Works matching DE "CAENORHABDITIS elegans genetics"

Results: 273

Global effects of the CSR-1 RNA interference pathway on the transcriptional landscape.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 4, p. 358, doi. 10.1038/nsmb.2801

By:

Cecere, Germano;
Hoersch, Sebastian;
O'Keeffe, Sean;
Sachidanandam, Ravi;
Grishok, Alla

Publication type:

Article

LIN-28 and the poly(U) polymerase PUP-2 regulate let-7 microRNA processing in Caenorhabditis elegans.

Published in:

Nature Structural & Molecular Biology, 2009, v. 16, n. 10, p. 1016, doi. 10.1038/nsmb.1675

By:

Lehrbach, Nicolas J.;
Armisen, Javier;
Lightfoot, Helen L.;
Murfitt, Kenneth J.;
Bugaut, Anthony;
Balasubramanian, Shankar;
Miska, Eric A.

Publication type:

Article

Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification.

Published in:

Bioinformatics, 2017, v. 33, n. 10, p. 1528, doi. 10.1093/bioinformatics/btw796

By:

Xiao-Tai Huang;
Yuan Zhu;
Lai Hang Leanne Chan;
Zhongying Zhao;
Hong Yan

Publication type:

Article

Efficient Secondary Database Driven Annotation Using Model Organism Sequences.

Published in:

In Silico Biology, 2006, v. 6, n. 5, p. 363, doi. 10.3233/isb-00249

By:

Faria-Campos, Alessandra C.;
Campos, Sérgio V. A.;
Prosdocimi, Francisco;
Franco, Glaura C.;
Franco, Glória R.;
Ortega, J. Miguel

Publication type:

Article

Linking dosage compensation and X chromosome nuclear organization in C. elegans.

Published in:

Nucleus (1949-1034), 2015, v. 6, n. 4, p. 266, doi. 10.1080/19491034.2015.1059546

By:

Sharma, Rahul;
Meister, Peter

Publication type:

Article

Streptothricin acetyl transferase 2 (Sat2): A dominant selection marker for Caenorhabditis elegans genome editing.

Published in:

PLoS ONE, 2018, v. 13, n. 5, p. 1, doi. 10.1371/journal.pone.0197128

By:

Obinata, Hiroyuki;
Sugimoto, Asako;
Niwa, Shinsuke

Publication type:

Article

HMP-1/α-catenin promotes junctional mechanical integrity during morphogenesis.

Published in:

PLoS ONE, 2018, v. 13, n. 2, p. 1, doi. 10.1371/journal.pone.0193279

By:

Vuong-Brender, Thanh Thi Kim;
Boutillon, Arthur;
Rodriguez, David;
Lavilley, Vincent;
Labouesse, Michel

Publication type:

Article

Functional analysis of the C. elegans cyld-1 gene reveals extensive similarity with its human homolog.

Published in:

PLoS ONE, 2018, v. 13, n. 2, p. 1, doi. 10.1371/journal.pone.0191864

By:

Hadweh, Paul;
Chaitoglou, Iro;
Gravato-Nobre, Maria Joao;
Ligoxygakis, Petros;
Mosialos, George;
Hatzivassiliou, Eudoxia

Publication type:

Article

Mouse Grueneberg ganglion neurons share molecular and functional features with C. elegans amphid neurons.

Published in:

Frontiers in Behavioral Neuroscience, 2013, v. 7, p. 1, doi. 10.3389/fnbeh.2013.00193

By:

Brechbühl, Julien;
Moine, Fabian;
Broillet, Marie-Christine

Publication type:

Article

Think globally, act locally.

Published in:

Nature Genetics, 2007, v. 39, n. 3, p. 287, doi. 10.1038/ng0307-287

By:

Reinke, Valerie

Publication type:

Article

Functional transcriptomic analysis of the role of MAB-5/Hox in Q neuroblast migration in Caenorhabditis elegans.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-304

By:

Tamayo, Joel V.;
Gujar, Mahekta;
Macdonald, Stuart J.;
Lundquist, Erik A.

Publication type:

Article

Alterations in gene expression in Caenorhabditis elegans associated with organophosphate pesticide intoxication and recovery.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-291

By:

Lewis, John A.;
Gehman, Elizabeth A.;
Baer, Christine E.;
Jackson, David A.

Publication type:

Article

Global remodeling of nucleosome positions in C. elegans.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-284

By:

Locke, George;
Haberman, Devorah;
Johnson, Steven M.;
Morozov, Alexandre V.

Publication type:

Article

Heterologous Expression in Remodeled C. elegans: A Platform for Monoaminergic Agonist Identification and Anthelmintic Screening.

Published in:

PLoS Pathogens, 2015, v. 11, n. 4, p. 1, doi. 10.1371/journal.ppat.1004794

By:

Law, Wenjing;
Wuescher, Leah M.;
Ortega, Amanda;
Hapiak, Vera M.;
Komuniecki, Patricia R.;
Komuniecki, Richard

Publication type:

Article

A Wild C. Elegans Strain Has Enhanced Epithelial Immunity to a Natural Microsporidian Parasite.

Published in:

PLoS Pathogens, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.ppat.1004583

By:

Balla, Keir M.;
Andersen, Erik C.;
Kruglyak, Leonid;
Troemel, Emily R.

Publication type:

Article

Distinct Pathogenesis and Host Responses during Infection of C. elegans by P. aeruginosa and S. aureus.

Published in:

PLoS Pathogens, 2010, v. 6, n. 7, p. 1, doi. 10.1371/journal.ppat.1000982

By:

Irazoqui, Javier E.;
Troemel, Emily R.;
Feinbaum, Rhonda L.;
Luhachack, Lyly G.;
Cezairliyan, Brent O.;
Ausubel, Frederick M.

Publication type:

Article

Cdk1 phosphorylates SPAT-1/Bora to trigger PLK-1 activation and drive mitotic entry in C. elegans embryos.

Published in:

Journal of Cell Biology, 2015, v. 208, n. 6, p. 661, doi. 10.1083/jcb.201408064

By:

Tavernier, Nicolas;
Noatynska, Anna;
Panbianco, Costanza;
Martino, Lisa;
Van Hove, Lucie;
Schwager, Françoise;
Léger, Thibaut;
Gotta, Monica;
Pintard, Lionel

Publication type:

Article

Endomesoderm specification in Caenorhabditis elegans and other nematodes.

Published in:

BioEssays, 2006, v. 28, n. 10, p. 1010, doi. 10.1002/bies.20480

By:

Maduro, Morris F.

Publication type:

Article

Olfactory experience primes the heat shock transcription factor HSF-1 to enhance the expression of molecular chaperones in C. elegans.

Published in:

Science Signaling, 2017, v. 10, n. 501, p. 1, doi. 10.1126/scisignal.aan4893

By:

Ooi, Felicia K.;
Prahlad, Veena

Publication type:

Article

Transmissions of serotonin, dopamine, and glutamate are required for the formation of neurotoxicity from Al2O3-NPs in nematode Caenorhabditis elegans.

Published in:

Nanotoxicology, 2013, v. 7, n. 5, p. 1004, doi. 10.3109/17435390.2012.689884

By:

Li, Yinxia;
Yu, Shunhui;
Wu, Qiuli;
Tang, Meng;
Wang, Dayong

Publication type:

Article

Unusual DNA packaging characteristics in endoreduplicated Caenorhabditis elegans oocytes defined by in vivo accessibility to an endogenous nuclease activity.

Published in:

Epigenetics & Chromatin, 2013, v. 6, n. 1, p. 2, doi. 10.1186/1756-8935-6-37

By:

Gu, Sam Guoping;
Goszczynski, Barbara;
McGhee, James D.;
Fire, Andrew Z.

Publication type:

Article

Using C. elegans Forward and Reverse Genetics to Identify New Compounds with Anthelmintic Activity.

Published in:

PLoS Neglected Tropical Diseases, 2016, v. 10, n. 10, p. 1, doi. 10.1371/journal.pntd.0005058

By:

Mathew, Mark D.;
Mathew, Neal D.;
Miller, Angela;
Simpson, Mike;
Au, Vinci;
Garland, Stephanie;
Gestin, Marie;
Edgley, Mark L.;
Flibotte, Stephane;
Balgi, Aruna;
Chiang, Jennifer;
Giaever, Guri;
Dean, Pamela;
Tung, Audrey;
Roberge, Michel;
Roskelley, Calvin;
Forge, Tom;
Nislow, Corey;
Moerman, Donald

Publication type:

Article

A Conditional Knockout Toolkit for Caenorhabditis elegans Based on the Cre/loxP Recombination.

Published in:

PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0114680

By:

Kage-Nakadai, Eriko;
Imae, Rieko;
Suehiro, Yuji;
Yoshina, Sawako;
Hori, Sayaka;
Mitani, Shohei

Publication type:

Article

Exposure to Mitochondrial Genotoxins and Dopaminergic Neurodegeneration in Caenorhabditis elegans.

Published in:

PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0114459

By:

González-Hunt, Claudia P.;
Leung, Maxwell C. K.;
Bodhicharla, Rakesh K.;
McKeever, Madeline G.;
Arrant, Andrew E.;
Margillo, Kathleen M.;
Ryde, Ian T.;
Cyr, Derek D.;
Kosmaczewski, Sara G.;
Hammarlund, Marc;
Meyer, Joel N.

Publication type:

Article

Highly Polygenic Variation in Environmental Perception Determines Dauer Larvae Formation in Growing Populations of Caenorhabditis elegans.

Published in:

PLoS ONE, 2014, v. 9, n. 11, p. 1, doi. 10.1371/journal.pone.0112830

By:

Green, James W. M.;
Stastna, Jana J.;
Orbidans, Helen E.;
Harvey, Simon C.

Publication type:

Article

Functional Coupling of a Nematode Chemoreceptor to the Yeast Pheromone Response Pathway.

Published in:

PLoS ONE, 2014, v. 9, n. 11, p. 1, doi. 10.1371/journal.pone.0111429

By:

Tehseen, Muhammad;
Dumancic, Mira;
Briggs, Lyndall;
Wang, Jian;
Berna, Amalia;
Anderson, Alisha;
Trowell, Stephen

Publication type:

Article

Whole Animal Automated Platform for Drug Discovery against Multi-Drug Resistant Staphylococcus aureus.

Published in:

PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0089189

By:

Rajamuthiah, Rajmohan;
Fuchs, Beth Burgwyn;
Jayamani, Elamparithi;
Kim, Younghoon;
Larkins-Ford, Jonah;
Conery, Annie;
Ausubel, Frederick M.;
Mylonakis, Eleftherios

Publication type:

Article

RNAi Experiments in D. melanogaster: Solutions to the Overlooked Problem of Off-Targets Shared by Independent dsRNAs.

Published in:

PLoS ONE, 2010, v. 5, n. 10, p. 1, doi. 10.1371/journal.pone.0013119

By:

Seinen, Erwin;
Burgerhof, Johannes G. M.;
Jansen, Ritsert C.;
Sibon, Ody C. M.

Publication type:

Article

Caenorhabditis elegans Operons Contain a Higher Proportion of Genes with Multiple Transcripts and Use 3' Splice Sites Differentially.

Published in:

PLoS ONE, 2010, v. 5, n. 8, p. 1, doi. 10.1371/journal.pone.0012456

By:

Fei Wang;
Shi Huang;
Long Ma

Publication type:

Article

Genome-Wide Gene Expression Analysis in Response to Organophosphorus Pesticide Chlorpyrifos and Diazinon in C. elegans.

Published in:

PLoS ONE, 2010, v. 5, n. 8, p. 1, doi. 10.1371/journal.pone.0012145

By:

Viñuela, Ana;
Snoek, L. Basten;
Riksen, Joost A. G.;
Kammenga, Jan E.

Publication type:

Article

Antidepressants of the Serotonin-Antagonist Type Increase Body Fat and Decrease Lifespan of Adult Caenorhabditis elegans.

Published in:

PLoS ONE, 2008, v. 3, n. 12, p. 1, doi. 10.1371/journal.pone.0004062

By:

Zarse, Kim;
Ristow, Michael

Publication type:

Article

In C. elegans, High Levels of dsRNA Allow RNAi in the Absence of RDE-4.

Published in:

PLoS ONE, 2008, v. 3, n. 12, p. 1, doi. 10.1371/journal.pone.0004052

By:

Habig, Jeffrey W.;
Aruscavage, P. Joseph;
Bass, Brenda L.

Publication type:

Article

Comparative Developmental Expression Profiling of Two C. elegans Isolates.

Published in:

PLoS ONE, 2008, v. 3, n. 12, p. 1, doi. 10.1371/journal.pone.0004055

By:

Capra, Emily J.;
Skrovanek, Sonja M.;
Kruglyak, Leonid

Publication type:

Article

Structural Efficiency of Percolated Landscapes in Flow Networks.

Published in:

PLoS ONE, 2008, v. 3, n. 11, p. 1, doi. 10.1371/journal.pone.0003654

By:

Serrano, M. Ángeles;
de Los Rios, Paolo

Publication type:

Article

Sequence Relationships among C. elegans, D. melanogaster and Human microRNAs Highlight the Extensive Conservation of microRNAs in Biology.

Published in:

PLoS ONE, 2008, v. 3, n. 7, p. 1, doi. 10.1371/journal.pone.0002818

By:

Ibáñez-Ventoso, Carolina;
Vora, Mehul;
Driscoll, Monica

Publication type:

Article

Identification and preliminary characterization of Hc-clec-160 , a novel C-type lectin domain-containing gene of the strongylid nematode Haemonchus contortus.

Published in:

Parasites & Vectors, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13071-018-3005-3

By:

Zhang, Ling;
Mou, Lingyun;
Chen, Xueqiu;
Yang, Yi;
Hu, Min;
Li, Xiangrui;
Suo, Xun;
Zhu, Xing-Quan;
Du, Aifang

Publication type:

Article

Neuronal aging: learning from C. elegans.

Published in:

Journal of Molecular Signaling, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1750-2187-8-14

By:

Chun-Hao Chen;
Yen-Chih Chen;
Hao-Ching Jiang;
Chung-Kuan Chen;
Chun-Liang Pan

Publication type:

Article

A synergistic approach towards understanding the functional significance of dopamine receptor interactions.

Published in:

Journal of Molecular Signaling, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1750-2187-8-13

By:

Pandey, Pratima;
Mersha, Mahlet D.;
Dhillon, Harbinder S.

Publication type:

Article

Computational Analysis of Lifespan Experiment Reproducibility.

Published in:

Frontiers in Genetics, 2017, p. 1, doi. 10.3389/fgene.2017.00092

By:

Petrascheck, Michael;
Miller, Dana L.

Publication type:

Article

Paths of Heritable Mitochondrial DNA Mutation and Heteroplasmy in Reference and gas-1 Strains of Caenorhabditis elegans.

Published in:

Frontiers in Genetics, 2016, p. 1, doi. 10.3389/fgene.2016.00051

By:

Wernick, Riana I.;
Estes, Suzanne;
Howe, Dana K.;
Denver, Dee R.

Publication type:

Article

Use of Caenorhabditis elegans as a model to study Alzheimer's disease and other neurodegenerative diseases.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00279

By:

Alexander, Adanna G.;
Marfil, Vanessa;
Chris Li

Publication type:

Article

Examination of Exhaustive Cloning Attempts Reveals that C. elegans piRNAs, Transposons, and Repeat Sequences are Efficiently Cloned in Yeast, but not in Bacteria.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00275

By:

Sagy, Or;
Shamir, Ron;
Rechavi, Oded

Publication type:

Article

Heterologous expression in Caenorhabditis elegans as an alternative approach to functional studies in Schistosoma mansoni.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00120

By:

Gava, Sandra G.;
Scholte, Larissa L. S.;
Volpini, Angela;
Ol iveira, Riva de Paula;
Oliveira, Guilherme

Publication type:

Article

Lifespan extension by suppression of autophagy genes in Caenorhabditis elegans.

Published in:

Genes to Cells, 2009, v. 14, n. 6, p. 717, doi. 10.1111/j.1365-2443.2009.01306.x

By:

Hashimoto, Yasufumi;
Ookuma, Sadatsugu;
Nishida, Eisuke

Publication type:

Article

Choline transporter mutations in severe congenital myasthenic syndrome disrupt transporter localization.

Published in:

2017

By:

Haicui Wang;
Salter, Claire G.;
Refai, Osama;
Hardy, Holly;
Barwick, Katy E. S.;
Akpulat, Ugur;
Kvarnung, Malin;
Chioza, Barry A.;
Harlalka, Gaurav;
Taylan, Fulya;
Sejersen, Thomas;
Wright, Jane;
Zimmerman, Holly H.;
Karakaya, Mert;
Stüve, Burkhardt;
Weis, Joachim;
Schara, Ulrike;
Russell, Mark A.;
Abdul-Rahman, Omar A.;
Chilton, John

Publication type:

journal article

Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0709-7

By:

Benoit, Gaëtan;
Lemaitre, Claire;
Lavenier, Dominique;
Drezen, Erwan;
Dayris, Thibault;
Uricaru, Raluca;
Rizk, Guillaume

Publication type:

Article

An evidence-based approach to identify aging-related genes in Caenorhabditis elegans.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0469-4

By:

Callahan, Alison;
Cifuentes, Juan José;
Dumontier, Michel

Publication type:

Article

An evidence-based approach to identify aging-related genes in Caenorhabditis elegans.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0469-4

By:

Callahan, Alison;
Cifuentes, Juan José;
Dumontier, Michel

Publication type:

Article

Age-Dependent Neuroendocrine Signaling from Sensory Neurons Modulates the Effect of Dietary Restriction on Longevity of Caenorhabditis elegans.

Published in:

PLoS Genetics, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pgen.1006544

By:

Fletcher, Marissa;
Kim, Dennis H.

Publication type:

Article

XRN2 Autoregulation and Control of Polycistronic Gene Expresssion in Caenorhabditis elegans.

Published in:

PLoS Genetics, 2016, v. 12, n. 9, p. 1, doi. 10.1371/journal.pgen.1006313

By:

Miki, Takashi S.;
Carl, Sarah H.;
Stadler, Michael B.;
Großhans, Helge

Publication type:

Article