Works matching DE "PROTEIN genetics"

Results: 1266

An asymmetric PAN3 dimer recruits a single PAN2 exonuclease to mediate mRNA deadenylation and decay.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 599, doi. 10.1038/nsmb.2837

By:

Jonas, Stefanie;
Christie, Mary;
Peter, Daniel;
Bhandari, Dipankar;
Loh, Belinda;
Huntzinger, Eric;
Weichenrieder, Oliver;
Izaurralde, Elisa

Publication type:

Article

PAN-orama: three convergent views of a eukaryotic deadenylase.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 577, doi. 10.1038/nsmb.2850

By:

Martin, Sophie;
Coller, Jeff

Publication type:

Article

The structure of the Pan2-Pan3 core complex reveals cross-talk between deadenylase and pseudokinase.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 591, doi. 10.1038/nsmb.2834

By:

Schäfer, Ingmar B;
Rode, Michaela;
Bonneau, Fabien;
Schüssler, Steffen;
Conti, Elena

Publication type:

Article

Structural basis for regulation of Arp2/3 complex by GMF.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 9, p. 1062, doi. 10.1038/nsmb.2628

By:

Luan, Qing;
Nolen, Brad J

Publication type:

Article

Phospholipid-dependent regulation of the motor activity of myosin X.

Published in:

Nature Structural & Molecular Biology, 2011, v. 18, n. 7, p. 783, doi. 10.1038/nsmb.2065

By:

Umeki, Nobuhisa;
Jung, Hyun Suk;
Sakai, Tsuyoshi;
Sato, Osamu;
Ikebe, Reiko;
Ikebe, Mitsuo

Publication type:

Article

Archaea: Archaea shape up.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 5, p. 312, doi. 10.1038/nrmicro2568

By:

van Ooij, Christiaan

Publication type:

Article

The ParMRC system: molecular mechanisms of plasmid segregation by actin-like filaments.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 10, p. 683, doi. 10.1038/nrmicro2425

By:

Salje, Jeanne;
Gayathri, Pananghat;
Löwe, Jan

Publication type:

Article

Characterization of Phaeoacremonium isolates associated with Petri disease of table grape in Northeastern Brazil, with description of Phaeoacremonium nordesticola sp. nov.

Published in:

European Journal of Plant Pathology, 2017, v. 149, n. 3, p. 695, doi. 10.1007/s10658-017-1219-4

By:

Silva, Marcondes;
Correia, Kamila;
Barbosa, Maria;
Câmara, Marcos;
Gramaje, David;
Michereff, Sami

Publication type:

Article

Genomic sequencing globally identifies functional genes and potential virulence-related effectors of Xanthomonas axonopodis pv. malvacearum.

Published in:

European Journal of Plant Pathology, 2013, v. 136, n. 4, p. 657, doi. 10.1007/s10658-013-0213-8

By:

Zhai, Jinling;
Xia, Zhihui;
Liu, Wei;
Jiang, Xingyu;
Huang, Xi

Publication type:

Article

Use of the Aspergillus oryzae actin gene promoter in a novel reporter system for exploring antifungal compounds and their target genes.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 87, n. 5, p. 1829, doi. 10.1007/s00253-010-2627-y

By:

Marui, Junichiro;
Yoshimi, Akira;
Hagiwara, Daisuke;
Fujii-Watanabe, Yoshimi;
Oda, Ken;
Koike, Hideaki;
Tamano, Koichi;
Ishii, Tomoko;
Sano, Motoaki;
Machida, Masayuki;
Abe, Keietsu

Publication type:

Article

The Pseudozyma flocculosa actin promoter allows the strong expression of a recombinant protein in the Pseudozyma species.

Published in:

Applied Microbiology & Biotechnology, 2007, v. 74, n. 6, p. 1300, doi. 10.1007/s00253-006-0786-7

By:

Neveu, Bertrand;
Michaud, Mélanie;
Belzile, François;
Bélanger, Richard R.

Publication type:

Article

Expression of bacterial hemoglobin genes to improve astaxanthin production in a methanotrophic bacterium Methylomonas sp.

Published in:

Applied Microbiology & Biotechnology, 2007, v. 74, n. 3, p. 625, doi. 10.1007/s00253-006-0708-8

By:

Luan Tao;
Sedkova, Natalia;
Yao, Henry;
Ye, Rick W.;
Sharpe, Pamela L.;
Qiong Cheng

Publication type:

Article

Molecular characterization of the actin-encoding gene and the use of its promoter for a dominant selection system in the methylotrophic yeast Hansenula polymorpha.

Published in:

Applied Microbiology & Biotechnology, 2001, v. 55, n. 6, p. 734, doi. 10.1007/s002530100605

By:

Kang, H. A.;
Hong, W.-K.;
Sohn, J.-H.;
Choi, E.-S.;
Rhee, S. K.

Publication type:

Article

Intercellular protein expression variability as a feature of stem cell pluripotency.

Published in:

Amino Acids, 2013, v. 45, n. 6, p. 1315, doi. 10.1007/s00726-013-1599-5

By:

Rosner, Margit;
Hengstschläger, Markus

Publication type:

Article

Multilocus Sequence Types of Invasive and Colonizing Neonatal Group B Streptococci in Poland.

Published in:

Medical Principles & Practice, 2014, v. 23, n. 4, p. 323, doi. 10.1159/000362368

By:

Brzychczy-Wloch, Monika;
Gosiewski, Tomasz;
Bulanda, Malgorzata

Publication type:

Article

MemBrain-contact 2.0: a new two-stage machine learning model for the prediction enhancement of transmembrane protein residue contacts in the full chain.

Published in:

Bioinformatics, 2018, v. 34, n. 2, p. 230, doi. 10.1093/bioinformatics/btx593

By:

Yang, Jing;
Shen, Hong-Bin

Publication type:

Article

IntPred: a structure-based predictor of protein–protein interaction sites.

Published in:

Bioinformatics, 2018, v. 34, n. 2, p. 223, doi. 10.1093/bioinformatics/btx585

By:

Northey, Thomas C;
Barešić, Anja;
Martin, Andrew C R

Publication type:

Article

Meta-server for automatic analysis, scoring and ranking of docking models.

Published in:

Bioinformatics, 2018, v. 34, n. 2, p. 297, doi. 10.1093/bioinformatics/btx591

By:

Anashkina, Anastasia A;
Kravatsky, Yuri;
Kuznetsov, Eugene;
Makarov, Alexander A;
Adzhubei, Alexei A

Publication type:

Article

RINspector: a Cytoscape app for centrality analyses and DynaMine flexibility prediction.

Published in:

Bioinformatics, 2018, v. 34, n. 2, p. 294, doi. 10.1093/bioinformatics/btx586

By:

Brysbaert, Guillaume;
Lorgouilloux, Kevin;
Vranken, Wim F;
Lensink, Marc F

Publication type:

Article

Epigenomic annotation-based interpretation of genomic data: from enrichment analysis to machine learning.

Published in:

Bioinformatics, 2017, v. 33, n. 20, p. 3323, doi. 10.1093/bioinformatics/btx414

By:

Dozmorov, Mikhail G.

Publication type:

Article

CircPro: an integrated tool for the identification of circRNAs with protein-coding potential.

Published in:

Bioinformatics, 2017, v. 33, n. 20, p. 3314, doi. 10.1093/bioinformatics/btx446

By:

Xianwen Meng;
Qi Chen;
Peijing Zhang;
Ming Chen

Publication type:

Article

EigenTHREADER: analogous protein fold recognition by efficient contact map threading.

Published in:

Bioinformatics, 2017, v. 33, n. 17, p. 2684, doi. 10.1093/bioinformatics/btx217

By:

Buchan, Daniel W. A.;
Jones, David T.

Publication type:

Article

Annotating function to differentially expressed LincRNAs in myelodysplastic syndrome using a network-based method.

Published in:

Bioinformatics, 2017, v. 33, n. 17, p. 2622, doi. 10.1093/bioinformatics/btx280

By:

Keqin Liu;
Liang Liu;
Weiling Zhao;
Xiaobo Zhou;
Thoms, Julie A. I.;
Beck, Dominik;
Pimanda, John E.

Publication type:

Article

Simulated linear test applied to quantitative proteomics.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. i702, doi. 10.1093/bioinformatics/btw440

By:

Pham, T. V.;
Jimenez, C. R.

Publication type:

Article

DyNet: visualization and analysis of dynamic molecular interaction networks.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. 2713, doi. 10.1093/bioinformatics/btw187

By:

Goenawan, Ivan H.;
Bryan, Kenneth;
Lynn, David J.

Publication type:

Article

RIPPER: a framework for MS1 only metabolomics and proteomics label-free relative quantification.

Published in:

Bioinformatics, 2016, v. 32, n. 13, p. 2035, doi. 10.1093/bioinformatics/btw091

By:

Van Riper, Susan K.;
Higgins, LeeAnn;
Carlis, John V.;
Griffin, Timothy J.

Publication type:

Article

C-It-Loci: a knowledge database for tissue-enriched loci.

Published in:

Bioinformatics, 2015, v. 31, n. 21, p. 3537, doi. 10.1093/bioinformatics/btv410

By:

Weirick, Tyler;
John, David;
Dimmeler, Stefanie;
Uchida, Shizuka

Publication type:

Article

Alternative splicing and co-option of transposable elements: the case of TMPO/LAP2a and ZNF451 in mammals.

Published in:

Bioinformatics, 2015, v. 31, n. 14, p. 2257, doi. 10.1093/bioinformatics/btv132

By:

Abascal, Federico;
Tress, Michael L.;
Valencia, Alfonso

Publication type:

Article

Computational approaches towards understanding human long non-coding RNA biology.

Published in:

Bioinformatics, 2015, v. 31, n. 14, p. 2241, doi. 10.1093/bioinformatics/btv148

By:

Jalali, Saakshi;
Kapoor, Shruti;
Sivadas, Ambily;
Bhartiya, Deeksha;
Scaria, Vinod

Publication type:

Article

BioTextQuest+: a knowledge integration platform for literature mining and concept discovery.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3249, doi. 10.1093/bioinformatics/btu524

By:

Papanikolaou, Nikolas;
Pavlopoulos, Georgios A.;
Pafilis, Evangelos;
Theodosiou, Theodosios;
Schneider, Reinhard;
Satagopam, Venkata P.;
Promponas, Vasilis J.;
Iliopoulos, Ioannis;
Ouzounis, Christos A.;
Eliopoulos, Aristides G.

Publication type:

Article

AMASS: a database for investigating protein structures.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1595, doi. 10.1093/bioinformatics/btu073

By:

Mielke, Clinton J.;
Mandarino, Lawrence J.;
Dinu, Valentin

Publication type:

Article

The cleverSuite approach for protein characterization: predictions of structural properties, solubility, chaperone requirements and RNA-binding abilities.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1601, doi. 10.1093/bioinformatics/btu074

By:

Klus, Petr;
Bolognesi, Benedetta;
Agostini, Federico;
Marchese, Domenica;
Zanzoni, Andreas;
Tartaglia, Gian Gaetano

Publication type:

Article

DIVE: a data intensive visualization engine.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 593, doi. 10.1093/bioinformatics/btt721

By:

Bromley, Dennis;
Rysavy, Steven J.;
Su, Robert;
Toofanny, Rudesh D.;
Schmidlin, Tom;
Daggett, Valerie

Publication type:

Article

CluePedia Cytoscape plugin: pathway insights using integrated experimental and in silico data.

Published in:

Bioinformatics, 2013, v. 29, n. 5, p. 661, doi. 10.1093/bioinformatics/btt019

By:

Bindea, Gabriela;
Galon, Jérôme;
Mlecnik, Bernhard

Publication type:

Article

An unsupervised conditional random fields approach for clustering gene expression time series.

Published in:

Bioinformatics, 2008, v. 24, n. 21, p. 2467, doi. 10.1093/bioinformatics/btn375

By:

Chang-Tsun Li;
Yinyin Yuan;
Roland Wilson

Publication type:

Article

Predicting gene targets of perturbations via network-based filtering of mRNA expression compendia.

Published in:

Bioinformatics, 2008, v. 24, n. 21, p. 2482, doi. 10.1093/bioinformatics/btn476

By:

Elissa J. Cosgrove;
Yingchun Zhou;
Timothy S. Gardner;
Eric D. Kolaczyk

Publication type:

Article

Impacts of HLA Genetics on the SARS-CoV-2 Spike Proteins in the Arabian Population.

Published in:

COVID, 2025, v. 5, n. 4, p. 53, doi. 10.3390/covid5040053

By:

Haraka, Amal;
Mehta, Sanjay;
Al-Rousan, Tala

Publication type:

Article

Small RNA derived from Tobacco mosaic virus targets a host C2-domain abscisic acid-related (CAR) 7-like protein gene.

Published in:

Phytopathology Research, 2020, v. 2, n. 1, p. 1, doi. 10.1186/s42483-020-00058-7

By:

Guo, Song;
Wong, Sek-Man

Publication type:

Article

Dendritic cells: Coordinating motility and function.

Published in:

Nature Reviews Immunology, 2009, v. 9, n. 2, p. 73, doi. 10.1038/nri2493

By:

Leavy, Olive

Publication type:

Article

Biological and Molecular Characteristics of Potato Virus X Naturally Infected Potato Plants.

Published in:

Annals of Agricultural Science Moshtohor, 2021, v. 59, n. 4, p. 815, doi. 10.21608/assjm.2021.207884

By:

Hassan, Ghada A.;
Eisaa, Nawal A.;
R. N., Fawzy;
K. A., El Dougdoug;
Hassan, Eman O.

Publication type:

Article

TFG: a novel regulator of ULK1-dependent autophagy.

Published in:

Molecular & Cellular Oncology, 2021, v. 8, n. 4, p. 1, doi. 10.1080/23723556.2021.1945895

By:

Cecconi, Francesco;
Nazio, Francesca

Publication type:

Article

POLG2 deficiency causes adult-onset syndromic sensory neuropathy, ataxia and parkinsonism.

Published in:

Annals of Clinical & Translational Neurology, 2017, v. 4, n. 1, p. 4, doi. 10.1002/acn3.361

By:

Van Maldergem, Lionel;
Besse, Arnaud;
De Paepe, Boel;
Blakely, Emma L.;
Appadurai, Vivek;
Humble, Margaret M.;
Piard, Juliette;
Craig, Kate;
He, Langping;
Hella, Pierre;
Debray, François‐Guillaume;
Martin, Jean‐Jacques;
Gaussen, Marion;
Laloux, Patrice;
Stevanin, Giovanni;
Van Coster, Rudy;
Taylor, Robert W.;
Copeland, William C.;
Mormont, Eric;
Bonnen, Penelope E.

Publication type:

Article

Use of Posttranscription Gene Silencing in Squash to Induce Resistance against the Egyptian Isolate of the Squash Leaf Curl Virus.

Published in:

International Journal of Genomics, 2016, p. 1, doi. 10.1155/2016/6053147

By:

Taha, Omnia;
Farouk, Inas;
Abdallah, Abdelhadi;
Abdallah, Naglaa A.

Publication type:

Article

Identification and Expression Profiling of the BTB Domain-Containing Protein Gene Family in the Silkworm, Bombyx mori.

Published in:

International Journal of Genomics, 2014, p. 1, doi. 10.1155/2014/865065

By:

Daojun Cheng;
Wenliang Qian;
Meng Meng;
Yonghu Wang;
Jian Peng;
Qingyou Xia

Publication type:

Article

Glycated Serum Protein Genetics and Pleiotropy with Cardiometabolic Risk Factors.

Published in:

Journal of Diabetes Research, 2019, p. 1, doi. 10.1155/2019/2310235

By:

Johnson, Matthew P.;
Keyho, Ryan;
Blackburn, Nicholas B.;
Laston, Sandra;
Kumar, Satish;
Peralta, Juan;
Thapa, Suman S.;
Towne, Bradford;
Subedi, Janardan;
Blangero, John;
Williams-Blangero, Sarah

Publication type:

Article

Characterization of actin genes in Bonamia ostreae and their application to phylogeny of the Haplosporidia.

Published in:

Parasitology, 2007, v. 134, n. 14, p. 1941, doi. 10.1017/S0031182007003307

By:

LÓPEZ-FLORES, I.;
SUÁREZ-SANTIAGO, V. N.;
LONGET, D.;
SAULNIER, D.;
CHOLLET, B.;
ARZUL, I.

Publication type:

Article

High expression of class III β-tubulin in upper gastrointestinal cancer types.

Published in:

Oncology Letters, 2018, v. 16, n. 6, p. 7139, doi. 10.3892/ol.2018.9502

By:

Höflmayer, Doris;
Öztürk, Eray;
Schroeder, Cornelia;
Hube-Magg, Claudia;
Blessin, Niclas C.;
Simon, Ronald;
Lang, Dagmar S.;
Neubauer, Emily;
Göbel, Cosima;
Heinrich, Marie-Christine;
Fraune, Christoph;
Möller, Katharina;
Armbrust, Moritz;
Freytag, Morton;
Hinsch, Andrea;
Lühr, Clara;
Noack, Magdalena;
Reiswich, Viktor;
Weidemann, Sören;
Bockhorn, Maximilian

Publication type:

Article

Shank-associated RH domain-interacting protein expression is upregulated in entodermal and mesodermal cancer or downregulated in ectodermal malignancy.

Published in:

Oncology Letters, 2018, v. 16, n. 6, p. 7180, doi. 10.3892/ol.2018.9514

By:

Liang, Yanhua;
Chen, Biao;
Liu, Fen;
Wang, Jiaman;
Yang, Yao;
Zheng, Yan;
Tan, Shicui

Publication type:

Article

Relationship between the genetic expression of WTAP and bladder cancer and patient prognosis.

Published in:

Oncology Letters, 2018, v. 16, n. 6, p. 6966, doi. 10.3892/ol.2018.9554

By:

Chen, Lezhong;
Wang, Xinghuan

Publication type:

Article

Short interfering RNA‑mediated silencing of actin‑related protein 2/3 complex subunit 4 inhibits the migration of SW620 human colorectal cancer cells.

Published in:

Oncology Letters, 2018, v. 15, n. 3, p. 2847, doi. 10.3892/ol.2017.7642

By:

Su, Xiaojuan;
Wang, Siyang;
Huo, Yongxu;
Yang, Chunlei

Publication type:

Article