Works matching IS 1553734X AND DT 2023 AND VI 19 AND IP 10
Results: 67
Genome-scale metabolic modeling of the human gut bacterium Bacteroides fragilis strain 638R.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011594
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- Article
Correction: A spatial vaccination strategy to reduce the risk of vaccine-resistant variants.
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- 2023
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- Correction Notice
Deep convolutional and conditional neural networks for large-scale genomic data generation.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011584
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Correction: Individual-based model highlights the importance of trade-offs for virus-host population dynamics and long-term co-existence.
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- 2023
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- Correction Notice
Dose-response in modulating brain function with transcranial direct current stimulation: From local to network levels.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011572
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Correction: A quantitative modelling approach for DNA repair on a population scale.
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- 2023
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- Correction Notice
Correction: Hybrid predictive coding: Inferring, fast and slow.
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- 2023
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- Correction Notice
The role of leptomeningeal collaterals in redistributing blood flow during stroke.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011496
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Objects guide human gaze behavior in dynamic real-world scenes.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011512
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Bayesian modeling of the impact of antibiotic resistance on the efficiency of MRSA decolonization.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1010898
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Genes for highly abundant proteins in Escherichia coli avoid 5' codons that promote ribosomal initiation.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011581
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Correction: Intrinsic motivation for choice varies with individual risk attitudes and the controllability of the environment.
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- 2023
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- Correction Notice
Efficient multi-fidelity computation of blood coagulation under flow.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011583
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Recognition and reconstruction of cell differentiation patterns with deep learning.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011582
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Inference of transmission dynamics and retrospective forecast of invasive meningococcal disease.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011564
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Discovering individual-specific gait signatures from data-driven models of neuromechanical dynamics.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011556
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- Article
Merging short and stranded long reads improves transcript assembly.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011576
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Rapid automated 3-D pose estimation of larval zebrafish using a physical model-trained neural network.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011566
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Infer global, predict local: Quantity-relevance trade-off in protein fitness predictions from sequence data.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011521
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- Article
Spatial Configurations of 3D Extracellular Matrix Collagen Density and Anisotropy Simultaneously Guide Angiogenesis.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011553
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Refphase: Multi-sample phasing reveals haplotype-specific copy number heterogeneity.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011379
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Physical modeling of ribosomes along messenger RNA: Estimating kinetic parameters from ribosome profiling experiments using a ballistic model.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011522
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An integrated approach to the characterization of immune repertoires using AIMS: An Automated Immune Molecule Separator.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011577
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Analyzing histone ChIP-seq data with a bin-based probability of being signal.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011568
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Wall shear stress and pressure patterns in aortic stenosis patients with and without aortic dilation captured by high-performance image-based computational fluid dynamics.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011479
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Phi fluctuates with surprisal: An empirical pre-study for the synthesis of the free energy principle and integrated information theory.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011346
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Tissue Forge: Interactive biological and biophysics simulation environment.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1010768
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PARROT: Prediction of enzyme abundances using protein-constrained metabolic models.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011549
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Catalyst: Fast and flexible modeling of reaction networks.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011530
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Modelling how plant cell-cycle progression leads to cell size regulation.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011503
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Tracking bacteria at high density with FAST, the Feature-Assisted Segmenter/Tracker.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011524
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A recurrent neural network model of prefrontal brain activity during a working memory task.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011555
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AGouTI–Flexible Annotation of Genomic and Transcriptomic Intervals.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011527
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OpenCap: Human movement dynamics from smartphone videos.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011462
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Combining the dynamic model and deep neural networks to identify the intensity of interventions during COVID-19 pandemic.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011535
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Integrated information theory (IIT) 4.0: Formulating the properties of phenomenal existence in physical terms.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011465
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Distilling identifiable and interpretable dynamic models from biological data.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011014
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Reframing dopamine: A controlled controller at the limbic-motor interface.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011569
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Establishing brain states in neuroimaging data.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011571
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Pervasive, conserved secondary structure in highly charged protein regions.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011565
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A 2D model to study how secondary growth affects the self-supporting behaviour of climbing plants.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011538
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Lévy movements and a slowly decaying memory allow efficient collective learning in groups of interacting foragers.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011528
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Rational social distancing policy during epidemics with limited healthcare capacity.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011533
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Batch normalization followed by merging is powerful for phenotype prediction integrating multiple heterogeneous studies.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1010608
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Conserved and divergent signals in 5' splice site sequences across fungi, metazoa and plants.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011540
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Reproducibility of biophysical in silico neuron states and spikes from event-based partial histories.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011548
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Temperature sensitive contact modes allosterically gate TRPV3.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011545
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Short-term neuronal and synaptic plasticity act in synergy for deviance detection in spiking networks.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011554
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Improving deep models of protein-coding potential with a Fourier-transform architecture and machine translation task.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011526
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Phertilizer: Growing a clonal tree from ultra-low coverage single-cell DNA sequencing of tumors.
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- PLoS Computational Biology, 2023, v. 19, n. 10, p. 1, doi. 10.1371/journal.pcbi.1011544
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- Article