes Underlie Epistasis of Fitness Effects.

Published in:

Genetics, 2018, v. 208, n. 1, p. 339, doi. 10.1534/genetics.117.300451

By:

Sackman, Andrew M.;
Rokyta, Darin R.

Publication type:

Article

Polygenicity and Epistasis Underlie Fitness-Proximal Traits in the Caenorhabditis elegans Multiparental Experimental Evolution (CeMEE) Panel.

Published in:

Genetics, 2017, v. 207, n. 4, p. 1663, doi. 10.1534/genetics.117.300406

By:

Noble, Luke M.;
Chelo, Ivo;
Guzella, Thiago;
Afonso, Bruno;
Riccardi, David D.;
Ammerman, Patrick;
Dayarian, Adel;
Carvalho, Sara;
Crist, Anna;
Pino-Querido, Ania;
Shraiman, Boris;
Rockman, Matthew V.;
Teotónio, Henrique

Publication type:

Article

Epistasis: Searching for Interacting Genetic Variants Using Crosses.

Published in:

Genetics, 2017, v. 206, n. 2, p. 531, doi. 10.1534/genetics.117.203059

By:

Ehrenreich, Ian M.

Publication type:

Article

Detecting High-Order Epistasis in Nonlinear Genotype-Phenotype Maps.

Published in:

Genetics, 2017, v. 205, n. 3, p. 1079, doi. 10.1534/genetics.116.195214

By:

Sailer, Zachary R.;
Harms, Michael J.

Publication type:

Article

Epistasis and the Structure of Fitness Landscapes: Are Experimental Fitness Landscapes Compatible with Fisher's Geometric Model?

Published in:

Genetics, 2016, v. 203, n. 2, p. 847, doi. 10.1534/genetics.115.182691

By:

Blanquart, François;
Bataillon, Thomas

Publication type:

Article

Mitonuclear Epistasis for Development Time and Its Modification by Diet in Drosophila.

Published in:

Genetics, 2016, v. 203, n. 1, p. 463, doi. 10.1534/genetics.116.187286

By:

Mossman, Jim A.;
Biancani, Leann M.;
Chen-Tseh Zhu;
Rand, David M.

Publication type:

Article

Modeling Epistasis in Genomic Selection.

Published in:

Genetics, 2015, v. 201, n. 2, p. 759, doi. 10.1534/genetics.115.177907

By:

Yong Jiang;
Reif, Jochen C.

Publication type:

Article

High throughput analyses of epistasis for swine body dimensions and organ weights.

Published in:

Animal Genetics, 2011, v. 42, n. 1, p. 15, doi. 10.1111/j.1365-2052.2010.02082.x

By:

Wei, W. H.;
Duan, Y.;
Haley, C. S.;
Ren, J.;
de Koning, D. J.;
Huang, L. S.

Publication type:

Article

Wright was right: leveraging old data and new methods to illustrate the critical role of epistasis in genetics and evolution.

Published in:

Evolution, 2024, v. 78, n. 4, p. 624, doi. 10.1093/evolut/qpae003

By:

Burch, Jorja;
Chin, Maximos;
Fontenot, Brian E;
Mandal, Sabyasachi;
McKnight, Thomas D;
Demuth, Jeffery P;
Blackmon, Heath

Publication type:

Article