Works matching AU Mu, Yuguang

Results: 75

Structural bioinformatics: Fast, accurate, and reliable molecular docking with QuickVina 2.

Published in:

Bioinformatics, 2015, v. 31, n. 13, p. 2214, doi. 10.1093/bioinformatics/btv082

By:

Amr Alhossary;
Stephanus Daniel Handoko;
Yuguang Mu;
Chee-Keong Kwoh

Publication type:

Article

SARS-CoV-2 accessory protein 7b forms homotetramers in detergent.

Published in:

Virology Journal, 2022, v. 19, n. 1, p. 1, doi. 10.1186/s12985-022-01920-0

By:

Surya, Wahyu;
Queralt-Martin, Maria;
Mu, Yuguang;
Aguilella, Vicente M.;
Torres, Jaume

Publication type:

Article

Single Disulfide Bond in Host Defense Thanatin Analog Peptides: Antimicrobial Activity, Atomic-Resolution Structures and Target Interactions.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 1, p. 51, doi. 10.3390/ijms26010051

By:

Abdullah, Swaleeha Jaan;
Guan, Jia Sheng;
Mu, Yuguang;
Bhattacharjya, Surajit

Publication type:

Article

Erratum to: The role of pro-inflammatory S100A9 in Alzheimer's disease amyloid-neuroinflammatory cascade.

Published in:

2014

By:

Wang, Chao;
Klechikov, Alexey;
Gharibyan, Anna;
Wärmländer, Sebastian;
Jarvet, Jüri;
Zhao, Lina;
Jia, Xueen;
Narayana, Vinod;
Shankar, S.;
Olofsson, Anders;
Brännström, Thomas;
Mu, Yuguang;
Gräslund, Astrid;
Morozova-Roche, Ludmilla

Publication type:

Erratum

The role of pro-inflammatory S100A9 in Alzheimer's disease amyloid-neuroinflammatory cascade.

Published in:

Acta Neuropathologica, 2014, v. 127, n. 4, p. 507, doi. 10.1007/s00401-013-1208-4

By:

Wang, Chao;
Klechikov, Alexey;
Gharibyan, Anna;
Wärmländer, Sebastian;
Jarvet, Jüri;
Zhao, Lina;
Jia, Xueen;
Shankar, S.;
Olofsson, Anders;
Brännström, Thomas;
Mu, Yuguang;
Gräslund, Astrid;
Morozova-Roche, Ludmilla

Publication type:

Article

Synthesis of Spin-Labeled RNAS for Long Range Distance Measurements by Peldor.

Published in:

Nucleosides, Nucleotides & Nucleic Acids, 2005, v. 24, n. 5-7, p. 771, doi. 10.1081/NCN-200060139

By:

Piton, Nelly;
Schiemann, Olav;
Yuguang Mu;
Stock, Gerhard;
Prisner, Thomas;
Engels, Joachim

Publication type:

Article

Structures, Interactions and Activity of the N-Terminal Truncated Variants of Antimicrobial Peptide Thanatin.

Published in:

Antibiotics (2079-6382), 2024, v. 13, n. 1, p. 74, doi. 10.3390/antibiotics13010074

By:

Abdullah, Swaleeha Jaan;
Mu, Yuguang;
Bhattacharjya, Surajit

Publication type:

Article

Dynamically-Driven Enhancement of the Catalytic Machinery of the SARS 3C-Like Protease by the S284-T285-I286/A Mutations on the Extra Domain.

Published in:

PLoS ONE, 2014, v. 9, n. 7, p. 1, doi. 10.1371/journal.pone.0101941

By:

Lim, Liangzhong;
Shi, Jiahai;
Mu, Yuguang;
Song, Jianxing

Publication type:

Article

Effect of Self-Assembly of Fullerene Nano-Particles on Lipid Membrane.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0077436

By:

Zhang, Saiqun;
Mu, Yuguang;
Zhang, John Z. H.;
Xu, Weixin

Publication type:

Article

Locking the 150-Cavity Open: In Silico Design and Verification of Influenza Neuraminidase Inhibitors.

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0073344

By:

Han, Nanyu;
Mu, Yuguang

Publication type:

Article

Plasticity of 150-Loop in Influenza Neuraminidase Explored by Hamiltonian Replica Exchange Molecular Dynamics Simulations.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0060995

By:

Han, Nanyu;
Mu, Yuguang

Publication type:

Article

The Natively Disordered Loop of Bcl-2 Undergoes Phosphorylation-Dependent Conformational Change and Interacts with Pin1.

Published in:

PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0052047

By:

Kang, CongBao;
Bharatham, Nagakumar;
Joel Chia;
Yuguang Mu;
Baek, Kwanghee;
Ho Sup Yoon

Publication type:

Article

Weak Glycolipid Binding of a Microdomain-Tracer Peptide Correlates with Aggregation and Slow Diffusion on Cell Membranes.

Published in:

PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0051222

By:

Lauterbach, Tim;
Manna, Manoj;
Ruhnow, Maria;
Wisantoso, Yudi;
Wang, Yaofeng;
Matysik, Artur;
Oglęcka, Kamila;
Yuguang Mu;
Geifman-Shochat, Susana;
Wohland, Thorsten;
Kraut, Rachel

Publication type:

Article

Exploring the Mechanism of Zanamivir Resistance in a Neuraminidase Mutant: A Molecular Dynamics Study.

Published in:

PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0044057

By:

Nanyu Han;
Xuewei Liu;
Yuguang Mu;
Khudyakov, Yury E.

Publication type:

Article

Initial Binding of Ions to the Interhelical Loops of Divalent Ion Transporter CorA: Replica Exchange Molecular Dynamics Simulation Study.

Published in:

PLoS ONE, 2012, v. 7, n. 8, p. 1, doi. 10.1371/journal.pone.0043872

By:

Tong Zhang;
Yuguang Mu;
Permyakov, Eugene A.

Publication type:

Article

Lipid Interaction and Membrane Perturbation of Human Islet Amyloid Polypeptide Monomer and Dimer by Molecular Dynamics Simulations.

Published in:

PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0038191

By:

Yun Zhang;
Yin Luo;
Yonghua Deng;
Yuguang Mu;
Guanghong Wei

Publication type:

Article

Intrinsic Determinants of A&bgr;12-24 pH-Dependent Self-Assembly Revealed by Combined Computational and Experimental Studies.

Published in:

PLoS ONE, 2011, v. 6, n. 9, p. 1, doi. 10.1371/journal.pone.0024329

By:

Weixin Xu;
Ce Zhang;
Derreumaux, Philippe;
Gräslund, Astrid;
Morozova-Roche, Ludmilla;
Yuguang Mu

Publication type:

Article

Molecular Dynamics Simulation of Ligand Dissociation from Liver Fatty Acid Binding Protein.

Published in:

PLoS ONE, 2009, v. 4, n. 6, p. 1, doi. 10.1371/journal.pone.0006081

By:

Dong Long;
Yuguang Mu;
Daiwen Yang

Publication type:

Article

Structural insights into physiological activation and antagonism of melanin-concentrating hormone receptor MCHR1.

Published in:

Cell Discovery, 2024, v. 10, n. 1, p. 1, doi. 10.1038/s41421-024-00754-0

By:

Ye, Xiaofan;
Liu, Guibing;
Li, Xiu;
He, Binbin;
Tao, Yuyong;
Guan, Jiasheng;
Mu, Yuguang;
Liu, Haiping;
Gong, Weimin

Publication type:

Article

Cholesterol-stabilized membrane-active nanopores with anticancer activities.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33639-5

By:

Shen, Jie;
Gu, Yongting;
Ke, Lingjie;
Zhang, Qiuping;
Cao, Yin;
Lin, Yuchao;
Wu, Zhen;
Wu, Caisheng;
Mu, Yuguang;
Wu, Yun-Long;
Ren, Changliang;
Zeng, Huaqiang

Publication type:

Article

Electroflocculation of indigo dyeing wastewater from industrial production: Flocs growth and adsorption mechanism.

Published in:

Arabian Journal of Chemistry, 2023, v. 16, n. 12, p. N.PAG, doi. 10.1016/j.arabjc.2023.105335

By:

Zhang, Wei;
Yao, Jiming;
Mu, Yuguang;
Zhang, Mengdi

Publication type:

Article

Engineered Reactive Oxygen Species (ROS)‐Responsive Artificial H+/Cl− Ion Channels for Targeted Cancer Treatment.

Published in:

Angewandte Chemie International Edition, 2025, v. 64, n. 7, p. 1, doi. 10.1002/anie.202419800

By:

Jia, Chunyan;
Luo, Daoxin;
Zhou, Jin;
Xie, Xiaopan;
Yuen In Lam, Hilbert;
Li, Pengzhe;
Mu, Yuguang;
Zeng, Zhiping;
Ren, Changliang

Publication type:

Article

Concentration‐Driven Evolution of Adaptive Artificial Ion Channels or Nanopores with Specific Anticancer Activities.

Published in:

Angewandte Chemie International Edition, 2024, v. 63, n. 17, p. 1, doi. 10.1002/anie.202318811

By:

Chen, Zhiqing;
Xie, Xiaopan;
Jia, Chunyan;
Zhong, Qishuo;
Zhang, Qiuping;
Luo, Daoxin;
Cao, Yin;
Mu, Yuguang;
Ren, Changliang

Publication type:

Article

Unraveling the molecular mechanism of FgGcn5 inhibition by phenazine‐1‐carboxamide: combined in silico and in vitro studies.

Published in:

Pest Management Science, 2025, v. 81, n. 2, p. 937, doi. 10.1002/ps.8496

By:

Li, Lei;
Luo, Qing;
Yang, Shuai;
Wang, Hancheng;
Mu, Yuguang;
Guo, Jingjing;
Zhang, Feng

Publication type:

Article

Use of a Chondroitin Sulfate Isomer as an Effective and Removable Dispersant of Single-Walled Carbon Nanotubes.

Published in:

Small, 2011, v. 7, n. 19, p. 2758, doi. 10.1002/smll.201100708

By:

Yan, Liang Yu;
Li, Weifeng;
Mesgari, Sara;
Leong, Susanna S. J.;
Chen, Yuan;
Loo, Leslie S.;
Mu, Yuguang;
Chan-Park, Mary B.

Publication type:

Article

Enrichment of (8,4) Single-Walled Carbon Nanotubes Through Coextraction with Heparin.

Published in:

Small, 2010, v. 6, n. 1, p. 110, doi. 10.1002/smll.200900865

By:

Yan, Liang Yu;
Li, Weifeng;
Fan, Xiao Feng;
Wei, Li;
Chen, Yuan;
Kuo, Jer-Lai;
Li, Lain-Jong;
Kwak, Sang Kyu;
Mu, Yuguang;
Chan-Park, M. B.

Publication type:

Article

Increased Microbial Butanol Tolerance by Exogenous Membrane Insertion Molecules.

Published in:

ChemSusChem, 2015, v. 8, n. 21, p. 3718, doi. 10.1002/cssc.201500194

By:

Hinks, Jamie;
Wang, Yaofeng;
Matysik, Artur;
Kraut, Rachel;
Kjelleberg, Staffan;
Mu, Yuguang;
Bazan, Guillermo C.;
Wuertz, Stefan;
Seviour, Thomas

Publication type:

Article

Reply to the comment on 'Energy landscape of a small peptide revealed by dihedral angle principal component analysis'.

Published in:

Proteins, 2006, v. 64, n. 3, p. 798, doi. 10.1002/prot.21038

By:

Mu, Yuguang;
Nguyen, Phuong;
Stock, Gerhard

Publication type:

Article

Structure and energy landscape of a photoswitchable peptide: A replica exchange molecular dynamics study.

Published in:

Proteins, 2005, v. 60, n. 3, p. 485, doi. 10.1002/prot.20485

By:

Nguyen, Phuong H.;
Mu, Yuguang;
Stock, Gerhard

Publication type:

Article

Energy landscape of a small peptide revealed by dihedral angle principal component analysis.

Published in:

Proteins, 2005, v. 58, n. 1, p. 45, doi. 10.1002/prot.20310

By:

Mu, Yuguang;
Nguyen, Phuong H.;
Stock, Gerhard

Publication type:

Article

Genomic, transcriptomic, and metabolomic analysis of Oldenlandia corymbosa reveals the biosynthesis and mode of action of anti‐cancer metabolites.

Published in:

Journal of Integrative Plant Biology, 2023, v. 65, n. 6, p. 1442, doi. 10.1111/jipb.13469

By:

Julca, Irene;
Mutwil‐Anderwald, Daniela;
Manoj, Vaishnervi;
Khan, Zahra;
Lai, Soak Kuan;
Yang, Lay K.;
Beh, Ing T.;
Dziekan, Jerzy;
Lim, Yoon P.;
Lim, Shen K.;
Low, Yee W.;
Lam, Yuen I.;
Tjia, Seth;
Mu, Yuguang;
Tan, Qiao W.;
Nuc, Przemyslaw;
Choo, Le M.;
Khew, Gillian;
Shining, Loo;
Kam, Antony

Publication type:

Article

Phospho‐regulation of intrinsically disordered proteins for actin assembly and endocytosis.

Published in:

FEBS Journal, 2018, v. 285, n. 15, p. 2762, doi. 10.1111/febs.14493

By:

Miao, Yansong;
Tipakornsaowapak, Teepiyanut;
Zheng, Liangzhen;
Mu, Yuguang;
Lewellyn, Eric

Publication type:

Article

Engineered Reactive Oxygen Species (ROS)‐Responsive Artificial H+/Cl− Ion Channels for Targeted Cancer Treatment.

Published in:

Angewandte Chemie, 2025, v. 137, n. 7, p. 1, doi. 10.1002/ange.202419800

By:

Jia, Chunyan;
Luo, Daoxin;
Zhou, Jin;
Xie, Xiaopan;
Yuen In Lam, Hilbert;
Li, Pengzhe;
Mu, Yuguang;
Zeng, Zhiping;
Ren, Changliang

Publication type:

Article

Concentration‐Driven Evolution of Adaptive Artificial Ion Channels or Nanopores with Specific Anticancer Activities.

Published in:

Angewandte Chemie, 2024, v. 136, n. 17, p. 1, doi. 10.1002/ange.202318811

By:

Chen, Zhiqing;
Xie, Xiaopan;
Jia, Chunyan;
Zhong, Qishuo;
Zhang, Qiuping;
Luo, Daoxin;
Cao, Yin;
Mu, Yuguang;
Ren, Changliang

Publication type:

Article

Global optimisation by replica exchange with scaled hybrid Hamiltonians.

Published in:

Molecular Simulation, 2008, v. 34, n. 6, p. 575, doi. 10.1080/08927020801947020

By:

Xu, Weixin;
Yang, Ye;
Mu, Yuguang;
Nordenskiold, Lars

Publication type:

Article

Protein language models are performant in structure-free virtual screening.

Published in:

Briefings in Bioinformatics, 2024, v. 25, n. 6, p. 1, doi. 10.1093/bib/bbae480

By:

Lam, Hilbert Yuen In;
Guan, Jia Sheng;
Ong, Xing Er;
Pincket, Robbe;
Mu, Yuguang

Publication type:

Article

RmsdXNA: RMSD prediction of nucleic acid-ligand docking poses using machine-learning method.

Published in:

Briefings in Bioinformatics, 2024, v. 25, n. 3, p. 1, doi. 10.1093/bib/bbae166

By:

Tan, Lai Heng;
Kwoh, Chee Keong;
Mu, Yuguang

Publication type:

Article

A new paradigm for applying deep learning to protein–ligand interaction prediction.

Published in:

Briefings in Bioinformatics, 2024, v. 25, n. 3, p. 1, doi. 10.1093/bib/bbae145

By:

Wang, Zechen;
Wang, Sheng;
Li, Yangyang;
Guo, Jingjing;
Wei, Yanjie;
Mu, Yuguang;
Zheng, Liangzhen;
Li, Weifeng

Publication type:

Article

A fully differentiable ligand pose optimization framework guided by deep learning and a traditional scoring function.

Published in:

Briefings in Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1093/bib/bbac520

By:

Wang, Zechen;
Zheng, Liangzhen;
Wang, Sheng;
Lin, Mingzhi;
Wang, Zhihao;
Kong, Adams Wai-Kin;
Mu, Yuguang;
Wei, Yanjie;
Li, Weifeng

Publication type:

Article

Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 3, p. 1, doi. 10.1093/bib/bbac051

By:

Zheng, Liangzhen;
Meng, Jintao;
Jiang, Kai;
Lan, Haidong;
Wang, Zechen;
Lin, Mingzhi;
Li, Weifeng;
Guo, Hongwei;
Wei, Yanjie;
Mu, Yuguang

Publication type:

Article

Weighted persistent homology for osmolyte molecular aggregation and hydrogen-bonding network analysis.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-66710-6

By:

Anand, D. Vijay;
Meng, Zhenyu;
Xia, Kelin;
Mu, Yuguang

Publication type:

Article

A polycationic antimicrobial and biocompatible hydrogel with microbe membrane suctioning ability.

Published in:

Nature Materials, 2011, v. 10, n. 2, p. 149, doi. 10.1038/nmat2915

By:

Peng Li;
Yin Fun Poon;
Weifeng Li;
Hong-Yuan Zhu;
Siew Hooi Yeap;
Ye Cao;
Xiaobao Qi;
Chuncai Zhou;
Lamrani, Mouad;
Beuerman, Roger W.;
En-Tang Kang;
Yuguang Mu;
Chang Ming Li;
Chang, Matthew W.;
Susanna Su Jan Leong;
Chan-Park, Mary B.

Publication type:

Article

Dynamically-Driven Inactivation of the Catalytic Machinery of the SARS 3C-Like Protease by the N214A Mutation on the Extra Domain.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 2, p. 1, doi. 10.1371/journal.pcbi.1001084

By:

Jiahai Shi;
Nanyu Han;
Liangzhong Lim;
Shixiong Lua;
Sivaraman, J.;
Lushan Wang;
Yuguang Mu;
Jianxing Song

Publication type:

Article

Amyloidogenesis Abolished by Proline Substitutions but Enhanced by Lipid Binding.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000357

By:

Ping Jiang;
Weixin Xu;
Yuguang Mu

Publication type:

Article

In Silico Repurposed Drugs against Monkeypox Virus.

Published in:

Molecules, 2022, v. 27, n. 16, p. 5277, doi. 10.3390/molecules27165277

By:

Lam, Hilbert Yuen In;
Guan, Jia Sheng;
Mu, Yuguang

Publication type:

Article

A Short Peptide Hydrogel with High Stiffness Induced by 310‐Helices to β‐Sheet Transition in Water.

Published in:

Advanced Science, 2019, v. 6, n. 21, p. N.PAG, doi. 10.1002/advs.201901173

By:

Hiew, Shu Hui;
Mohanram, Harini;
Ning, Lulu;
Guo, Jingjing;
Sánchez‐Ferrer, Antoni;
Shi, Xiangyan;
Pervushin, Konstantin;
Mu, Yuguang;
Mezzenga, Raffaele;
Miserez, Ali

Publication type:

Article

Polypyridine‐Based Helical Amide Foldamer Channels: Rapid Transport of Water and Protons with High Ion Rejection.

Published in:

Angewandte Chemie, 2020, v. 132, n. 32, p. 13430, doi. 10.1002/ange.202003512

By:

Shen, Jie;
Fan, Jingrong;
Ye, Ruijuan;
Li, Ning;
Mu, Yuguang;
Zeng, Huaqiang

Publication type:

Article

Release of frustration drives corneal amyloid disaggregation by brain chaperone.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-04725-1

By:

Low, Jia Yi Kimberly;
Shi, Xiangyan;
Anandalakshmi, Venkatraman;
Neo, Dawn;
Peh, Gary Swee Lim;
Koh, Siew Kwan;
Zhou, Lei;
Abdul Rahim, M. K.;
Boo, Ketti;
Lee, JiaXuan;
Mohanram, Harini;
Alag, Reema;
Mu, Yuguang;
Mehta, Jodhbir S.;
Pervushin, Konstantin

Publication type:

Article

Fimbrin phosphorylation by metaphase Cdk1 regulates actin cable dynamics in budding yeast.

Published in:

Nature Communications, 2016, v. 7, n. 4, p. 11265, doi. 10.1038/ncomms11265

By:

Miao, Yansong;
Han, Xuemei;
Zheng, Liangzhen;
Xie, Ying;
Mu, Yuguang;
Yates, John R.;
Drubin, David G.

Publication type:

Article

Exploring Flexibility of Progesterone Receptor Ligand Binding Domain Using Molecular Dynamics.

Published in:

PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0165824

By:

Zheng, Liangzhen;
Lin, Valerie Chunling;
Mu, Yuguang

Publication type:

Article