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Plant centromeric retrotransposons: a structural and cytogenetic perspective.
- Published in:
- Mobile DNA, 2011, v. 2, n. 1, p. 1, doi. 10.1186/1759-8753-2-4
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- Article
Characterization of Stowaway MITEs in pea (Pisum sativum L.) and identification of their potential master elements.
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- Genome, 2005, v. 48, n. 5, p. 831, doi. 10.1139/G05-047
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- Article
Molecular and cytogenetic analysis of repetitive DNA in pea (Pisum sativum L.).
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- Genome, 2001, v. 44, n. 4, p. 716, doi. 10.1139/g01-056
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- Article
Super-Resolution Microscopy Reveals Diversity of Plant Centromere Architecture.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 10, p. 3488, doi. 10.3390/ijms21103488
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- Article
The Dark Matter of Large Cereal Genomes: Long Tandem Repeats.
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- International Journal of Molecular Sciences, 2019, v. 20, n. 10, p. 2483, doi. 10.3390/ijms20102483
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- Article
PIGY, a new plant envelope-class LTR retrotransposon.
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- Molecular Genetics & Genomics, 2005, v. 273, n. 1, p. 43, doi. 10.1007/s00438-004-1092-7
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- Article
DANTE and DANTE_LTR: lineage-centric annotation pipelines for long terminal repeat retrotransposons in plant genomes.
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- NAR Genomics & Bioinformatics, 2024, v. 6, n. 3, p. 1, doi. 10.1093/nargab/lqae113
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- Article
Significant Expansion of Vicia pannonica Genome Size Mediated by Amplification of a Single Type of Giant Retroelement.
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- Genetics, 2006, v. 173, n. 2, p. 1047, doi. 10.1534/genetics.106.056259
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- Article
Sobo, a Recently Amplified Satellite Repeat of Potato, and Its Implications for the Origin of Tandemly Repeated Sequences.
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- Genetics, 2005, v. 170, n. 3, p. 1231, doi. 10.1534/genetics.105.041087
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- Article
Differential Genome Size and Repetitive DNA Evolution in Diploid Species of Melampodium sect. Melampodium (Asteraceae).
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- Frontiers in Plant Science, 2020, p. 1, doi. 10.3389/fpls.2020.00362
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- Article
Mitotic Spindle Attachment to the Holocentric Chromosomes of Cuscuta europaea Does Not Correlate With the Distribution of CENH3 Chromatin.
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- Frontiers in Plant Science, 2020, v. 10, p. 1, doi. 10.3389/fpls.2019.01799
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- Article
TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads.
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- Nucleic Acids Research, 2017, v. 45, n. 12, p. 1, doi. 10.1093/nar/gkx257
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- Article
Implementing microarrays for the study of plant genomics.
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- 1999
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- Abstract
KNL1 and NDC80 represent new universal markers for the detection of functional centromeres in plants.
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- Chromosome Research, 2024, v. 32, n. 1, p. 1, doi. 10.1007/s10577-024-09747-x
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- Article
Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes.
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- Chromosome Research, 2008, v. 16, n. 7, p. 961, doi. 10.1007/s10577-008-1254-2
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- Article
Characterization of repeat arrays in ultra‐long nanopore reads reveals frequent origin of satellite DNA from retrotransposon‐derived tandem repeats.
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- Plant Journal, 2020, v. 101, n. 2, p. 484, doi. 10.1111/tpj.14546
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- Article
Genome invasion by a hypomethylated satellite repeat in Australian crucifer Ballantinia antipoda.
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- Plant Journal, 2019, v. 99, n. 6, p. 1066, doi. 10.1111/tpj.14380
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- Article
Centromere and telomere sequence alterations reflect the rapid genome evolution within the carnivorous plant genus Genlisea.
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- Plant Journal, 2015, v. 84, n. 6, p. 1087, doi. 10.1111/tpj.13058
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- Article
Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences.
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- Plant Journal, 2013, v. 74, n. 5, p. 829, doi. 10.1111/tpj.12168
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- Article
The holocentric species Luzula elegans shows interplay between centromere and large-scale genome organization.
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- Plant Journal, 2013, v. 73, n. 4, p. 555, doi. 10.1111/tpj.12054
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- Article
Holocentromeres can consist of merely a few megabase-sized satellite arrays.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38922-7
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- Article
Fine structure and transcription dynamics of bread wheat ribosomal DNA loci deciphered by a multi‐omics approach.
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- Plant Genome, 2022, v. 15, n. 1, p. 1, doi. 10.1002/tpg2.20191
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- Article
In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae.
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- PLoS ONE, 2015, v. 10, n. 11, p. 1, doi. 10.1371/journal.pone.0143424
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- Article
Genome-Wide Analysis of Repeat Diversity across the Family Musaceae.
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- PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0098918
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- Article
Independent, Rapid and Targeted Loss of Highly Repetitive DNA in Natural and Synthetic Allopolyploids of Nicotiana tabacum.
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- PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036963
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- Article
Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia.
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- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027335
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- Article
Repeat Composition of CenH3-chromatin and H3K9me2-marked heterochromatin in Sugar Beet (Beta vulgaris).
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- BMC Plant Biology, 2016, v. 16, p. 1, doi. 10.1186/s12870-016-0805-5
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- Article
Repetitive part of the banana (Musa acuminata) genome investigated by low-depth 454 sequencing.
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- BMC Plant Biology, 2010, v. 10, p. 204, doi. 10.1186/1471-2229-10-204
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- Article
Survey of extrachromosomal circular DNA derived from plant satellite repeats.
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- BMC Plant Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2229-8-90
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- Article
Primed in situ labelling facilitates flow sorting of similar sized chromosomes.
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- Plant Journal, 1995, v. 7, n. 6, p. 1039, doi. 10.1046/j.1365-313X.1995.07061039.x
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- Article
Localization of vicilin genes via polymerase chain reaction on microisolated field bean chromosomes.
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- Plant Journal, 1993, v. 3, n. 6, p. 883
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- Article
Differential amplification of satellite PaB6 in chromosomally hypervariable Prospero autumnale complex (Hyacinthaceae).
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- Annals of Botany, 2014, v. 114, n. 8, p. 1597, doi. 10.1093/aob/mcu178
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- Article
Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies.
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- Annals of Botany, 2011, v. 107, n. 2, p. 255
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- Article
Arabidopsis CBF5 interacts with the H/ACA snoRNP assembly factor NAF1.
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- Plant Molecular Biology, 2007, v. 65, n. 5, p. 615, doi. 10.1007/s11103-007-9226-z
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- Article
Graph-based clustering and characterization ofrepetitive sequences in next-generationsequencing data.
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- BMC Bioinformatics, 2010, v. 11, p. 378, doi. 10.1186/1471-2105-11-378
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- Article
Centromeres Off the Hook: Massive Changes in Centromere Size and Structure Following Duplication of CenH3 Gene in Fabeae Species.
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- Molecular Biology & Evolution, 2015, v. 32, n. 7, p. 1862, doi. 10.1093/molbev/msv070
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- Article
Next-Generation Sequencing Reveals the Impact of Repetitive DNA Across Phylogenetically Closely Related Genomes of Orobanchaceae.
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- Molecular Biology & Evolution, 2012, v. 29, n. 11, p. 3601
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- Article
Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres.
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- Plant Cell, 2014, v. 26, n. 4, p. 1436, doi. 10.1105/tpc.114.123877
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- Article
Nondisjunction in Favor of a Chromosome: The Mechanism of Rye B Chromosome Drive during Pollen Mitosis.
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- Plant Cell, 2012, v. 24, n. 10, p. 4124, doi. 10.1105/tpc.112.105270
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- Article
Repeatless and Repeat-Based Centromeres in Potato: Implications for Centromere Evolution.
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- Plant Cell, 2012, v. 24, n. 9, p. 3559, doi. 10.1105/tpc.112.100511
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- Publication type:
- Article
Haplotype Detection from Next-Generation Sequencing in High-Ploidy-Level Species: 45S rDNA Gene Copies in the Hexaploid Spartina maritima.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 1, p. 29, doi. 10.1534/g3.115.023242
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- Publication type:
- Article
Systematic survey of plant LTR-retrotransposons elucidates phylogenetic relationships of their polyprotein domains and provides a reference for element classification.
- Published in:
- Mobile DNA, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1186/s13100-018-0144-1
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- Publication type:
- Article
Contrasting Patterns of Transposable Element and Satellite Distribution on Sex Chromosomes (XY1Y2) in the Dioecious Plant Rumex acetosa.
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- Genome Biology & Evolution, 2013, v. 5, n. 4, p. 769, doi. 10.1093/gbe/evt049
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- Publication type:
- Article
Survey Sequencing Reveals Elevated DNA Transposon Activity, Novel Elements, and Variation in Repetitive Landscapes among Vesper Bats.
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- Genome Biology & Evolution, 2012, v. 4, n. 9, p. 575, doi. 10.1093/gbe/evs038
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- Publication type:
- Article
Survey Sequencing Reveals Elevated DNA Transposon Activity, Novel Elements, and Variation in Repetitive Landscapes among Vesper Bats.
- Published in:
- Genome Biology & Evolution, 2012, v. 4, n. 4, p. 575, doi. 10.1093/gbe/evs038
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- Publication type:
- Article
Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs.
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- Molecular Biology & Evolution, 2011, v. 28, n. 10, p. 2843, doi. 10.1093/molbev/msr112
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- Article
Transcription and Evolutionary Dynamics of the Centromeric Satellite Repeat CentO in Rice.
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- Molecular Biology & Evolution, 2006, v. 23, n. 12, p. 2505, doi. 10.1093/molbev/msl127
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- Publication type:
- Article
Chromosome-scale genome assembly for the duckweed Spirodela intermedia, integrating cytogenetic maps, PacBio and Oxford Nanopore libraries.
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- Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-75728-9
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- Article
The ecology of palm genomes: repeat‐associated genome size expansion is constrained by aridity.
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- New Phytologist, 2022, v. 236, n. 2, p. 433, doi. 10.1111/nph.18323
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- Article
Impact of parasitic lifestyle and different types of centromere organization on chromosome and genome evolution in the plant genus Cuscuta.
- Published in:
- New Phytologist, 2021, v. 229, n. 4, p. 2365, doi. 10.1111/nph.17003
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- Article