Works matching IS 26737647 AND DT 2024

Results: 82

Unlocking the future of complex human diseases prediction: multi-omics risk score breakthrough.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1510352
By:
- Kidenya, Benson R.;
- Mboowa, Gerald
Publication type:
Article
Completing a molecular timetree of primates.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1495417
By:
- Craig, Jack M.;
- Hedges, S. Blair;
- Kumar, Sudhir
Publication type:
Article
Time-calibrated phylogeny of neotropical freshwater fishes.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1433995
By:
- Tagliacollo, Victor A.;
- Tan, Milton;
- Reis, Roberto E.;
- Gaia, Ronielson;
- Carrijo, Virgilio;
- Ranuzi, Marcelo;
- Craig, Jack M.;
- Albert, James S.
Publication type:
Article
Benchmarking of Hi-C tools for scaffolding plant genomes obtained from PacBio HiFi and ONT reads.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1462923
By:
- Obinu, Lia;
- Trivedi, Urmi;
- Porceddu, Andrea
Publication type:
Article
Climatic factors, but not geographic distance, promote genetic structure and differentiation of Cleistogenes squarrosa (Trin.) Keng populations.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1454689
By:
- Song, Ruyan;
- Zhang, Xueli;
- Zhang, Zhuo;
- Zhou, Chan
Publication type:
Article
Quantification of muscle fiber malformations using edge detection to investigate chronic muscle pressure ulcers.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1450146
By:
- Ong, Charlene Z. L.;
- Nasir, N. Jannah M.;
- Welsch, Roy E.;
- Tucker-Kellogg, Lisa;
- Rajapakse, Jagath C.
Publication type:
Article
Identification of novel drug targets for Helicobacter pylori: structure-based virtual screening of potential inhibitors against DAH7PS protein involved in the shikimate pathway.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1482338
By:
- Goodarzi, Narjes Noori;
- Asforooshani, Mahshid Khazani;
- Shahbazi, Behzad;
- Rahimi, Nayereh Rezaie;
- Badmasti, Farzad
Publication type:
Article
DCMA: faster protein backbone dihedral angle prediction using a dilated convolutional attention-based neural network.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1477909
By:
- Buzhong Zhang;
- Meili Zheng;
- Yuzhou Zhang;
- Lijun Quan
Publication type:
Article
Computational identification and characterization of chitinase 1 and chitinase 2 from neotropical isolates of Beauveria bassiana.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1434442
By:
- Segura-Vega, Juan;
- González-Herrera, Allan;
- Molina-Bravo, Ramón;
- Solano-González, Stefany
Publication type:
Article
Editorial: Women in bioinformatics.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1499514
By:
- Martínez-Flores, Irma;
- Cárdenas Carvajal, Constanza;
- Monje-Galvan, Viviana
Publication type:
Article
In silico PCR analysis: a comprehensive bioinformatics tool for enhancing nucleic acid amplification assays.
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1464197
By:
- Kalendar, Ruslan;
- Shevtsov, Alexandr;
- Otarbay, Zhenis;
- Ismailova, Aisulu
Publication type:
Article
Discovery of plasma biomarkers related to blood-brain barrier dysregulation in Alzheimer's disease.
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1463001
By:
- Yuet Ruh Dan;
- Keng-Hwee Chiam
Publication type:
Article
A time-calibrated phylogeny of the diversification of Holoadeninae frogs.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1441373
By:
- Chaves, Júlio C. M.;
- Hepp, Fábio;
- Schrago, Carlos G.;
- Mello, Beatriz
Publication type:
Article
SciJava Ops: an improved algorithms framework for Fiji and beyond.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1435733
By:
- Selzer, Gabriel J.;
- Rueden, Curtis T.;
- Hiner, Mark C.;
- Evans, Edward L.;
- Kolb, David;
- Wiedenmann, Marcel;
- Birkhold, Christian;
- Buchholz, Tim-Oliver;
- Helfrich, Stefan;
- Northan, Brian;
- Walter, Alison;
- Schindelin, Johannes;
- Pietzsch, Tobias;
- Saalfeld, Stephan;
- Berthold, Michael R.;
- Eliceiri, Kevin W.
Publication type:
Article
QSPRmodeler - An open source application for molecular predictive analytics.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1441024
By:
- Bachorz, Rafał A.;
- Nowak, Damian;
- Ratajewski, Marcin
Publication type:
Article
The quantum hypercube as a k-mer graph.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1401223
By:
- Becerra-Gavino, Gustavo;
- Barbosa-Santillan, Liliana Ibeth
Publication type:
Article
A review of model evaluation metrics for machine learning in genetics and genomics.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1457619
By:
- Miller, Catriona;
- Portlock, Theo;
- Nyaga, Denis M.;
- O'Sullivan, Justin M.
Publication type:
Article
Visual analysis of multi-omics data.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1395981
By:
- Swart, Austin;
- Caspi, Ron;
- Paley, Suzanne;
- Karp, Peter D.
Publication type:
Article
Molecular docking and molecular dynamic simulation studies to identify potential terpenes against Internalin A protein of Listeria monocytogenes.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1463750
By:
- K., Deepasree;
- Venugopal, Subhashree
Publication type:
Article
PhIP-Seq: methods, applications and challenges.
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1424202
By:
- Ziru Huang;
- Samarappuli Mudiyanselage Savini Gunarathne;
- Wenwen Liu;
- Yuwei Zhou;
- Yuqing Jiang;
- Shiqi Li;
- Jian Huang
Publication type:
Article
Rvisdiff: An R package for interactive visualization of differential expression.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1349205
By:
- Barrios, David;
- Prieto, Carlos
Publication type:
Article
Rhizobium etli CFN42 and Sinorhizobium meliloti 1021 bioinformatic transcriptional regulatory networks from culture and symbiosis.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1419274
By:
- Taboada-Castro, Hermenegildo;
- José Hernández-Álvarez, Alfredo;
- Miguel Escorcia-Rodríguez, Juan;
- Augusto Freyre-González, Julio;
- Galán-Vásquez, Edgardo;
- Encarnación-Guevara, Sergio
Publication type:
Article
Design principles for molecular animation.
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1353807
By:
- Jantzen, Stuart G.;
- McGill, Gaël;
- Jenkinson, Jodie
Publication type:
Article
Supplementary Material.
Published in:
Frontiers in Bioinformatics, 2024, p. 1
Publication type:
Article
Editorial: Big data and artificial intelligence for genomics and therapeutics - Proceedings of the 19th Annual Meeting of the MidSouth Computational Biology and Bioinformatics Society (MCBIOS).
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1470107
By:
- Huixiao Hong;
- Toby-Ogundeji, Inimary;
- Doerksen, Robert J.;
- Zhaohui Steve Qin
Publication type:
Article
Editorial: Machine learning approaches to antimicrobials: discovery and resistance.
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1458237
By:
- Broschat, Shira L.;
- Siu, Shirley W. I.;
- de la Fuente-Nunez, Cesar
Publication type:
Article
In silico studies of benzothiazole derivatives as potential inhibitors of Anopheles funestus and Anopheles gambiae trehalase.
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1428539
By:
- Ogunnupebi, Temitope A.;
- Oduselu, Gbolahan O.;
- Elebiju, Oluwadunni F.;
- Ajani, Olayinka O.;
- Adebiyi, Ezekiel
Publication type:
Article
RIPS (rapid intuitive pathogen surveillance): a tool for surveillance of genome sequence data from foodborne bacterial pathogens.
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1415078
By:
- Muruvanda, Tim;
- Rand, Hugh;
- Pettengill, James;
- Pightling, Arthur
Publication type:
Article
A hybrid approach for predicting transcription factors.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1425419
By:
- Patiyal, Sumeet;
- Tiwari, Palak;
- Ghai, Mohit;
- Dhapola, Aman;
- Dhall, Anjali;
- Raghava, Gajendra P. S.
Publication type:
Article
Predictive identification and design of potent inhibitors targeting resistance-inducing candidate genes from E. coli whole-genome sequences.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1411935
By:
- Aborode, Abdullahi Tunde;
- Kumar, Neeraj;
- Olowosoke, Christopher Busayo;
- Ibisanmi, Tope Abraham;
- Ayoade, Islamiyyah;
- Umar, Haruna Isiyaku;
- Jamiu, Abdullahi Temitope;
- Bolarinwa, Basit;
- Olapade, Zainab;
- Idowu, Abidemi Ruth;
- Adelakun, Ibrahim O.;
- Onifade, Isreal Ayobami;
- Akangbe, Benjamin;
- Abacheng, Modesta;
- Ikhimiukor, Odion O.;
- Awaji, Aeshah A.;
- Adesola, Ridwan Olamilekan
Publication type:
Article
AUTO-TUNE: selecting the distance threshold for inferring HIV transmission clusters.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1400003
By:
- Weaver, Steven;
- Dávila Conn, Vanessa M.;
- Ji, Daniel;
- Verdonk, Hannah;
- Ávila-Ríos, Santiago;
- Brown, Andrew J. Leigh;
- Wertheim, Joel O.;
- Pond, Sergei L. Kosakovsky
Publication type:
Article
CAEM-GBDT: a cancer subtype identifying method using multi-omics data and convolutional autoencoder network.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1403826
By:
- Jiquan Shen;
- Xuanhui Guo;
- Hanwen Bai;
- Junwei Luo
Publication type:
Article
A systematic overview of single-cell transcriptomics databases, their use cases, and limitations.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1417428
By:
- Gondal, Mahnoor N.;
- Rehman Shah, Saad Ur;
- Chinnaiyan, Arul M.;
- Cieslik, Marcin
Publication type:
Article
Network analysis of driver genes in human cancers.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1365200
By:
- Patil, Shruti S.;
- Roberts, Steven A.;
- Gebremedhin, Assefaw H.
Publication type:
Article
DNA structural features and variability of complete MHC locus sequences.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1392613
By:
- Wassenaar, Trudy M.;
- Harville, Terry;
- Chastain, Jonathan;
- Wanchai, Visanu;
- Ussery, David W.
Publication type:
Article
Maximum-scoring path sets on pangenome graphs of constant treewidth.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1391086
By:
- Brejová, Broňa;
- Gagie, Travis;
- Herencsárová, Eva;
- Vinař, Tomáš
Publication type:
Article
The evolution of mammalian Rem2: unraveling the impact of purifying selection and coevolution on protein function, and implications for human disorders.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1381540
By:
- Lucaci, Alexander G.;
- Brew, William E.;
- Lamanna, Jason;
- Selberg, Avery;
- Carnevale, Vincenzo;
- Moore, Anna R.;
- Pond, Sergei L. Kosakovsky
Publication type:
Article
The evolution of mammalian Rem2: unraveling the impact of purifying selection and coevolution on protein function, and implications for human disorders.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1381540
By:
- Lucaci, Alexander G.;
- Brew, William E.;
- Lamanna, Jason;
- Selberg, Avery;
- Carnevale, Vincenzo;
- Moore, Anna R.;
- Pond, Sergei L. Kosakovsky
Publication type:
Article
A comprehensive multi-omics analysis reveals unique signatures to predict Alzheimer's disease.
Published in:
Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1390607
By:
- Vacher, Michael;
- Canovas, Rodrigo;
- Laws, Simon M.;
- Doecke, James D.
Publication type:
Article
Effects of highly active antiretroviral therapy initiation on epigenomic DNA methylation in persons living with HIV.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1357889
By:
- Zhang, Joshua;
- Sehl, Mary E.;
- Shih, Roger;
- Breen, Elizabeth Crabb;
- Fengxue Li;
- Lu, Ake T.;
- Bream, Jay H.;
- Duggal, Priya;
- Martinson, Jeremy;
- Wolinsky, Steven M.;
- Martinez-Maza, Otoniel;
- Ramirez, Christina M.;
- Horvath, Steve;
- Jamieson, Beth D.
Publication type:
Article
Decreased but persistent epigenetic age acceleration is associated with changes in T-cell subsets after initiation of highly active antiretroviral therapy in persons living with HIV.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1356509
By:
- Sehl, Mary E.;
- Breen, Elizabeth Crabb;
- Shih, Roger;
- Fengxue Li;
- Zhang, Joshua;
- Langfelder, Peter;
- Horvath, Steve;
- Bream, Jay H.;
- Duggal, Priya;
- Martinson, Jeremy;
- Wolinsky, Steven M.;
- Martinez-Maza, Otoniel;
- Ramirez, Christina M.;
- Jamieson, Beth D.
Publication type:
Article
Human cytokine and coronavirus nucleocapsid protein interactivity using large-scale virtual screens.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1397968
By:
- Tomezsko, Phillip J.;
- Ford, Colby T.;
- Meyer, Avery E.;
- Michaleas, Adam M.;
- Jaimes III, Rafael
Publication type:
Article
Pathway-based analyses of gene expression profiles at low doses of ionizing radiation.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1280971
By:
- Xihaier Luo;
- Niyakan, Seyednami;
- Johnstone, Patrick;
- McCorkle, Sean;
- Park, Gilchan;
- López-Marrero, Vanessa;
- Shinjae Yoo;
- Dougherty, Edward R.;
- Xiaoning Qian;
- Alexander, Francis J.;
- Jha, Shantenu;
- Byung-Jun Yoon
Publication type:
Article
Editorial: Computational methods for analysis of DNA methylation data, volume II.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1415791
By:
- Di Lena, Pietro;
- Nardini, Christine;
- Pellegrini, Matteo
Publication type:
Article
PAGER-scFGA: unveiling cell functions and molecular mechanisms in cell trajectories through single-cell functional genomics analysis.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1336135
By:
- Fengyuan Huang;
- Welner, Robert S.;
- Chen, Jake Y.;
- Zongliang Yue
Publication type:
Article
From complex data to clear insights: visualizing molecular dynamics trajectories.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1356659
By:
- Belghit, Hayet;
- Spivak, Mariano;
- Dauchez, Manuel;
- Baaden, Marc;
- Jonquet-Prevoteau, Jessica
Publication type:
Article
Prediction of polyspecificity from antibody sequence data by machine learning.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2023.1286883
By:
- Éliás, Szabolcs;
- Wrzodek, Clemens;
- Deane, Charlotte M.;
- Tissot, Alain C.;
- Klostermann, Stefan;
- Ros, Francesca
Publication type:
Article
BayesAge: A maximum likelihood algorithm to predict epigenetic age.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1329144
By:
- Mboning, Lajoyce;
- Rubbi, Liudmilla;
- Thompson, Michael;
- Bouchard, Louis-S.;
- Pellegrini, Matteo
Publication type:
Article
bootGSEA: a bootstrap and rank aggregation pipeline for multi-study and multi-omics enrichment analyses.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1380928
By:
- Shamini Hemandhar Kuma;
- Ines Tapken;
- Daniela Kuhn;
- Peter Claus;
- Klaus Jung
Publication type:
Article
A systematic evaluation of state-of-the-art deconvolution methods in spatial transcriptomics: insights from cardiovascular disease and chronic kidney disease.
Published in:
Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1352594
By:
- Slabowska, Alban Obel;
- Pyke, Charles;
- Hvid, Henning;
- Jessen, Leon Eyrich;
- Baumgart, Simon;
- Das, Vivek
Publication type:
Article