Works matching DE "EUROPEAN Bioinformatics Institute"

Results: 70

Italian to head bioinformatics institute.

Published in:

Nature, 1994, v. 370, n. 6484, p. 7, doi. 10.1038/370007b0

By:

Abbott, Alison

Publication type:

Article

EMBL selects Cambridge as site for new database.

Published in:

Nature, 1993, v. 362, n. 6417, p. 198, doi. 10.1038/362198c0

By:

Abbott, Alison

Publication type:

Article

An update on the Enzyme Portal: an integrative approach for exploring enzyme knowledge.

Published in:

PEDS: Protein Engineering, Design & Selection, 2017, v. 30, n. 3, p. 245, doi. 10.1093/protein/gzx008

By:

Pundir, S.;
Onwubiko, J.;
Zaru, R.;
Rosanoff, S.;
Antunes, R.;
Bingley, M.;
Watkins, X.;
O'Donovan, C.;
Martin, M. J.

Publication type:

Article

"METAGENOTE: a simplified web platform for metadata annotation of genomic samples and streamlined submission to NCBI's sequence read archive".

Published in:

BMC Bioinformatics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12859-020-03694-0

By:

Quiñones, Mariam;
Liou, David T.;
Shyu, Conrad;
Kim, Wongyu;
Vujkovic-Cvijin, Ivan;
Belkaid, Yasmine;
Hurt, Darrell E.

Publication type:

Article

Guidelines for systematic reporting of sequence alignments.

Published in:

Biology Methods & Protocols, 2020, v. 5, n. 1, p. 1, doi. 10.1093/biomethods/bpaa001

By:

Vihinen, Mauno

Publication type:

Article

microRNA–mRNA Networks Linked to Inflammation and Immune System Regulation in Inflammatory Bowel Disease.

Published in:

Biomedicines, 2024, v. 12, n. 2, p. 422, doi. 10.3390/biomedicines12020422

By:

Síbia, Carina de F. de;
Quaglio, Ana E. V.;
Oliveira, Ellen C. S. de;
Pereira, Jéssica N.;
Ariede, Jovita R.;
Lapa, Rainer M. L.;
Severino, Fábio E.;
Reis, Patricia P.;
Sassaki, Lígia Y.;
Saad-Hossne, Rogerio

Publication type:

Article

The challenges of delivering bioinformatics training in the analysis of high-throughput data.

Published in:

Briefings in Bioinformatics, 2013, v. 14, n. 5, p. 538, doi. 10.1093/bib/bbt018

By:

Carvalho, Benilton S.;
Rustici, Gabriella

Publication type:

Article

Bioinformatics training: selecting an appropriate learning content management system—an example from the European Bioinformatics Institute.

Published in:

Briefings in Bioinformatics, 2010, v. 11, n. 6, p. 552, doi. 10.1093/bib/bbq023

By:

AnnWright, Victoria;
Vaughan, Brendan W.;
Laurent, Thomas;
Lopez, Rodrigo;
Brooksbank, Cath;
Schneider, Maria Victoria

Publication type:

Article

A novel liver zonation phenotype-associated molecular classification of hepatocellular carcinoma.

Published in:

Frontiers in Immunology, 2023, v. 14, p. 1, doi. 10.3389/fimmu.2023.1140201

By:

Tao Zhang;
Jian Gu;
Xinyi Wang;
Yaoyao Lu;
Cai, Kailin;
Huili Li;
Yingli Nie;
Xiangdong Chen;
Jiliang Wang

Publication type:

Article

Causal relationship between type 1 diabetes mellitus and six high-frequency infectious diseases: A two-sample mendelian randomization study.

Published in:

Frontiers in Endocrinology, 2023, v. 14, p. 1, doi. 10.3389/fendo.2023.1135726

By:

Xiao-Hong Chen;
Hong-Qiong Liu;
Qiong Nie;
Han Wang;
Tao Xiang

Publication type:

Article

Genetic variants related to systemic lupus erythematosus revealed using bioinformatics.

Published in:

European Journal of Inflammation, 2022, v. 20, p. 1, doi. 10.1177/20587392211070407

By:

Xie Shuoshan;
Xiao Changjuan;
Zhu Honglin;
Zeng Qinghua;
Ouyang Shaxi;
Wang Qi;
Zhang Lihua

Publication type:

Article

Bioinformatics Goes to School—New Avenues for Teaching Contemporary Biology.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 6, p. 1, doi. 10.1371/journal.pcbi.1003089

By:

Wood, Louisa;
Gebhardt, Philipp

Publication type:

Article

Bioinformatics Meets User-Centred Design: A Perspective.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 7, p. 1, doi. 10.1371/journal.pcbi.1002554

By:

Pavelin, Katrina;
Cham, Jennifer A.;
de Matos, Paula;
Brooksbank, Cath;
Cameron, Graham;
Steinbeck, Christoph

Publication type:

Article

Characterization of the rumen microbiome of Indian Kankrej cattle ( Bos indicus) adapted to different forage diet.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 23, p. 9749, doi. 10.1007/s00253-014-6153-1

By:

Patel, Vilas;
Patel, Amrutlal;
Parmar, Nidhi;
Patel, Anand;
Reddy, Bhaskar;
Joshi, Chaitanya

Publication type:

Article

Biology: The big challenges of big data.

Published in:

Nature, 2013, v. 498, n. 7453, p. 255, doi. 10.1038/498255a

By:

Marx, Vivien

Publication type:

Article

Access all areas.

Published in:: 2012
Publication type:: Editorial

Causality of anti-Helicobacter pylori IgG levels on myocardial infarction and potential pathogenesis: a Mendelian randomization study.

Published in:

Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1259579

By:

Qiubo Wang;
Yingbo Liu;
Zhenxing Xu;
Zhimiao Wang;
Mei Xue;
Xinran Li;
Ye Wang

Publication type:

Article

Design and quality control of large-scale two-sample Mendelian randomization studies.

Published in:

International Journal of Epidemiology, 2023, v. 52, n. 5, p. 1498, doi. 10.1093/ije/dyad018

By:

Haycock, Philip C;
Borges, Maria Carolina;
Burrows, Kimberley;
Lemaitre, Rozenn N;
Harrison, Sean;
Burgess, Stephen;
Chang, Xuling;
Westra, Jason;
Khankari, Nikhil K;
Tsilidis, Kostas K;
Gaunt, Tom;
Hemani, Gibran;
Zheng, Jie;
Truong, Therese;
O'Mara, Tracy A;
Spurdle, Amanda B;
Law, Matthew H;
Slager, Susan L;
Birmann, Brenda M;
Hosnijeh, Fatemeh Saberi

Publication type:

Article

Signature Panel of 11 Methylated mRNAs and 3 Methylated lncRNAs for Prediction of Recurrence-Free Survival in Prostate Cancer Patients.

Published in:

Pharmacogenomics & Personalized Medicine, 2021, v. 14, p. 797, doi. 10.2147/PGPM.S312024

By:

Cai, Jiarong;
Yang, Fei;
Chen, Xuelian;
Huang, He;
Miao, Bin

Publication type:

Article

Rabbit targeted genomic sequences after heterologous hybridization using human exome.

Published in:

BMC Research Notes, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13104-022-06162-5

By:

Iannuccelli, Nathalie;
Sarry, Julien;
Billon, Yvon;
Aymard, Patrick;
Helies, Virginie;
Cabau, Cédric;
Donnadieu, Cécile;
Demars, Julie

Publication type:

Article

Genotyping data of French wild boar populations using porcine genome-wide genotyping array.

Published in:

BMC Research Notes, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13104-022-06052-w

By:

Iannuccelli, Nathalie;
Mary, Nicolas;
Bonnet, Nathalie;
Petit, Geoffrey;
Valle, Carine;
Ducos, Alain;
Riquet, Juliette

Publication type:

Article

Prognostic prediction of a 12-methylation gene-based risk score system on pancreatic adenocarcinoma.

Published in:

Oncology Letters, 2020, v. 20, n. 1, p. 85, doi. 10.3892/ol.2020.11575

By:

Dou, Daoqin;
Yang, Shaohua;
Zhang, Jiren

Publication type:

Article

Love-hate relationship between hepatitis B virus and type 2 diabetes: a Mendelian randomization study.

Published in:

Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1378311

By:

Yunfeng Yu;
Keke Tong;
Gang Hu;
Xinyu Yang;
Jingyi Wu;
Siyang Bai;
Rong Yu

Publication type:

Article

The role of smoking and alcohol in mediating the effect of gastroesophageal reflux disease on lung cancer: A Mendelian randomization study.

Published in:

Frontiers in Genetics, 2023, v. 14, p. 1, doi. 10.3389/fgene.2022.1054132

By:

Jing Yang;
Duorui Nie;
Yujing Chen;
Zixing Liu;
Mengzhao Li;
Chun Gong;
Qiong Liu

Publication type:

Article

Global map of gene expression.

Published in:: BioEssays, 2010, v. 32, n. 8, p. A3
Publication type:: Article

Application of Machine Learning Classifier to Candida auris Drug Resistance Analysis.

Published in:

Frontiers in Cellular & Infection Microbiology, 2021, v. 11, p. 1, doi. 10.3389/fcimb.2021.742062

By:

Li, Dingchen;
Wang, Yaru;
Hu, Wenjuan;
Chen, Fangyan;
Zhao, Jingya;
Chen, Xia;
Han, Li

Publication type:

Article

White blood cells and chronic rhinosinusitis: a Mendelian randomization study.

Published in:

Allergy, Asthma & Clinical Immunology, 2022, v. 18, n. 1, p. 1, doi. 10.1186/s13223-022-00739-2

By:

Pongdee, Thanai;
Bielinski, Suzette J.;
Decker, Paul A.;
Kita, Hirohito;
Larson, Nicholas B.

Publication type:

Article

The author file: Paul Bertone.

Published in:

Nature Methods, 2013, v. 10, n. 12, p. 1137, doi. 10.1038/nmeth.2747

By:

Marx, Vivien

Publication type:

Article

A home for raw proteomics data.

Published in:: Nature Methods, 2012, v. 9, n. 5, p. 419, doi. 10.1038/nmeth.2011
Publication type:: Article

InterProScan 5: genome-scale protein function classification.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1236, doi. 10.1093/bioinformatics/btu031

By:

Jones, Philip;
Binns, David;
Chang, Hsin-Yu;
Fraser, Matthew;
Li, Weizhong;
McAnulla, Craig;
McWilliam, Hamish;
Maslen, John;
Mitchell, Alex;
Nuka, Gift;
Pesseat, Sebastien;
Quinn, Antony F.;
Sangrador-Vegas, Amaia;
Scheremetjew, Maxim;
Yong, Siew-Yit;
Lopez, Rodrigo;
Hunter, Sarah

Publication type:

Article

The EBI RDF platform: linked open data for the life sciences.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1338, doi. 10.1093/bioinformatics/btt765

By:

Jupp, Simon;
Malone, James;
Bolleman, Jerven;
Brandizi, Marco;
Davies, Mark;
Garcia, Leyla;
Gaulton, Anna;
Gehant, Sebastien;
Laibe, Camille;
Redaschi, Nicole;
Wimalaratne, Sarala M.;
Martin, Maria;
Le Novère, Nicolas;
Parkinson, Helen;
Birney, Ewan;
Jenkinson, Andrew M.

Publication type:

Article

A System for Information Management in BioMedical Studies—SIMBioMS.

Published in:

Bioinformatics, 2009, v. 25, n. 20, p. 2768, doi. 10.1093/bioinformatics/btp420

By:

Krestyaninova, Maria;
Zarins, Andris;
Viksna, Juris;
Kurbatova, Natalja;
Rucevskis, Peteris;
Neogi, Sudeshna Guha;
Gostev, Mike;
Perheentupa, Teemu;
Knuuttila, Juha;
Barrett, Amy;
Lappalainen, Ilkka;
Rung, Johan;
Podnieks, Karlis;
Sarkans, Ugis;
McCarthy, Mark I.;
Brazma, Alvis

Publication type:

Article

Identification of the disease-associated genes in periodontitis using the co-expression network.

Published in:

Molecular Biology, 2016, v. 50, n. 1, p. 124, doi. 10.1134/S0026893316010192

By:

Sun, G.;
Jiang, T.;
Xie, P.;
Lan, J.

Publication type:

Article

Assessing Causality Between Second-Hand Smoking and Potentially Associated Diseases in Multiple Systems: A Two-Sample Mendelian Randomization Study.

Published in:

Nicotine & Tobacco Research, 2024, v. 26, n. 6, p. 678, doi. 10.1093/ntr/ntad193

By:

Wang, Shilin;
Yang, Peiwen;
Liu, Hao;
Wang, Zhiwen;
Hu, Poyi;
Ye, Ping;
Xia, Jiahong;
Chen, Shu

Publication type:

Article

Institutes prepare for pioneering bioinformatics work.

Published in:

Nature, 2001, v. 412, n. 6843, p. 106, doi. 10.1038/35084343

By:

Butler, Declan

Publication type:

Article

Fresh funding offers lifeline to bioinformatics centre.

Published in:

Nature, 2001, v. 411, n. 6835, p. 229, doi. 10.1038/35077290

By:

Butler, Declan;
Abbott, Alison

Publication type:

Article

Biology moves into the silicon stage.

Published in:

Nature, 2001, v. 409, n. 6822, p. 964

By:

H.G.

Publication type:

Article

European centres rebuffed in infrastructure funding bid.

Published in:

Nature, 2000, v. 405, n. 6788, p. 723, doi. 10.1038/35015755

By:

Schiermeier, Quirin

Publication type:

Article

Europe seeks solution to bioinformatics shortfall.

Published in:

Nature, 2000, v. 404, n. 6778, p. 687, doi. 10.1038/35007279

By:

Gavaghan, Helen

Publication type:

Article

EMBL rescue package keeps bioinformatics centre running.

Published in:

Nature, 1999, v. 402, n. 6761, p. 450, doi. 10.1038/44907

By:

Abbott, Allison

Publication type:

Article

Life science facilities in crisis as Brussels switches off funding.

Published in:

Nature, 1999, v. 402, n. 6757, p. 3, doi. 10.1038/46851

By:

Butler, Declan

Publication type:

Article

Vacuum at the heart of Europe.

Published in:: Nature, 1999, v. 402, n. 6757, p. 1, doi. 10.1038/46847
Publication type:: Article

Biomartr: genomic data retrieval with R.

Published in:

Bioinformatics, 2017, v. 33, n. 8, p. 1216, doi. 10.1093/bioinformatics/btw821

By:

Drost, Hajk-Georg;
Paszkowski, Jerzy

Publication type:

Article

Application of beta and gamma carbonic anhydrase sequences as tools for identification of bacterial contamination in the whole genome sequence of inbred Wuzhishan minipig (Sus scrofa) annotated in databases.

Published in:

Database: The Journal of Biological Databases & Curation, 2021, v. 2021, p. 1, doi. 10.1093/database/baab029

By:

Emameh, Reza Zolfaghari;
Hosseini, Seyed Nezamedin;
Parkkila, Seppo

Publication type:

Article

Using association rule mining and ontologies to generate metadata recommendations from multiple biomedical databases.

Published in:

Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/baz059

By:

Martínez-Romero, Marcos;
O'Connor, Martin J;
Egyedi, Attila L;
Willrett, Debra;
Hardi, Josef;
Graybeal, John;
Musen, Mark A

Publication type:

Article

The InterPro BioMart: federated query and web service access to the InterPro Resource.

Published in:

Database: The Journal of Biological Databases & Curation, 2011, v. 2011, p. 1, doi. 10.1093/database/bar033

By:

Jones, Philip;
Binns, David;
McMenamin, Conor;
McAnulla, Craig;
Hunter, Sarah

Publication type:

Article

Ensembl BioMarts: a hub for data retrieval across taxonomic space.

Published in:

Database: The Journal of Biological Databases & Curation, 2011, v. 2011, p. 1, doi. 10.1093/database/bar030

By:

Kinsella, Rhoda J.;
Kähäri, Andreas;
Haider, Syed;
Zamora, Jorge;
Proctor, Glenn;
Spudich, Giulietta;
Almeida-King, Jeff;
Staines, Daniel;
Derwent, Paul;
Kerhornou, Arnaud;
Kersey, Paul;
Flicek, Paul

Publication type:

Article

Using computational predictions to improve literature-based Gene Ontology annotations: a feasibility study.

Published in:

Database: The Journal of Biological Databases & Curation, 2011, v. 2011, p. 1, doi. 10.1093/database/bar004

By:

Costanzo, Maria C.;
Park, Julie;
Balakrishnan, Rama;
Cherry, J. Michael;
Hong, Eurie L.

Publication type:

Article

A novel HIF1α-STIL-FOXM1 axis regulates tumor metastasis.

Published in:

Journal of Biomedical Science, 2022, v. 29, n. 1, p. 1, doi. 10.1186/s12929-022-00807-0

By:

Wang, Yi-Wei;
Chen, Shu-Chuan;
Gu, De-Leung;
Yeh, Yi-Chen;
Tsai, Jhih-Jie;
Yang, Kuo-Tai;
Jou, Yuh-Shan;
Chou, Teh-Ying;
Tang, Tang K.

Publication type:

Article

Associations between immune cell phenotypes and lung cancer subtypes: insights from mendelian randomization analysis.

Published in:

BMC Pulmonary Medicine, 2024, v. 24, p. 1, doi. 10.1186/s12890-024-03059-w

By:

Zheng, Jin-Min;
Lou, Chen-Xi;
Huang, Yu-Liang;
Song, Wen-Tao;
Luo, Yi-Chen;
Mo, Guan-Yong;
Tan, Lin-Yuan;
Chen, Shang-Wei;
Li, Bai-Jun

Publication type:

Article