Works matching IS 1553734X AND DT 2019 AND VI 15 AND IP 3
Results: 67
Bayes-optimal estimation of overlap between populations of fixed size.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006898
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Bayesian inference of transmission chains using timing of symptoms, pathogen genomes and contact data.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006930
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Agent-based modeling of morphogenetic systems: Advantages and challenges.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006577
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Ten principles for machine-actionable data management plans.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006750
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A computational framework To assess genome-wide distribution Of polymorphic human endogenous retrovirus-K In human populations.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006564
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Review: Precision medicine and driver mutations: Computational methods, functional assays and conformational principles for interpreting cancer drivers.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006658
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Scalable nonlinear programming framework for parameter estimation in dynamic biological system models.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006828
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Evaluating reproducibility of AI algorithms in digital pathology with DAPPER.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006269
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LMTRDA: Using logistic model tree to predict MiRNA-disease associations by fusing multi-source information of sequences and similarities.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006865
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Conformational ensemble of native α-synuclein in solution as determined by short-distance crosslinking constraint-guided discrete molecular dynamics simulations.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006859
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Searching algorithm for Type IV effector proteins (S4TE) 2.0: Improved tools for Type IV effector prediction, analysis and comparison in proteobacteria.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006847
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Synchrony is more than its top-down and climatic parts: interacting Moran effects on phytoplankton in British seas.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006744
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Identification of pathways associated with chemosensitivity through network embedding.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006864
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ChIPulate: A comprehensive ChIP-seq simulation pipeline.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006921
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ZnT2 is an electroneutral proton-coupled vesicular antiporter displaying an apparent stoichiometry of two protons per zinc ion.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006882
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An agent-based model of dengue virus transmission shows how uncertainty about breakthrough infections influences vaccination impact projections.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006710
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Contrasting the effects of adaptation and synaptic filtering on the timescales of dynamics in recurrent networks.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006893
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Rapid interpretation of small-angle X-ray scattering data.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006900
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Modeling second-order boundary perception: A machine learning approach.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006829
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Endemicity and prevalence of multipartite viruses under heterogeneous between-host transmission.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006876
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Stochastic neural field model of stimulus-dependent variability in cortical neurons.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006755
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Self-organization of conducting pathways explains electrical wave propagation in cardiac tissues with high fraction of non-conducting cells.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006597
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Building a mechanistic mathematical model of hepatitis C virus entry.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006905
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Boolean model of growth signaling, cell cycle and apoptosis predicts the molecular mechanism of aberrant cell cycle progression driven by hyperactive PI3K.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006402
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Understanding narwhal diving behaviour using Hidden Markov Models with dependent state distributions and long range dependence.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006425
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The logic of ionic homeostasis: Cations are for voltage, but not for volume.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006894
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A spatio-temporal individual-based network framework for West Nile virus in the USA: Spreading pattern of West Nile virus.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006875
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Optimizing the depth and the direction of prospective planning using information values.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006827
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Synaptic plasticity onto inhibitory neurons as a mechanism for ocular dominance plasticity.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006834
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Spike burst-pause dynamics of Purkinje cells regulate sensorimotor adaptation.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006298
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Myopic control of neural dynamics.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006854
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Pan-cancer association of a centrosome amplification gene expression signature with genomic alterations and clinical outcome.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006832
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The number of active metabolic pathways is bounded by the number of cellular constraints at maximal metabolic rates.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006858
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A complete statistical model for calibration of RNA-seq counts using external spike-ins and maximum likelihood theory.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006794
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Latent goal models for dynamic strategic interaction.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006895
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Modeling differentiation-state transitions linked to therapeutic escape in triple-negative breast cancer.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006840
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Effectiveness of Ultra-Low Volume insecticide spraying to prevent dengue in a non-endemic metropolitan area of Brazil.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006831
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Quantitative agent-based modeling reveals mechanical stress response of growing tumor spheroids is predictable over various growth conditions and cell lines.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006273
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A spectrum of routing strategies for brain networks.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006833
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Methods for computing the maximum performance of computational models of fMRI responses.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006397
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A dynamic power-law sexual network model of gonorrhoea outbreaks.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006748
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OptRAM: In-silico strain design via integrative regulatory-metabolic network modeling.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006835
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How adaptive plasticity evolves when selected against.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006260
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A demonstration of modularity, reuse, reproducibility, portability and scalability for modeling and simulation of cardiac electrophysiology using Kepler Workflows.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006856
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A stochastic simulation of skeletal muscle calcium transients in a structurally realistic sarcomere model using MCell.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006712
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Predicting proteome allocation, overflow metabolism, and metal requirements in a model acetogen.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006848
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Estimating the number of genetic mutations (hits) required for carcinogenesis based on the distribution of somatic mutations.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006881
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Predicting the mechanism and rate of H-NS binding to AT-rich DNA.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006845
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A theoretical single-parameter model for urbanisation to study infectious disease spread and interventions.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006879
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An enriched network motif family regulates multistep cell fate transitions with restricted reversibility.
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- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006855
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